FC932146

Overview
NameFC932146
Unique NameFC932146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: BRAF1_COTJA (B-Raf proto-oncogene serine/threonine-protein kinase OS=Coturnix coturnix japonica GN=BRAF PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.042e-34
Identity = 75/216 (34.72%), Postives = 131/216 (60.65%), Query Frame = 1
Query:   46 EEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIIT--DSPMRDSSSAGTPEWMAPELIR---NEPFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            ++W I   ++TVG R+G G FG V++G W+G DVA+K+      T + ++ F NE+ +L + RH N++LF+G  TKP +L+++T++ E  SLYH +H+   + K    +   + R   +G+  +H   I+HRDLKS N  +++  TVKI DFGL+ + +      +    +G+  WMAPE+IR     P++ + D+++ G++++EL T   P+  +
Sbjct:  488 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 699          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: BRAF1_CHICK (B-Raf proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=BRAF PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.042e-34
Identity = 75/216 (34.72%), Postives = 131/216 (60.65%), Query Frame = 1
Query:   46 EEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIIT--DSPMRDSSSAGTPEWMAPELIR---NEPFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            ++W I   ++TVG R+G G FG V++G W+G DVA+K+      T + ++ F NE+ +L + RH N++LF+G  TKP +L+++T++ E  SLYH +H+   + K    +   + R   +G+  +H   I+HRDLKS N  +++  TVKI DFGL+ + +      +    +G+  WMAPE+IR     P++ + D+++ G++++EL T   P+  +
Sbjct:  488 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 699          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: RAF1_CHICK (RAF proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=RAF1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.197e-34
Identity = 77/214 (35.98%), Postives = 129/214 (60.28%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIIT--DSPMRDSSSAGTPEWMAPELIR---NEPFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            W I+ SE+ + TR+G G FG V++G W+G DVA+K+    D T E  + F NE+++L + RH N++LF+G  TK   L+++T++ E  SLY  +H+  Q+ K    +   + R   +G+  +H   I+HRD+KS N  +++  TVKI DFGL+ + +      +     G+  WMAPE+IR   + PF+ + D++S G++++EL T   P+  +
Sbjct:  342 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHV--QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHI 551          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: Y1199_DICDI (Probable serine/threonine-protein kinase DDB_G0282895 OS=Dictyostelium discoideum GN=DDB_G0282895 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.201e-33
Identity = 78/214 (36.45%), Postives = 125/214 (58.41%), Query Frame = 1
Query:   40 AYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKP----PRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPW 669
            A+    I+ SEL +   +G G   EV +GIW G +VA+K+F E   +   +EDF  E++IL  + HPN++   GAC  P        ++TE M  G+L  +I+   + K LS     K    + +GL  +H +  +HRD+K+AN LV+K+   K+ DFGLSR+I D+    ++ AGTP+W +PE +  E +T   D++S G++++EL T + P+
Sbjct: 1366 AFAHTQIEESELQILQFLGEGALAEVHKGIWKGKEVAVKIFNEGSFSFR-LEDFLKEVAILGLISHPNLLKLKGACIAPRSHKSTFMIVTELMHKGTLLEVIN---KNKPLSLEDIIKYALSVAQGLAYLHSVDFIHRDIKAANILVDKNNNAKVGDFGLSRVI-DNNFNMTAVAGTPKWESPECLMGEAYTSASDVYSYGMMLFELATGDEPF 1574          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: M3K13_PONAB (Mitogen-activated protein kinase kinase kinase 13 OS=Pongo abelii GN=MAP3K13 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.201e-33
