FC932146

Overview
NameFC932146
Unique NameFC932146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: YTYK2_DICDI (Probable tyrosine-protein kinase DDB_G0283397 OS=Dictyostelium discoideum GN=DDB_G0283397 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.676e-33
Identity = 86/216 (39.81%), Postives = 124/216 (57.41%), Query Frame = 1
Query:   70 ELTVGTRVGIGFFGEVFRGIWNGTDVAIK---VFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACT---KPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRM----KIVHRDLKSANCLVNKHWTV-KICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVLP 684
            ELTV   +G GFFG+V++  W G  VA+K   +   +DLT    E F  E+SI+S+L HP  ++F+GAC+        S+I EYME GSL  L+        L    +  + RDI  G+  +H       IVHRDL S+N L+N  +TV KI DFGLS+ +   P   +++ G+  WMAPE  + E +TEK D++S  +I+WE+ T   P+ G+ P
Sbjct:  176 ELTVEKEIGQGFFGKVYKARWRGKSVALKKITLIKFRDLT--ETEIFDKEVSIMSKLCHPTCVMFIGACSLDGPSNDRSIIMEYMEGGSLRRLLD-EKSSYHLPPSLQLSIARDIAEGMNYLHTNFKEGPIVHRDLTSSNILLNSSYTVAKINDFGLSKEMKPGPTEMTAAMGSLAWMAPECFKAENYTEKVDVYSFAIILWEIVTCRDPYNGMEP 388          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: PYK1_DICDI (Dual specificity protein kinase pyk1 OS=Dictyostelium discoideum GN=splA PE=1 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 2.676e-33
Identity = 86/230 (37.39%), Postives = 130/230 (56.52%), Query Frame = 1
Query:   49 EWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKV-FLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTK--PPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMK--IVHRDLKSANCLVNKHWT-------------VKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVLP 684
            E+ IDF+EL  G  +G GFFGEV RG W  TDVAIK+ + +Q  T  ++  F NE+ ILS+LRHPNV+ FLGACT        ++TE+M  GSL   +       + +   + K+  DI +G+  +H     I+HRDL S N L++ +                KI DFGLSR+  +   + + S G   +MAPE+ + +  +EK D++S G++++EL T + P + + P
Sbjct: 2107 EYEIDFNELEFGQTIGKGFFGEVKRGYWRETDVAIKIIYRDQFKTKSSLVMFQNEVGILSKLRHPNVVQFLGACTAGGEDHHCIVTEWMGGGSLRQFLTDHFNLLEQNPHIRLKLALDIAKGMNYLHGWTPPILHRDLSSRNILLDHNIDPKNPVVSSRQDIKCKISDFGLSRLKMEQASQMTQSVGCIPYMAPEVFKGDSNSEKSDVYSYGMVLFELLTSDEPQQDMKP 2336          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: RAF_MSV36 (Serine/threonine-protein kinase-transforming protein raf OS=Murine sarcoma virus 3611 GN=V-RAF PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.564e-33
Identity = 75/211 (35.55%), Postives = 128/211 (60.66%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIIT--DSPMRDSSSAGTPEWMAPELIR---NEPFTEKCDIFSLGVIMWELCTLNRPW 669
            W ++ SE+ + TR+G G FG V++G W+G DVA+K+    D T E ++ F NE+++L + RH N++LF+G  TK   L+++T++ E  SLY  +H+  Q+ K    +   + R   +G+  +H   I+HRD+KS N  +++  TVKI DFGL+ + +      +     G+  WMAPE+IR   + PF+ + D++S G++++EL     P+
Sbjct:   17 WKMEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHV--QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDDNPFSFQSDVYSYGIVLYELMAGELPY 223          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: Y9963_DICDI (Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum GN=DDB_G0272254 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.961e-33
Identity = 71/215 (33.02%), Postives = 128/215 (59.53%), Query Frame = 1
Query:   58 IDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVF-LEQDLTAENM-EDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLR----DICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVLP 684
            I++S++ +   +G G F +V +G W G DVA+K     +D   E M ++F  E+ +L  L+HPN++   G    P  + ++ E++  G+L+ LIH    +++ S +    ++     DI RG+  +H   I+HRDLKS+N L++KH+ +KI D G++R    S  +  ++ GT  W APE++R+E + +K D++S  ++++EL T   P++G+ P
