FC932146

Overview
NameFC932146
Unique NameFC932146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.263e-39
Identity = 81/217 (37.33%), Postives = 128/217 (58.99%), Query Frame = 1
Query:   46 EEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFL----EQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVLP 684
            EEW  D S+L +G +   G    ++RGI+    VA+K+      +++  A+  + F +E+++LSRL HPN++ F+ AC KPP   +ITEYM  G+L   ++   +   LS     ++  DI RG+  +H   ++HRDLKS N L+N    VK+ DFG S + T        + GT  WMAPE+I+ +P+T K D++S G+++WEL T   P++G+ P
Sbjct:   77 EEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTHKEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNKK-EPYSLSIETVLRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQC-REAKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTP 291          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: SHKD_DICDI (Dual specificity protein kinase shkD OS=Dictyostelium discoideum GN=shkD PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.115e-38
Identity = 77/194 (39.69%), Postives = 124/194 (63.92%), Query Frame = 1
Query:   91 VGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRM-KIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPW 669
            +G G FG V++G   G +VA+K+  +Q L+   +  F +E+ I+S++ HPNV+LFLGACT+  ++ ++TE  +   L  L+H    KK+ S  R+ +M +D   G+  +H + +IVH DLK+AN LV+ +  VK+ DFG S+I      +D ++ GTP WMAPE++   P+ EK D++S G+I+WE+ T   P+
Sbjct:  283 LGQGSFGSVYKGKCRGQEVAVKIPRKQKLSLYELTSFRHEVKIMSKIFHPNVVLFLGACTQSGKMQIVTELCQT-DLEKLLHNDRTKKEFSLFRRMQMAKDAALGMNWLHGITRIVHNDLKTANLLVDINLRVKVTDFGFSQIKEGEEFQDKAAKGTPLWMAPEVMMGNPYNEKADVYSFGIILWEILTKEAPY 475          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: Y9871_DICDI (Probable serine/threonine-protein kinase DDB_G0271682 OS=Dictyostelium discoideum GN=DDB_G0271682 PE=3 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 8.038e-38
Identity = 86/220 (39.09%), Postives = 131/220 (59.55%), Query Frame = 1
Query:   22 QNKPLLAYE--EWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMK--IVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSS-AGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRP 666
            +N P++  +  + NI  +EL    ++G G  GEV +  W GT VA+K   +  L  +  E+F  E+SIL  LRHPNV+LF+G C     L++ITEY+  GSL  ++  +  K +LS   K KML D+ +G+  +H     I+HRDLKS N LV+ ++ VK+ DFGLSR I+      + +  GT  W+APE+     +T K D++S G+++WE+ T  +P
Sbjct:  341 ENTPVIVEDSLKLNIQENELLFIKKIGSGACGEVCQYEWKGTPVAVKTIFKSLLRKDKKEEFEKEVSILKCLRHPNVVLFMGTCLLNGNLAIITEYLNRGSLRDVL-TTMNKSELSLSVKVKMLIDVAQGMNYLHTYSPPIIHRDLKSLNLLVDNNFNVKVSDFGLSRFISGGIGSSAKTFCGTLSWIAPEVFNGSGYTTKVDVYSFGIVLWEILTHKQP 559          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: PYK3_DICDI (Dual specificity protein kinase pyk3 OS=Dictyostelium discoideum GN=pyk3 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.050e-37
Identity = 81/207 (39.13%), Postives = 127/207 (61.35%), Query Frame = 1
Query:   58 IDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            I F E+ +  +VG G F  VF GIWNG  VAIK+   + ++  N E F  E+S L +  HPNV+ F+GAC  PP   + TEY++ GSLY ++H+  QK KL+    +KM+ D+  G+  +H ++++HRDL S N L+++   +KI DFGL+  ++D      S    P W +PEL +   + EK D++S G++++E+ T   P+EG+
Sbjct: 1052 IKFDEVAIVEKVGAGSFANVFLGIWNGYKVAIKILKNESIS--NDEKFIKEVSSLIKSHHPNVVTFMGACIDPP--CIFTEYLQGGSLYDVLHI--QKIKLNPLMMYKMIHDLSLGMEHLHSIQMLHRDLTSKNILLDEFKNIKIADFGLATTLSDD--MTLSGITNPRWRSPELTKGLVYNEKVDVYSFGLVVYEIYTGKIPFEGL 1250          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: M313A_XENLA (Mitogen-activated protein kinase kinase kinase 13-A OS=Xenopus laevis GN=map3k13-A PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.826e-36
