FC932146

Overview
NameFC932146
Unique NameFC932146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: FES_FSVST (Tyrosine-protein kinase transforming protein Fes OS=Feline sarcoma virus (strain Snyder-Theilen) GN=V-FES PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21
Identity = 56/207 (27.05%), Postives = 103/207 (49.76%), Query Frame = 1
Query:   46 EEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKV-FLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAG--TPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTL 657
            ++W ++  +L +G ++G G FGEVF G     +  + V    + L  +    F  E  IL +  HPN++  +G CT+   + ++ E ++ G     +   G + ++  +   +M+ D   G+  +     +HRDL + NCLV +   +KI DFG+SR   D     S        +W APE +    ++ + D++S G+++WE  +L
Sbjct:  207 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDIKAKFLQEAKILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRM--KTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRLVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSL 411          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: DDR2_HUMAN (Discoidin domain-containing receptor 2 OS=Homo sapiens GN=DDR2 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21
Identity = 75/221 (33.94%), Postives = 102/221 (46.15%), Query Frame = 1
Query:   73 LTVGTRVGIGFFGEVFRGIWNGTD------------------VAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHL-------SGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSR-IITDSPMRDSSSAGTP-EWMAPELIRNEPFTEKCDIFSLGVIMWELCT 654
            LT   ++G G FGEV      G +                  VA+K+ L  D       DF  EI I+SRL+ PN+I  L  C     L MITEYME G L   +         S   + +S+     M   I  G+  +  +  VHRDL + NCLV K++T+KI DFG+SR + +    R    A  P  WM+ E I    FT   D+++ GV +WE  T
Sbjct:  563 LTFKEKLGEGQFGEVHLCEVEGMEKFKDKDFALDVSANQPVLVAVKM-LRADANKNARNDFLKEIKIMSRLKDPNIIHLLAVCITDDPLCMITEYMENGDLNQFLSRHEPPNSSSSDVRTVSYTNLKFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWETFT 782          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 70/215 (32.56%), Postives = 113/215 (52.56%), Query Frame = 1
Query:   31 PLLAYEEWNIDFSELTVGTRVGIGFFGEVFRGIW-NGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLY-HLIHLSGQKKKLSWRRKFKMLRDICRGLMCIH---RMKIVHRDLKSANCLVNKHWTVKICDFGLSRI--ITDSPMRDSSSA--GTPEWMAPELIRNEPFTEKCDIFSLGVIMWEL 648
            P   Y+E        +    +G G +G V+ G + N + VAIK    +D T+  ++   NEI +LS + HPN++  LG C       ++ E+M  G+LY HL H  GQ   LSW+ +  +       +  +H      I HRD+KS+N L++  +  KI DFGLSR+   TD      S+A  GTP ++ P+  ++   ++K D++S GV++ E+
Sbjct:  298 PFYTYKEIEKATDSFSDKNMLGTGAYGTVYAGEFPNSSCVAIKRLKHKDTTS--IDQVVNEIKLLSSVSHPNLVRLLGCCFADGEPFLVYEFMPNGTLYQHLQHERGQ-PPLSWQLRLAIACQTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEI 509          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: STK4_PAPAN (Serine/threonine-protein kinase 4 OS=Papio anubis GN=STK4 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 66/202 (32.67%), Postives = 111/202 (54.95%), Query Frame = 1
Query:   88 RVGIGFFGEVFRGIWNGTD--VAIK-VFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVLP 684
            ++G G +G V++ I   T   VAIK V +E DL     ++   EISI+ +   P+V+ + G+  K   L ++ EY   GS+  +I L  + K L+      +L+   +GL  +H M+ +HRD+K+ N L+N     K+ DFG++  +TD+  + ++  GTP WMAPE+I+   +    DI+SLG+   E+     P+  + P
Sbjct:   35 KLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL-----QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGQAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP 229          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 67/214 (31.31%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   91 VGIGFFGEVFRG-IWNGTDVAIKVFLE------QDLTAENMED-FCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHR---MKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSS--AGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVLPEGL 693
