FC932143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: APRR1_ARATH (Two-component response regulator-like APRR1 OS=Arabidopsis thaliana GN=APRR1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.216e-17 Identity = 46/124 (37.10%), Postives = 71/124 (57.26%), Query Frame = 2 Query: 194 LRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDL---PVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRKRK 556 +R+L+ D+D T L + +L C Y+VT A +D L DI+++++ +P G K+L + + DL PVIMMS D VV+K + GA DYL+KP+R L N+W H+ R+R+ Sbjct: 19 VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRR 142
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: APRR7_ARATH (Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.200e-17 Identity = 53/160 (33.12%), Postives = 93/160 (58.13%), Query Frame = 2 Query: 194 LRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQV---GLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRKRKNEWKDLEQSGSVE-EGDRQPKPSEEADYSSSANEGN 661 +RVL+V++D I+ +LR C YEV + + A +L N DIV+++V MP + G LL ++ ++PVIMMS+ DS +V K ++ GA D+L+KP+R LK +W+HV R+ ++ +SG+ + + + K +++D S +++ N Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRRCQSSSGSGSESGTHQTQKSVKSKSIKKSDQDSGSSDEN 237
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: PRR1_ORYSJ (Two-component response regulator-like PRR1 OS=Oryza sativa subsp. japonica GN=PRR1 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.556e-16 Identity = 43/124 (34.68%), Postives = 73/124 (58.87%), Query Frame = 2 Query: 194 LRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDL---PVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRKRK 556 +R+L+ D DP+ R + ++L C Y+VT +++L DI++++V +P FK+L+ + +L P+IMMS D VV+K + GA +YL+KP+R+ L N+W HV R+R+ Sbjct: 28 VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRRR 151
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: ARR21_ARATH (Putative two-component response regulator ARR21 OS=Arabidopsis thaliana GN=ARR21 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.826e-12 Identity = 41/138 (29.71%), Postives = 79/138 (57.25%), Query Frame = 2 Query: 194 LRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEM-DLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRKRKNEWKDLEQSGSVEEGD 604 + V+VVDDD L I+ +ML+ Y V + + AL L+ ++ D++I+D +MP M+G +L +Q+ E +LPV++MS+D +K+ + ++ GA ++ KP+ L I++ + ++N L + ++ D Sbjct: 16 INVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDNIDLIITDYYMPGMNGLQLKKQITQEFGNLPVLVMSSDTNKE--EESLSCGAMGFIPKPIHPTDLTKIYQFALSNKRNGKSTLSTEQNHKDAD 151
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: PDE2_DICDI (3',5'-cyclic-nucleotide phosphodiesterase regA OS=Dictyostelium discoideum GN=regA PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.385e-12 Identity = 50/156 (32.05%), Postives = 81/156 (51.92%), Query Frame = 2 Query: 185 PAGLRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVG---LEMDLPVIMMS--ADDSKQVVMKGVTHGACDYLIKPVRIEALK----NIWRHVVRKRKNEWKDLEQSGSVEEGDRQPKPSE 625 P+ +R+LV DDD +IL +L+ Y VT EIA + + + YD+V++DV MP + GF LL+++ + +PVI+MS A D K + G D+L KP+ E LK + + + ++RK E + E+G++ K E Sbjct: 157 PSKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYK-YANDTIKIGGQDFLTKPIAKELLKKKIDTVLQSIWQRRKEEEYKATLAQEREKGNKLAKEME 311
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: ZRAR_ECOLI (Transcriptional regulatory protein zraR OS=Escherichia coli (strain K12) GN=zraR PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.019e-11 Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = 2 Query: 200 VLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQV-GLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALK 523 +LVVDDD + IL+ +LR Y V N AL+ +R + +D+V+ DV M +MDG L+++ L +PV++M+A S + ++ + GA DYLIKP+ + L+ Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVR--EQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: ZRAR_ECO57 (Transcriptional regulatory protein zraR OS=Escherichia coli O157:H7 GN=zraR PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.019e-11 Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = 2 Query: 200 VLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQV-GLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALK 523 +LVVDDD + IL+ +LR Y V N AL+ +R + +D+V+ DV M +MDG L+++ L +PV++M+A S + ++ + GA DYLIKP+ + L+ Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVR--ERVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: NISR_LACLA (Nisin biosynthesis regulatory protein nisR OS=Lactococcus lactis subsp. lactis GN=nisR PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.019e-11 Identity = 33/123 (26.83%), Postives = 74/123 (60.16%), Query Frame = 2 Query: 197 RVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEAL-KNIWRHVVRKRKNE 562 ++L+VDDD L++++ L YEV + LD+ T+ G+D+++ D+ M +++G ++ +++ E+ P+I +SA D+++ ++ G+ G DY+ KP ++ L + ++ R+ +N+ Sbjct: 4 KILIVDDDQEILKLMKTALEMRNYEVATHQNISLPLDI--TDFQGFDLILLDIMMSNIEGTEICKRIRREISTPIIFVSAKDTEEDIINGLGIGGDDYITKPFSLKQLVAKVEANIKREERNK 124
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: SPAR_BACSU (Transcriptional regulatory protein spaR OS=Bacillus subtilis GN=spaR PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.444e-11 Identity = 37/127 (29.13%), Postives = 72/127 (56.69%), Query Frame = 2 Query: 197 RVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNK----NGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALK-NIWRHVVRKRKNE 562 ++L VDD+ L +++ +LR ++V LD + GYD+++ DV MPD+DGF+L +Q+ +D P++ ++A ++ ++KG+ G DY+ KP + L + H+ R+R+++ Sbjct: 3 KILAVDDEKDILVLIQNILRRDQHQVD-------ILDHVHGQPPDVFQGYDLILLDVMMPDIDGFELCKQIRPLVDCPILFLTAKTEEEAIVKGLITGGDDYITKPFGVRELSARVNAHLRRERRDK 122
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: YCF27_PORPU (Probable transcriptional regulator ycf27 OS=Porphyra purpurea GN=ycf27 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.498e-11 Identity = 42/118 (35.59%), Postives = 68/118 (57.63%), Query Frame = 2 Query: 197 RVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRK 550 ++LVVDD+ + RILE L YEV + E AL + R K +V+ DV MP +DG+ + +++ E D+P+IM++A + G+ GA DY++KP + L+ R V+R+ Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALIIFR--KEYPSLVVLDVMMPKLDGYGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122 The following BLAST results are available for this feature:
BLAST of FC932143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932143 ID=FC932143; Name=FC932143; organism=Citrus clementina; type=EST; length=668bpback to top |