Identity = 84/211 (39.81%), Postives = 118/211 (55.92%), Query Frame = 1
Query:   46 EEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            + W + F E++    +G G  G VF G +   +VAIK   EQ+ T         +I  L +L+HPN+I F G CT+ P   +I EY   G LY ++      +K++ R        I  G+  +H  KI+HRDLKS N LV     VKI DFG S+ ++D   +  S AGT  W+APE+IRNEP +EK DI+S GV++WEL T   P++ V
Sbjct:  159 DTWEVPFEEISELQWLGSGAQGAVFLGKFRAEEVAIKKVREQNET---------DIKHLRKLKHPNIIAFKGVCTQAPCYCIIMEYCAHGQLYEVLRAG---RKITPRLLVDWSTGIASGMNYLHLHKIIHRDLKSPNVLVTHTDAVKISDFGTSKELSDKSTK-MSFAGTVAWLAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDV 356          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: KINX_DICDI (Probable serine/threonine-protein kinase kinX OS=Dictyostelium discoideum GN=kinX PE=3 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.201e-33
Identity = 76/208 (36.54%), Postives = 117/208 (56.25%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVF--LEQDLTAENMEDFCN-EISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRP 666
            W+I + +L   + +G G FG+VF+G + G  VAIK    L  D    ++E F N EI  +    HPNVI F+G       L ++TE +E G L +  +L  Q   L W  +  +  D+   +  +H   IVHRDLKS N LV+K+W +K+CDFG +RI+ +   +  +  GT  WM+PE+I    + E+ DIFS G+++ E+ +  +P
Sbjct:   15 WSIKYEDLDFISEIGSGGFGKVFKGEYLGAPVAIKKIHILPDDPNRVDLEKFLNREIETIKLFTHPNVIQFVGISENNGILFIVTELIEGGDLQY--YLKNQSIDLPWFLRANIALDVSLAMSYLHSKSIVHRDLKSTNLLVDKNWKIKVCDFGFARIVEEDNNKSMTICGTDNWMSPEMITGLDYDERSDIFSFGIVLLEIISRVKP 220          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: SHKA_DICDI (Dual specificity protein kinase shkA OS=Dictyostelium discoideum GN=shkA PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.569e-33
Identity = 79/204 (38.73%), Postives = 125/204 (61.27%), Query Frame = 1
Query:   58 IDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMK--IVHRDLKSANCLVNKHWTVKICDFGLSRI-ITDSPMRD--SSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCT 654
            I  +E+T  + +G G FG V++G     DVA+KV L+Q +  + + DF  E++I+S++ HPN++LFLGACT  P   MI   +  G+L  L  L     KL    + +M +D   G++ +H      +HRDLK++N LV+ + TVK+CDFGLS+I      ++D    + GTP WMAPE+++   F EK D++S G+++W++ T
Sbjct:   40 ISETEITTESILGDGSFGTVYKGRCRLKDVAVKVMLKQ-VDQKTLTDFRKEVAIMSKIFHPNIVLFLGACTSTPGKLMICTELMKGNLESL--LLDPMVKLPLITRMRMAKDAALGVLWLHSSNPVFIHRDLKTSNLLVDANLTVKVCDFGLSQIKQRGENLKDGQDGAKGTPLWMAPEVLQGRLFNEKADVYSFGLVLWQIFT 240          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: RAF1_XENLA (RAF proto-oncogene serine/threonine-protein kinase OS=Xenopus laevis GN=raf1 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.569e-33
Identity = 77/214 (35.98%), Postives = 130/214 (60.75%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIIT--DSPMRDSSSAGTPEWMAPELIR---NEPFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            W I  SE+ + +R+G G FG V++G W+G DVA+K+    D T E ++ F NE+++L + RH N++LF+G  TK   L+++T++ E  SLY+ +H+   K ++   +   + R   +G+  +H   I+HRD+KS N  +++  TVKI DFGL+ + T      +     G+  WMAPE+IR   N PF+ + D++S G++++EL T   P+  +
Sbjct:  333 WEIIASEVMLSSRIGSGSFGTVYKGKWHG-DVAVKILKVTDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYYHLHVLDTKFQMF--QLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKTRWSGSQQVEQLTGSILWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 542          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: RAF1_MOUSE (RAF proto-oncogene serine/threonine-protein kinase OS=Mus musculus GN=Raf1 PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33
