FC932146

Overview
NameFC932146
Unique NameFC932146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: Y9851_DICDI (Probable serine/threonine-protein kinase DDB_G0275165 OS=Dictyostelium discoideum GN=DDB_G0275165 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32
Identity = 74/210 (35.24%), Postives = 119/210 (56.67%), Query Frame = 1
Query:   34 LLAYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIK--VFLEQDLTAENMEDFCN-EISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCT 654
            ++ Y+E  I F  L++   +G G FG+V++G+ NG ++ IK     + D   + +  F   EI  L  L HPNVI F G   K   L ++TE +  G L+   ++  +   ++W+ K K+ RDI   +  +H   ++HRDLKS N LV ++W +K+CD GL+R +  S     +  GT +WMAPE++  E +   CD+FS G+++ EL T
Sbjct:   15 IVDYDE--IKFDPLSI---IGSGGFGKVYQGVLNGKEIGIKKITISDNDPNRDILLKFLEREIYTLKMLSHPNVIKFYGIAEKERSLFLLTELVSGGDLHW--YIKNKSIDITWKLKVKIARDIAASMAYLHENGVIHRDLKSTNLLVAENWVIKVCDMGLARKMDKSEKSKMTICGTDDWMAPEVLIGEEYDASCDVFSFGMVLIELIT 217          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: TEC_HUMAN (Tyrosine-protein kinase Tec OS=Homo sapiens GN=TEC PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32
Identity = 78/214 (36.45%), Postives = 116/214 (54.21%), Query Frame = 1
Query:   40 AYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGT-DVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTP-EWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNR-PWE 672
            +YE+W I+ SELT    +G G FG V  G W     VAIK   E  +  E   DF  E  ++ +L HP ++   G CT+   + ++TE+ME G L +   L  ++   S      M +D+C G+  + R   +HRDL + NCLV++   VK+ DFG++R + D     SS A  P +W  PE+     F+ K D++S GV+MWE+ T  R P+E
Sbjct:  359 SYEKWEINPSELTFMRELGSGLFGVVRLGKWRAQYKVAIKAIREGAMCEE---DFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTEFMERGCLLNF--LRQRQGHFSRDVLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVFNYSRFSSKSDVWSFGVLMWEVFTEGRMPFE 567          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: ARAF_HUMAN (A-Raf proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=ARAF PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31
Identity = 79/216 (36.57%), Postives = 128/216 (59.26%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIIT----DSPMRDSSSAGTPEWMAPELIRNE---PFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            W +  SE+ +  R+G G FG VFRG W+G DVA+KV      TAE  + F NE+ +L + RH N++LF+G  T+ P  ++IT++ E  SLYH +H++    +    +   + R   +G+  +H   I+HRDLKS N  +++  TVKI DFGL+ + T      P+   S  G+  WMA E+IR +   P++ + D+++ GV+++EL T + P+  +
Sbjct:  303 WEVPPSEVQLLKRIGTGSFGTVFRGRWHG-DVAVKVLKVSQPTAEQAQAFKNEMQVLRKTRHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVA--DTRFDMVQLIDVARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPS--GSVLWMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHI 512          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: ARAF_RAT (A-Raf proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus GN=Araf PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.468e-31
Identity = 79/216 (36.57%), Postives = 128/216 (59.26%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIIT----DSPMRDSSSAGTPEWMAPELIRNE---PFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            W +  SE+ +  R+G G FG VFRG W+G DVA+KV      TAE  + F NE+ +L + RH N++LF+G  T+ P  ++IT++ E  SLYH +H++    +    +   + R   +G+  +H   I+HRDLKS N  +++  TVKI DFGL+ + T      P+   S  G+  WMA E+IR +   P++ + D+++ GV+++EL T + P+  +
Sbjct:  301 WEVPPSEVQLLKRIGTGSFGTVFRGRWHG-DVAVKVLKVAQPTAEQAQAFKNEMQVLRKTRHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVA--DTRFDMVQLIDVARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPS--GSVLWMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHI 510          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: ARAF_PIG (A-Raf proto-oncogene serine/threonine-protein kinase OS=Sus scrofa GN=ARAF PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.468e-31