Identity = 89/211 (42.18%), Postives = 119/211 (56.40%), Query Frame = 1
Query:   46 EEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            E W + F E++    +G G  G VF G + G +VAIK   EQ  T         +I  L +L+HPN+I F G CT+ P   +I EY   G LY ++      +K+S R        I  G+  +H  KI+HRDLKS N LV    TVKI DFG S+ ++D   +  S AGT  WMAPE+IRNEP +EK DI+S GV++WEL T   P++ V
Sbjct:  160 ETWEVPFEEISELQWLGSGAQGAVFLGKFRGEEVAIKKVREQKET---------DIKHLRKLKHPNIIAFKGVCTQAPCYCLIMEYCAHGQLYEVLRAG---RKVSPRLLVDWSNGIASGMNYLHLHKIIHRDLKSPNVLVTHTDTVKISDFGTSKELSDKSTK-MSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVLLWELLTGEIPYKDV 357          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: Y9847_DICDI (Probable serine/threonine-protein kinase DDB_G0267686 OS=Dictyostelium discoideum GN=DDB_G0267686 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.283e-35
Identity = 84/215 (39.07%), Postives = 123/215 (57.21%), Query Frame = 1
Query:   10 SPMFQNKPLLAYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMK--IVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWEL 648
            S     K L+ +  W ID  E+    ++G G   +V+R  W   +VA+KV L  +  ++ + DF  E+ I+S LR P+V+ F G    P ++ MI EY    +LYHL+HL   +   +W   FK   ++ RG+ C+H  K  IVHRDLKS N LV+ +WT+K+ DFGLSR  T     + ++ GT  + APE+      T K DIFS+G+I+WEL
Sbjct: 1928 SQELDTKVLMNFNNWAIDGEEIVFLNKLGEGTSAKVYRATWRNQEVAVKV-LRSEPESQKLLDFLKELEIMSSLRSPHVVYFYGMVLDP-KICMIMEYCSNQTLYHLMHL---QMNFTWDWVFKFAIEMVRGVNCLHSWKPVIVHRDLKSLNLLVSDNWTIKVADFGLSRFATAKSASNRTTRGTFAYCAPEVFYG-IHTTKGDIFSIGIILWEL 2136          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: SHKC_DICDI (Dual specificity protein kinase shkC OS=Dictyostelium discoideum GN=shkC PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.189e-35
Identity = 82/208 (39.42%), Postives = 127/208 (61.06%), Query Frame = 1
Query:   58 IDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMK--IVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPM-RDSSSA-GTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPW 669
            I+F EL     +G G FG+V++G      VA+K+  +Q+  A  +  F  E+ ++S++ HPN+ LF+GACT P R  ++TE +  G+L  L+H   QK +L    + +M RD   G+  +H      VHRD+KS+N LV+++  VKICDFGLS +     M +D SSA GTP +MAPE++  + F E  D++S G+++WE+ T   P+
Sbjct:   24 INFEEL-----IGTGSFGKVYKGRCRQKAVAVKLLHKQNFDAATLSAFRKEVHLMSKIYHPNICLFMGACTIPGRCVIVTELVPKGNLETLLH--DQKIQLPLYLRMRMARDAALGINWLHESNPVFVHRDIKSSNLLVDENMRVKICDFGLSALKQKHKMLKDQSSAKGTPLYMAPEVMMFKEFNESSDVYSFGIVLWEILTRKEPF 224          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: RAF1_RAT (RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus GN=Raf1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.086e-34
Identity = 78/214 (36.45%), Postives = 130/214 (60.75%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIIT--DSPMRDSSSAGTPEWMAPELIR---NEPFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            W I+ SE+ + TR+G G FG V++G W+G DVA+K+    D T E ++ F NE+++L + RH N++LF+G  TK   L+++T++ E  SLY  +H+  Q+ K    +   + R   +G+  +H   I+HRD+KS N  +++  TVKI DFGL+ + +      +     G+  WMAPE+IR   N PF+ + D++S G++++EL T   P+  +
Sbjct:  342 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHV--QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 551          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: M313B_XENLA (Mitogen-activated protein kinase kinase kinase 13-B OS=Xenopus laevis GN=map3k13-B PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.419e-34
