FC932143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: ARR19_ARATH (Putative two-component response regulator ARR19 OS=Arabidopsis thaliana GN=ARR19 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 2.716e-24 Identity = 55/125 (44.00%), Postives = 84/125 (67.20%), Query Frame = 2 Query: 179 QFPAGLRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRKR 553 QFP VLVVD + T L ++++++ Y+V+ AE AL L + K+ +IVI D HMP +DG + L+ + ++DLPV++MS D+ + VMK +GACDY++KPV+ E + NIW+H+VRKR Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRKR 153
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: ARR20_ARATH (Putative two-component response regulator ARR20 OS=Arabidopsis thaliana GN=ARR20 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.690e-23 Identity = 61/157 (38.85%), Postives = 91/157 (57.96%), Query Frame = 2 Query: 197 RVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRKR--KNEWKDLEQSGSVEEGDRQPKPSEEADYSSSANEGN 661 RVL+V D L+ ++ Y+VTK E A+ L NK+ D+VI D HMPD++G L +G +MDLPV++MS + K+ VM+ + +GACD+L+KPV E + +WRHV RKR K+ +SG+VE + E+ + S EG+ Sbjct: 42 RVLLVGADSNSS--LKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDINGLDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRMSKSGLDKPGESGTVESDPDEYDDLEQDNLYESNEEGS 196
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.671e-21 Identity = 56/159 (35.22%), Postives = 91/159 (57.23%), Query Frame = 2 Query: 194 LRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEM---DLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRKRKNEWKDLEQSGSVEEGDRQPKPSEEADYSSSANEGN 661 LRVL+V++D + +++ +LR C YEV A L +N D+V+++V MP + G LL ++ D+PVIMMS++DS V K ++ GA D+L+KP+R LKN+W+HV R+ + +SG + +PK +E + +S +N N Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIRTQKCTKPKVDDEYENNSGSNNDN 239
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 3.671e-21 Identity = 56/159 (35.22%), Postives = 91/159 (57.23%), Query Frame = 2 Query: 194 LRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEM---DLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRKRKNEWKDLEQSGSVEEGDRQPKPSEEADYSSSANEGN 661 LRVL+V++D + +++ +LR C YEV A L +N D+V+++V MP + G LL ++ D+PVIMMS++DS V K ++ GA D+L+KP+R LKN+W+HV R+ + +SG + +PK +E + +S +N N Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIRTQKCTKPKVDDEYENNSGSNNDN 239
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.068e-20 Identity = 51/157 (32.48%), Postives = 93/157 (59.24%), Query Frame = 2 Query: 194 LRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQV---GLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRKRKNEWKDLEQSGSVEEGDRQPKPSEEADYSSSANE 655 ++VL+VD D + +++ +LR C+YEV + A L +N D+V+++V MP + G LL ++ + ++PVIMMS++D+ V K ++ GA D+L+KP+R LKN+W+HV R+ + +SG + + K +E++ +S +N+ Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNSGSND 218
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.379e-20 Identity = 50/157 (31.85%), Postives = 93/157 (59.24%), Query Frame = 2 Query: 194 LRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQV---GLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRKRKNEWKDLEQSGSVEEGDRQPKPSEEADYSSSANE 655 ++VL+VD D + +++ +LR C+YEV + A L +N D+V+++V MP + G LL ++ + ++PVIMMS++D+ V K ++ GA D+L+KP+R LKN+W+HV R+ + +SG + + K +E++ ++ +N+ Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNNGSND 218
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: APRR9_ARATH (Two-component response regulator-like APRR9 OS=Arabidopsis thaliana GN=APRR9 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.227e-18 Identity = 47/122 (38.52%), Postives = 78/122 (63.93%), Query Frame = 2 Query: 194 LRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLE---MDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRK 550 LRVL+V+ D + +I+ +LR C Y+V + A ++L+ + D++++++ +P + GF LL V ++PVIMMS+ DS ++V+K + GA DYLIKP+R LKN+W+HV R+ Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 158
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: APRR3_ARATH (Two-component response regulator-like APRR3 OS=Arabidopsis thaliana GN=APRR3 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.480e-18 Identity = 52/157 (33.12%), Postives = 92/157 (58.60%), Query Frame = 2 Query: 194 LRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDL---PVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRKRKNEWKDLEQSGSVEEGDRQPKPSEEADYSSSANE 655 L+VL+V++D + I+ +L+ C YEVT A +L K+ D+V+++V MP G LL ++ L PVIMMS+ DS +V K +++GA D+L+KP+R LKN+W+HV R+ + +SG ++ +P+ ++ ++ +S ++ Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTQGSENDASISD 220
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: PRR95_ORYSJ (Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica GN=PRR95 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.462e-17 Identity = 48/124 (38.71%), Postives = 76/124 (61.29%), Query Frame = 2 Query: 194 LRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMD----LPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRKR 553 +RVL+ + D + I+ +LR C Y V + A D+L+ D+V+++V +P M GF LL + +E D +PVIMMS++DS +V K + GA D+L+KP+R L+N+W+HV RK+ Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMSGFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRKQ 165
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: APRR5_ARATH (Two-component response regulator-like APRR5 OS=Arabidopsis thaliana GN=APRR5 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.462e-17 Identity = 53/166 (31.93%), Postives = 85/166 (51.20%), Query Frame = 2 Query: 194 LRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDL----PVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRKRKN------EWKDLEQSGSVEEGDRQPKPSEEADYSSSANEGN 661 LRVL+V+ D + +I+ +LR C Y V A +ML+ D+++++V +P + G+ LL + +E D+ PVIMMS DS V K + GA DYL+KP+R L+N+W+HV R++ + W + E + D+ S N G+ Sbjct: 50 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSISGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQHVWRRQTSLAPDSFPWNESVGQQKAEGASANNSNGKRDDHVVSGNGGD 214 The following BLAST results are available for this feature:
BLAST of FC932143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932143 ID=FC932143; Name=FC932143; organism=Citrus clementina; type=EST; length=668bpback to top |