            +G G  G V+R  + NG  +A+K           D   +N+ D F  E+  L  +RH N++ FLG C       ++ +YM  GSL  L+H   +   L W  ++++L    +GL  +H      IVHRD+K+ N L+   +   I DFGL++++ +  +   S+  AG+  ++APE   +   TEK D++S GV++ E+ T  +P +  +PEG+
Sbjct:  792 IGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLH-ERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGI 1004          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: PAKA_DICDI (Serine/threonine-protein kinase pakA OS=Dictyostelium discoideum GN=pakA PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 59/194 (30.41%), Postives = 104/194 (53.61%), Query Frame = 1
Query:   88 RVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPW 669
            ++G G  GEVF  I + T+  I +  +  L A+N++   NEI ++    H N++ ++ +      L +  E+M  G L  ++    +  +L+  +   + +++ RGL  IH+   +HRD+KS N L+  +  +K+ DFG +  +T      +S  GTP WMAPELIR   +  K D++SLG++  E+     P+
Sbjct:  916 KIGEGGAGEVFEAINSRTNQTIAI-KKMKLKAQNLKTVINEIGMMKNSNHENIVQYIDSYIVADELWVAMEFMSGGCLTEVLD-QYRDIQLNESQIAFVCQEVLRGLEYIHKFNRIHRDIKSDNILIGANGEIKLADFGYAAQLTQIRQERNSVVGTPYWMAPELIRGNNYDFKVDVWSLGIMTREMAEGEPPY 1107          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: NRKA_TRYBB (Putative serine/threonine-protein kinase A OS=Trypanosoma brucei brucei GN=NRKA PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 64/207 (30.92%), Postives = 109/207 (52.66%), Query Frame = 1
Query:   91 VGIGFFGEVF--RGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHL--SGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITD--SPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVLPEGL 693
            VG+G +GE +    + +G+    KV     ++  +     +EI  L+   HPN+I ++    +  RL ++ E+ + G+L   I L  SG  +         +   +C  L  IH  K++HRD+KSAN L+     VK+ DFG S    D  S +  S+  GTP ++APEL  N+ + +K D++SLGV+++E+  + +P+     +GL
Sbjct:   26 VGLGSYGEAYVAESVEDGSLCVAKVMDLSKMSQRDKRYAQSEIKCLANCNHPNIIRYIEDHEENDRLLIVMEFADSGNLDEQIKLRGSGDARYFQEHEALFLFLQLCLALDYIHSHKMLHRDIKSANVLLTSTGLVKLGDFGFSHQYEDTVSGVVASTFCGTPYYLAPELWNNKRYNKKADVWSLGVLLYEIMGMKKPFSASNLKGL 232          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: MUSK_HUMAN (Muscle, skeletal receptor tyrosine protein kinase OS=Homo sapiens GN=MUSK PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 76/265 (28.68%), Postives = 122/265 (46.04%), Query Frame = 1
Query:   10 SPMFQNKPLLA--------YEEWNIDFSELTVGTRVGIGFFGEVFRGIWNG-------TDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHL---------------------SGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRII--TDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLN-RPWEGVLPE 687
            +PM+Q  PLL         Y   NI++        +G G FG VF+    G       T VA+K+ L+++ +A+   DF  E ++++   +PN++  LG C     + ++ EYM  G L   +                       S     LS   +  + R +  G+  +   K VHRDL + NCLV ++  VKI DFGLSR I   D    + + A    WM PE I    +T + D+++ GV++WE+ +   +P+ G+  E
Sbjct:  551 NPMYQRMPLLLNPKLLSLEYPRNNIEYVR-----DIGEGAFGRVFQARAPGLLPYEPFTMVAVKM-LKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSMRAQVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKANENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE 809          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: MERTK_MOUSE (Proto-oncogene tyrosine-protein kinase Mer OS=Mus musculus GN=Mertk PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 73/239 (30.54%), Postives = 116/239 (48.54%), Query Frame = 1
Query:   10 SPMFQNKPLLAYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTD-----VAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKP-----PRLSMITEYMELGSLYHLI---HLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLS-RIITDSPMRDSSSAGTP-EWMAPELIRNEPFTEKCDIFSLGVIMWELCTLN-RPWEGV 678