Identity = 76/211 (36.02%), Postives = 128/211 (60.66%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIIT--DSPMRDSSSAGTPEWMAPELIR---NEPFTEKCDIFSLGVIMWELCTLNRPW 669
            W I+ SE+ + TR+G G FG V++G W+G DVA+K+    D T E ++ F NE+++L + RH N++LF+G  TK   L+++T++ E  SLY  +H+  Q+ K    +   + R   +G+  +H   I+HRD+KS N  +++  TVKI DFGL+ + +      +     G+  WMAPE+IR   + PF+ + D++S G++++EL     P+
Sbjct:  342 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHV--QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDDNPFSFQSDVYSYGIVLYELMAGELPY 548          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: MIL_AVIMH (Serine/threonine-protein kinase-transforming protein mil OS=Avian retrovirus MH2 GN=V-MIL PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33
Identity = 77/214 (35.98%), Postives = 128/214 (59.81%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIIT--DSPMRDSSSAGTPEWMAPELIR---NEPFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            W I+ SE+ + TR+G G FG V++G W+G DVA+K+    D T E  + F NE+++L + RH N++LF+G  TK   L+++T++ E  SLY  +H+  Q+ K    +   + R   +G+  +H   I+HRD+KS N  ++   TVKI DFGL+ + +      +     G+  WMAPE+IR   + PF+ + D++S G++++EL T   P+  +
Sbjct:   75 WEIEASEVLLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHV--QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHGGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHI 284          
The following BLAST results are available for this feature:
BLAST of FC932146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BRAF1_COTJA7.042e-3434.72B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_CHICK7.042e-3434.72B-Raf proto-oncogene serine/threonine-protein kina... [more]
RAF1_CHICK9.197e-3435.98RAF proto-oncogene serine/threonine-protein kinase... [more]
Y1199_DICDI1.201e-3336.45Probable serine/threonine-protein kinase DDB_G0282... [more]
M3K13_PONAB1.201e-3339.81Mitogen-activated protein kinase kinase kinase 13 ... [more]
KINX_DICDI1.201e-3336.54Probable serine/threonine-protein kinase kinX OS=D... [more]
SHKA_DICDI1.569e-3338.73Dual specificity protein kinase shkA OS=Dictyostel... [more]
RAF1_XENLA1.569e-3335.98RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_MOUSE2.049e-3336.02RAF proto-oncogene serine/threonine-protein kinase... [more]
MIL_AVIMH2.049e-3335.98Serine/threonine-protein kinase-transforming prote... [more]

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Properties
Property NameValue
Genbank descriptionC34205B05EF PostHarveN Citrus clementina cDNA clone C34205B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932146 ID=FC932146; Name=FC932146; organism=Citrus clementina; type=EST; length=698bp
GTTTTGGAATCTCCCATGTTCCAGAATAAACCTTTATTAGCTTATGAGGA
ATGGAACATTGACTTCTCTGAATTAACTGTGGGAACTCGTGTTGGAATTG
GTTTTTTCGGAGAAGTTTTTCGTGGCATATGGAATGGTACAGATGTTGCA
ATCAAGGTTTTCTTGGAGCAAGATCTAACAGCAGAAAACATGGAAGACTT
TTGCAATGAGATATCTATTCTAAGTCGTCTTCGGCATCCTAATGTTATCT
TATTTTTGGGTGCTTGCACAAAGCCTCCACGATTGTCAATGATTACTGAA
TACATGGAGCTGGGGTCCTTGTACCATTTGATTCATTTGAGTGGTCAAAA
AAAGAAGCTTAGCTGGAGGAGAAAATTTAAAATGCTACGTGATATATGCA
GGGGTTTGATGTGCATACACCGAATGAAGATAGTCCATCGTGACTTAAAA
AGTGCAAACTGTCTTGTGAATAAACACTGGACTGTCAAGATATGTGATTT
TGGGCTATCGAGAATAATAACGGACTCACCCATGAGAGACTCCTCATCTG
CTGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGCAATGAACCCTTC
ACAGAAAAATGTGATATTTTTAGCCTTGGGGTCATAATGTGGGAGCTCTG
CACTCTAAATAGACCATGGGAAGGTGTACTACCAGAAGGGTTGTTTAT
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