Sbjct: 1068 INYSDIKIDKEIGKGHFSKVLKGNWKGKDVAVKKLNSNKDKAREEMIQEFKAEVELLGSLQHPNLVTCYGYSLNP--MCIVMEFLPSGNLFELIHSKPSEQQQSIKLDSTLILAIAFDIARGMQHLHTRNIIHRDLKSSNLLMDKHFNIKIADLGIAR--ETSFTQTMTTIGTVAWTAPEILRHESYNQKADVYSYAIVLYELLTGEEPYQGIPP 1278          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: Y9849_DICDI (Probable serine/threonine-protein kinase DDB_G0278535 OS=Dictyostelium discoideum GN=DDB_G0278535 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.961e-33
Identity = 80/208 (38.46%), Postives = 120/208 (57.69%), Query Frame = 1
Query:   46 EEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRM--KIVHRDLKSANCLVNKHWTVKICDFGLSRIIT-DSPMRDSSSAGTPEWMAPELI--RNEPFTEKCDIFSLGVIMWELCT 654
            E W ID SEL    ++G G  G+V++G++ G +VA+KV L+   T   +E+F  E  I+  +R   ++ F GAC +P +L M+ EY    SLYH+++   +K  + W R F+    +  G+ C+H    +IVHRD KS N LVN+ W  K+ DFGLSR  T D+    S   GT  + +PE+       +T K DI+S+G++ WEL T
Sbjct:  520 EHWVIDHSELEYTLKLGSGSSGKVYKGLYKGKEVAVKV-LKSITTQSQLEEFKKEFQIMGSIRSQFMVTFYGACIEP-KLCMVMEYCSRDSLYHVMNT--KKYDIGWDRFFQFTMQMTLGVQCLHNWTPQIVHRDFKSLNLLVNEDWECKVSDFGLSRFNTADNLETLSKIRGTFAYCSPEVAVGNGSLYTTKSDIYSIGIVFWELVT 723          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: Y9848_DICDI (Probable serine/threonine-protein kinase DDB_G0272092 OS=Dictyostelium discoideum GN=DDB_G0272092 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32
Identity = 79/204 (38.73%), Postives = 118/204 (57.84%), Query Frame = 1
Query:   46 EEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRM--KIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRD-SSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWEL 648
            + W ID   LT    +G G  G+V++G +NG +VAIKV L+     +++ +F  E  I+S LR P V+ F GA  K  +L ++ EY   GSLYH+  L     + +W   F +       L  +H    +++HRDLKS N LV ++WTVKICDFGLSR  T S +       GT  ++APE+   + +T K D++S+G+I+WE+
Sbjct:  592 DSWVIDEKTLTYNVLLGTGASGKVYKGTFNGQEVAIKV-LKSFTDKKDIAEFKKEFQIVSALRAPGVVYFHGAGIKD-KLCIVMEYCSRGSLYHI--LKDDTTQFTWDNFFNLGTQAINSLDSLHNWTPQVLHRDLKSLNLLVTENWTVKICDFGLSRFDTGSNLETLGKLRGTYAYVAPEVYFGKKYTTKSDVYSMGIILWEM 791          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: Y9844_DICDI (Probable serine/threonine-protein kinase DDB_G0282963 OS=Dictyostelium discoideum GN=DDB_G0282963 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32
Identity = 80/213 (37.56%), Postives = 126/213 (59.15%), Query Frame = 1
Query:   58 IDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMK--IVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCT------LNRPWE 672
            I  ++L +  ++G G F +V++  + G  VAIKV L+ + T+E +E F  E  ILS +   N+I F GAC K  +L M+TEY + GSLYH+  +S +K  +SW   FK +     G+  +H M+  +VHRD+KS N L+N  + +K+ DFGL++        +S+  GT  + APEL     ++EK D++SLG+++WE+ T        RP+E
Sbjct: 1471 ISSTDLFLIKKIGAGSFSKVYKAKYMGEIVAIKV-LKGEATSEQIELFKKEYDILSLVSSQNLIKFYGAC-KEKKLRMVTEYCQHGSLYHI--MSKRKMDISWPLVFKWMHQAVDGINSLHTMRPALVHRDIKSQNLLINSQFDLKVADFGLAKPTELQTGSNSTIKGTMAYCAPELYNGISYSEKADVYSLGIVLWEITTRVITGKYQRPYE 1679          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: TEC_MOUSE (Tyrosine-protein kinase Tec OS=Mus musculus GN=Tec PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32
Identity = 78/214 (36.45%), Postives = 116/214 (54.21%), Query Frame = 1
Query:   40 AYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGT-DVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTP-EWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNR-PWE 672
            +Y++W I+ SELT    +G G FG V  G W     VAIK   E  +  E   DF  E  ++ +L HP ++   G CT+   + ++TE+ME G L +   L  ++   S      M +D+C G+  + R   +HRDL + NCLVN+   VK+ DFG++R + D     SS A  P +W  PE+     F+ K D++S GV+MWE+ T  R P+E
Sbjct:  358 SYDKWEINPSELTFMRELGSGLFGVVRLGKWRAQYKVAIKAIREGAMCEE---DFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTEFMERGCLLNF--LRQRQGHFSRDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVNEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVFNYSRFSSKSDVWSFGVLMWEIFTEGRMPFE 566          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: SRK1_SPOLA (Tyrosine-protein kinase isoform SRK1 OS=Spongilla lacustris GN=SRK1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32