            S   QNK     E+  ID + L +G  +G G FG V  G     D     VA+K     + +   +E+F +E + +    HPNVI  LG C +      P+  +I  +M+ G L+  +    L+   K +  +   K + DI +G+  +     +HRDL + NC++    TV + DFGLS +I +    R    A  P +W+A E + +  +T K D+++ GV MWE+ T    P+ GV
Sbjct:  565 SEELQNK----LEDVVIDRNLLVLGKVLGEGEFGSVMEGNLKQEDGTSQKVAVKTMKLDNFSQREIEEFLSEAACMKDFNHPNVIRLLGVCIELSSQGIPKPMVILPFMKYGDLHTFLLYSRLNTGPKYIHLQTLLKFMMDIAQGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEITTRGMTPYPGV 799          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: M3KSL_DROME (Mitogen-activated protein kinase kinase kinase OS=Drosophila melanogaster GN=slpr PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 72/225 (32.00%), Postives = 121/225 (53.78%), Query Frame = 1
Query:   58 IDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLE--QDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKK---LSWRRKFKMLRDICRGLMCIHR---MKIVHRDLKSANCLVNK--------HWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVLP 684
            I+++EL +   +G G F +V RG ++G +VAIK+  +  +D      ++   E  +   L+H N+    G C    +L ++ EY   GSL  +  L+G+      ++W  +      I RG+  +H    M I+HRDLKS+N L+ +          T+KI DFGL+R + ++  +  S+AGT  WM PE+I    +++  D++S GV++WEL T   P++G  P
Sbjct:  137 IEYNELDIKEVIGSGGFCKVHRGYYDGEEVAIKIAHQTGEDDMQRMRDNVLQEAKLFWALKHENIAALRGVCLNT-KLCLVMEYARGGSLNRI--LAGKIPPDVLVNWAIQ------IARGMNYLHNEAPMSIIHRDLKSSNVLIYEAIEGNHLQQKTLKITDFGLAREMYNT--QRMSAAGTYAWMPPEVISVSTYSKFSDVWSYGVLLWELITGETPYKGFDP 350          
The following BLAST results are available for this feature:
BLAST of FC932146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FES_FSVST1.055e-2127.05Tyrosine-protein kinase transforming protein Fes O... [more]
DDR2_HUMAN1.055e-2133.94Discoidin domain-containing receptor 2 OS=Homo sap... [more]
WAKLR_ARATH1.377e-2132.56Wall-associated receptor kinase-like 21 OS=Arabido... [more]
STK4_PAPAN1.377e-2132.67Serine/threonine-protein kinase 4 OS=Papio anubis ... [more]
RCH2_ARATH1.377e-2131.31Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
PAKA_DICDI1.377e-2130.41Serine/threonine-protein kinase pakA OS=Dictyostel... [more]
NRKA_TRYBB1.377e-2130.92Putative serine/threonine-protein kinase A OS=Tryp... [more]
MUSK_HUMAN1.377e-2128.68Muscle, skeletal receptor tyrosine protein kinase ... [more]
MERTK_MOUSE1.377e-2130.54Proto-oncogene tyrosine-protein kinase Mer OS=Mus ... [more]
M3KSL_DROME1.377e-2132.00Mitogen-activated protein kinase kinase kinase OS=... [more]

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Properties
Property NameValue
Genbank descriptionC34205B05EF PostHarveN Citrus clementina cDNA clone C34205B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932146 ID=FC932146; Name=FC932146; organism=Citrus clementina; type=EST; length=698bp
GTTTTGGAATCTCCCATGTTCCAGAATAAACCTTTATTAGCTTATGAGGA
ATGGAACATTGACTTCTCTGAATTAACTGTGGGAACTCGTGTTGGAATTG
GTTTTTTCGGAGAAGTTTTTCGTGGCATATGGAATGGTACAGATGTTGCA
ATCAAGGTTTTCTTGGAGCAAGATCTAACAGCAGAAAACATGGAAGACTT
TTGCAATGAGATATCTATTCTAAGTCGTCTTCGGCATCCTAATGTTATCT
TATTTTTGGGTGCTTGCACAAAGCCTCCACGATTGTCAATGATTACTGAA
TACATGGAGCTGGGGTCCTTGTACCATTTGATTCATTTGAGTGGTCAAAA
AAAGAAGCTTAGCTGGAGGAGAAAATTTAAAATGCTACGTGATATATGCA
GGGGTTTGATGTGCATACACCGAATGAAGATAGTCCATCGTGACTTAAAA
AGTGCAAACTGTCTTGTGAATAAACACTGGACTGTCAAGATATGTGATTT
TGGGCTATCGAGAATAATAACGGACTCACCCATGAGAGACTCCTCATCTG
CTGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGCAATGAACCCTTC
ACAGAAAAATGTGATATTTTTAGCCTTGGGGTCATAATGTGGGAGCTCTG
CACTCTAAATAGACCATGGGAAGGTGTACTACCAGAAGGGTTGTTTAT
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