FC932143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: RCSC_SALTI (Sensor protein rcsC OS=Salmonella typhi GN=rcsC PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.498e-11 Identity = 44/125 (35.20%), Postives = 73/125 (58.40%), Query Frame = 2 Query: 194 LRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQV-GLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKN---IWRHVVRKRK 556 + +LVVDD P R+L L + Y+ N AL++L +KN DIV+SDV+MP+MDG++L +++ L + LPV+ ++A+ + + + G L KPV ++ALK ++ VRK + Sbjct: 825 MMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL--SKNAIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTLDALKQTLAVYAERVRKTR 947
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: YCF27_PORYE (Probable transcriptional regulator ycf27 OS=Porphyra yezoensis GN=ycf27 PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 42/118 (35.59%), Postives = 68/118 (57.63%), Query Frame = 2 Query: 197 RVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRK 550 ++LVVDD+ + RILE L YEV + E AL + R K +V+ DV MP +DG+ + +++ E D+P+IM++A + G+ GA DY++KP + L+ R V+R+ Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALLVFR--KEYPSLVVLDVMMPKLDGYGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: MPRA_MYCTU (Response regulator mprA OS=Mycobacterium tuberculosis GN=mprA PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.672e-11 Identity = 44/124 (35.48%), Postives = 69/124 (55.65%), Query Frame = 2 Query: 194 LRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQV-GLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRKRKNE 562 +R+LVVDDD L + L Y V + ALDM+ +++ D ++ DV MP +DG ++ Q+ G DLP+++++A DS + G+ GA DYL KP +E L R ++R+ K E Sbjct: 3 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRP--DALVLDVMMPRLDGLEVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTKPE 124
BLAST of FC932143 vs. ExPASy Swiss-Prot
Match: MPRA_MYCTA (Response regulator mprA OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mprA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.672e-11 Identity = 44/124 (35.48%), Postives = 69/124 (55.65%), Query Frame = 2 Query: 194 LRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISDVHMPDMDGFKLLEQV-GLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWRHVVRKRKNE 562 +R+LVVDDD L + L Y V + ALDM+ +++ D ++ DV MP +DG ++ Q+ G DLP+++++A DS + G+ GA DYL KP +E L R ++R+ K E Sbjct: 3 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRP--DALVLDVMMPRLDGLEVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTKPE 124 The following BLAST results are available for this feature:
BLAST of FC932143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932143 ID=FC932143; Name=FC932143; organism=Citrus clementina; type=EST; length=668bpback to top |