Identity = 85/211 (40.28%), Postives = 120/211 (56.87%), Query Frame = 1
Query:   46 EEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            + W + F E++    +G G  G VF G + G +VAIK   EQ  T         +I  L +L+HPN+I F G CT+ P   ++ EY   G LY ++      +K++ +   +    I  G+  +H  KI+HRDLKS N LV    TVKI DFG S+ ++D   +  S AGT  WMAPE+IRNEP +EK DI+S GV++WEL T   P++ V
Sbjct:  162 DTWEVPFEEISELQWLGSGAQGAVFLGKFRGEEVAIKKVREQKET---------DIKHLRKLKHPNIIAFKGVCTQAPCYCILMEYCAQGQLYEVLRAG---RKVTPKLLVEWSTGIASGMNYLHLHKIIHRDLKSPNVLVTHADTVKISDFGTSKELSDKSTK-MSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVLLWELLTGEIPYKDV 359          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: RAF1_PONAB (RAF proto-oncogene serine/threonine-protein kinase OS=Pongo abelii GN=RAF1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34
Identity = 78/214 (36.45%), Postives = 129/214 (60.28%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIIT--DSPMRDSSSAGTPEWMAPELIR---NEPFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            W I+ SE+ + TR+G G FG V++G W+G DVA+K+    D T E  + F NE+++L + RH N++LF+G  TK   L+++T++ E  SLY  +H+  Q+ K    +   + R   +G+  +H   I+HRD+KS N  +++  TVKI DFGL+ + +      +     G+  WMAPE+IR   N PF+ + D++S G++++EL T   P+  +
Sbjct:  342 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHV--QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 551          
The following BLAST results are available for this feature:
BLAST of FC932146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HT1_ARATH3.263e-3937.33Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
SHKD_DICDI2.115e-3839.69Dual specificity protein kinase shkD OS=Dictyostel... [more]
Y9871_DICDI8.038e-3839.09Probable serine/threonine-protein kinase DDB_G0271... [more]
PYK3_DICDI1.050e-3739.13Dual specificity protein kinase pyk3 OS=Dictyostel... [more]
M313A_XENLA9.826e-3642.18Mitogen-activated protein kinase kinase kinase 13-... [more]
Y9847_DICDI1.283e-3539.07Probable serine/threonine-protein kinase DDB_G0267... [more]
SHKC_DICDI2.189e-3539.42Dual specificity protein kinase shkC OS=Dictyostel... [more]
RAF1_RAT1.086e-3436.45RAF proto-oncogene serine/threonine-protein kinase... [more]
M313B_XENLA1.419e-3440.28Mitogen-activated protein kinase kinase kinase 13-... [more]
RAF1_PONAB1.853e-3436.45RAF proto-oncogene serine/threonine-protein kinase... [more]

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Properties
Property NameValue
Genbank descriptionC34205B05EF PostHarveN Citrus clementina cDNA clone C34205B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932146 ID=FC932146; Name=FC932146; organism=Citrus clementina; type=EST; length=698bp
GTTTTGGAATCTCCCATGTTCCAGAATAAACCTTTATTAGCTTATGAGGA
ATGGAACATTGACTTCTCTGAATTAACTGTGGGAACTCGTGTTGGAATTG
GTTTTTTCGGAGAAGTTTTTCGTGGCATATGGAATGGTACAGATGTTGCA
ATCAAGGTTTTCTTGGAGCAAGATCTAACAGCAGAAAACATGGAAGACTT
TTGCAATGAGATATCTATTCTAAGTCGTCTTCGGCATCCTAATGTTATCT
TATTTTTGGGTGCTTGCACAAAGCCTCCACGATTGTCAATGATTACTGAA
TACATGGAGCTGGGGTCCTTGTACCATTTGATTCATTTGAGTGGTCAAAA
AAAGAAGCTTAGCTGGAGGAGAAAATTTAAAATGCTACGTGATATATGCA
GGGGTTTGATGTGCATACACCGAATGAAGATAGTCCATCGTGACTTAAAA
AGTGCAAACTGTCTTGTGAATAAACACTGGACTGTCAAGATATGTGATTT
TGGGCTATCGAGAATAATAACGGACTCACCCATGAGAGACTCCTCATCTG
CTGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGCAATGAACCCTTC
ACAGAAAAATGTGATATTTTTAGCCTTGGGGTCATAATGTGGGAGCTCTG
CACTCTAAATAGACCATGGGAAGGTGTACTACCAGAAGGGTTGTTTAT
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