FC932138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932138 vs. ExPASy Swiss-Prot
Match: RS6_ASHGO (40S ribosomal protein S6 OS=Ashbya gossypii GN=RPS6 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.002e-24 Identity = 69/175 (39.43%), Postives = 93/175 (53.14%), Query Frame = 1 Query: 1 QGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRSRL 525 QGVL P RV+LL+ +GT C+ IV PDL+VL L+I KKG+ ++ G+T+ P+ GPKRA+ IRK F L+K+DDVR +V R K K +KAPKIQRLVTP L EY +LLA RL E++ ++E ++ S L Sbjct: 65 QGVLLPTRVKLLMAKGTSCYRPRRNGERKRKSVRG--AIVGPDLAVLALIITKKGDQEIEGITNESVPKRLGPKRANNIRKFFGLTKDDDVRDFV---IRREVVKGDKTYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQAQREAAAEYAQLLAKRLTEKKAEKAEERKRRASSL 234
BLAST of FC932138 vs. ExPASy Swiss-Prot
Match: RS6_DICDI (40S ribosomal protein S6 OS=Dictyostelium discoideum GN=rps6 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.232e-24 Identity = 72/171 (42.11%), Postives = 91/171 (53.22%), Query Frame = 1 Query: 1 QGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKK 513 QGV P RVRLLL + CF CIV+ D++ L L+IVKKG+ ++PGLTD P +GPKRAS IRKLF LSK++DVR +V R T K SKAPKIQRLVTP T+ EY KL+A R + + +R + +KK Sbjct: 65 QGVGAPTRVRLLLDGRSGCFKPSRDGERKRKSVRG--CIVAEDIASLQLIIVKKGDAEIPGLTDVSFPASKGPKRASNIRKLFKLSKDEDVRSFV-IRRELPATDKRKAKSKAPKIQRLVTPTTVARRKALRAKKAARHTKASNEAAEYAKLVAQRQQAKAKRSVKVSSKK 232
BLAST of FC932138 vs. ExPASy Swiss-Prot
Match: RS6_LEIMA (40S ribosomal protein S6 OS=Leishmania major GN=RPS6 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 64/163 (39.26%), Postives = 85/163 (52.15%), Query Frame = 1 Query: 4 GVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVS-KAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRER 489 GVL RV LL+ RG F C+++ D++++N+ I K G+ + G+TDT PR GPKRASKIRKLFNLS+ +DVRKYV R K+GKK KAPKIQRL+TP EY +L+A+ + R+R Sbjct: 67 GVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRR---VVKSGKKDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIASNRRALRQR 226
BLAST of FC932138 vs. ExPASy Swiss-Prot
Match: RS6_LEIIN (40S ribosomal protein S6 OS=Leishmania infantum GN=RPS6 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 64/163 (39.26%), Postives = 85/163 (52.15%), Query Frame = 1 Query: 4 GVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVS-KAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRER 489 GVL RV LL+ RG F C+++ D++++N+ I K G+ + G+TDT PR GPKRASKIRKLFNLS+ +DVRKYV R K+GKK KAPKIQRL+TP EY +L+A+ + R+R Sbjct: 67 GVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRR---VVKSGKKDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIASNRRALRQR 226 The following BLAST results are available for this feature:
BLAST of FC932138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932138 ID=FC932138; Name=FC932138; organism=Citrus clementina; type=EST; length=691bpback to top |