Identity = 78/216 (36.11%), Postives = 122/216 (56.48%), Query Frame = 1
Query:   40 AYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGT-DVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTP-EWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNR-PWEGV 678
            A EEW I+ +++ +  R+G G FGEV+ G+WNGT  VA+K      ++   +E+F  E SI+ RLRHP +I     CTK   + ++TE M+ GSL  L +L G+   L   +   +   +  G+  + +   +HRDL + N LV +H   K+ DFGL+R+I +      + A  P +W APE      FT K D++S GV+++E+ T  R P+ G+
Sbjct:  229 ANEEWEIEKTQIKLLRRLGAGQFGEVWEGLWNGTTSVAVKTLKPGTMS---VEEFLQEASIMKRLRHPKLIQLYAVCTKEEPIYIVTELMKYGSL--LEYLRGEDGVLKIEQLVDVAAQVASGMSYLEQQNYIHRDLAARNILVGEHGICKVADFGLARVIDEEIYEAHTGAKFPIKWTAPEAAMYNRFTIKSDVWSFGVVLYEIITYGRFPYPGM 439          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: GEFX_DICDI (RasGEF domain-containing serine/threonine-protein kinase X OS=Dictyostelium discoideum GN=gefX PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32
Identity = 70/206 (33.98%), Postives = 116/206 (56.31%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDS-PMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRP 666
            W+I F  L    ++G G FG VFRG + G DVAIK   + D   E ++    E+S+L  LRHP ++ F G C     L ++TE++  G +  L+    +   + W ++  +  D+ + ++ +H  KI+HRDLKS N L+++   +++CDFG +R+   +   R  +  GT  W+APE++    +   CD+FS GV++ EL T  +P
Sbjct:   14 WDIPFESLEFNEKIGKGSFGSVFRGCYLGLDVAIKKIEKAD-DPEYLKYIDREVSMLQSLRHPFIVNFSGICVHSSGLYIVTEFVSGGDVRQLLK---KTPPIGWDKRVSIAVDLAKAMVFLHAKKIIHRDLKSKNILLDEFQRIRLCDFGFARMSEQTKKSRHMTMCGTEGWVAPEILLGMSYDTSCDVFSYGVVLAELITGRKP 215          
The following BLAST results are available for this feature:
BLAST of FC932146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
YTYK2_DICDI2.676e-3339.81Probable tyrosine-protein kinase DDB_G0283397 OS=D... [more]
PYK1_DICDI2.676e-3337.39Dual specificity protein kinase pyk1 OS=Dictyostel... [more]
RAF_MSV364.564e-3335.55Serine/threonine-protein kinase-transforming prote... [more]
Y9963_DICDI5.961e-3333.02Probable serine/threonine-protein kinase DDB_G0272... [more]
Y9849_DICDI5.961e-3338.46Probable serine/threonine-protein kinase DDB_G0278... [more]
Y9848_DICDI2.265e-3238.73Probable serine/threonine-protein kinase DDB_G0272... [more]
Y9844_DICDI2.265e-3237.56Probable serine/threonine-protein kinase DDB_G0282... [more]
TEC_MOUSE2.265e-3236.45Tyrosine-protein kinase Tec OS=Mus musculus GN=Tec... [more]
SRK1_SPOLA2.265e-3236.11Tyrosine-protein kinase isoform SRK1 OS=Spongilla ... [more]
GEFX_DICDI6.591e-3233.98RasGEF domain-containing serine/threonine-protein ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34205B05EF PostHarveN Citrus clementina cDNA clone C34205B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932146 ID=FC932146; Name=FC932146; organism=Citrus clementina; type=EST; length=698bp
GTTTTGGAATCTCCCATGTTCCAGAATAAACCTTTATTAGCTTATGAGGA
ATGGAACATTGACTTCTCTGAATTAACTGTGGGAACTCGTGTTGGAATTG
GTTTTTTCGGAGAAGTTTTTCGTGGCATATGGAATGGTACAGATGTTGCA
ATCAAGGTTTTCTTGGAGCAAGATCTAACAGCAGAAAACATGGAAGACTT
TTGCAATGAGATATCTATTCTAAGTCGTCTTCGGCATCCTAATGTTATCT
TATTTTTGGGTGCTTGCACAAAGCCTCCACGATTGTCAATGATTACTGAA
TACATGGAGCTGGGGTCCTTGTACCATTTGATTCATTTGAGTGGTCAAAA
AAAGAAGCTTAGCTGGAGGAGAAAATTTAAAATGCTACGTGATATATGCA
GGGGTTTGATGTGCATACACCGAATGAAGATAGTCCATCGTGACTTAAAA
AGTGCAAACTGTCTTGTGAATAAACACTGGACTGTCAAGATATGTGATTT
TGGGCTATCGAGAATAATAACGGACTCACCCATGAGAGACTCCTCATCTG
CTGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGCAATGAACCCTTC
ACAGAAAAATGTGATATTTTTAGCCTTGGGGTCATAATGTGGGAGCTCTG
CACTCTAAATAGACCATGGGAAGGTGTACTACCAGAAGGGTTGTTTAT
back to top