Identity = 79/216 (36.57%), Postives = 128/216 (59.26%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIIT----DSPMRDSSSAGTPEWMAPELIRNE---PFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            W +  SE+ +  R+G G FG VFRG W+G DVA+KV      TAE  + F NE+ +L + RH N++LF+G  T+ P  ++IT++ E  SLYH +H++    +    +   + R   +G+  +H   I+HRDLKS N  +++  TVKI DFGL+ + T      P+   S  G+  WMA E+IR +   P++ + D+++ GV+++EL T + P+  +
Sbjct:  303 WEVPPSEVQLLKRIGTGSFGTVFRGRWHG-DVAVKVLKVAQPTAEQAQAFKNEMQVLRKTRHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVA--DTRFDMVQLIDVARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPS--GSVLWMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHI 512          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: ARAF_MOUSE (A-Raf proto-oncogene serine/threonine-protein kinase OS=Mus musculus GN=Araf PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.468e-31
Identity = 79/216 (36.57%), Postives = 128/216 (59.26%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIIT----DSPMRDSSSAGTPEWMAPELIRNE---PFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            W +  SE+ +  R+G G FG VFRG W+G DVA+KV      TAE  + F NE+ +L + RH N++LF+G  T+ P  ++IT++ E  SLYH +H++    +    +   + R   +G+  +H   I+HRDLKS N  +++  TVKI DFGL+ + T      P+   S  G+  WMA E+IR +   P++ + D+++ GV+++EL T + P+  +
Sbjct:  301 WEVPPSEVQLLKRIGTGSFGTVFRGRWHG-DVAVKVLKVAQPTAEQAQAFKNEMQVLRKTRHVNILLFMGFMTR-PGFAIITQWCEGSSLYHHLHVA--DTRFDMVQLIDVARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPS--GSVLWMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHI 510          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: SRK4_SPOLA (Tyrosine-protein kinase isoform SRK4 OS=Spongilla lacustris GN=SRK1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.918e-31
Identity = 79/229 (34.50%), Postives = 122/229 (53.28%), Query Frame = 1
Query:    1 VLESPMFQNKPLLAYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGT-DVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTP-EWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNR-PWEGV 678
            V+E P        A EEW I+  ++ +   +G G FGEV+ G+WNGT  VA+K      ++   +E+F  E SI+ +LRHP +I     CTK   + ++TE M+ GSL  L +L G  + L       M   +  G+  + +   +HRDL + N LV +H   K+ DFGL+R+I +        A  P +W APE      FT K D++S G++++E+ T  R P+ G+
Sbjct:  216 VMEKPQTAGLSKQANEEWEIEKKQIKLLRGLGAGQFGEVWEGLWNGTTSVAVKTLKPGTMS---IEEFLEEASIMKQLRHPKLIQLYAVCTKEEPIYIVTELMKHGSL--LEYLRGDGRSLKLPDLVDMCSQVASGMSYLEQQNYIHRDLAARNILVGEHKICKVADFGLARVIDEEIYEAKLGAKFPIKWTAPEAAMYSRFTIKSDVWSFGIVLYEVITYGRFPYPGM 439          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: M3K12_RAT (Mitogen-activated protein kinase kinase kinase 12 OS=Rattus norvegicus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.918e-31
Identity = 82/209 (39.23%), Postives = 117/209 (55.98%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            W + F E+     VG G  G VF G ++G +VA+K   +   T         +I  L +L+HPN+I F G CT+ P   ++ E+   G LY ++  +G+    S    + M   I  G+  +H  KI+HRDLKS N L+     VKI DFG S+ ++D   +  S AGT  WMAPE+IRNEP +EK DI+S GV++WEL T   P++ V
Sbjct:  151 WEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKET---------DIKHLRKLKHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVLR-AGRPVTPSLLVDWSM--GIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTK-MSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDV 346          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: M3K12_MOUSE (Mitogen-activated protein kinase kinase kinase 12 OS=Mus musculus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.918e-31
Identity = 82/209 (39.23%), Postives = 117/209 (55.98%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            W + F E+     VG G  G VF G ++G +VA+K   +   T         +I  L +L+HPN+I F G CT+ P   ++ E+   G LY ++  +G+    S    + M   I  G+  +H  KI+HRDLKS N L+     VKI DFG S+ ++D   +  S AGT  WMAPE+IRNEP +EK DI+S GV++WEL T   P++ V
Sbjct:  151 WEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKET---------DIKHLRKLKHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVLR-AGRPVTPSLLVDWSM--GIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTK-MSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDV 346          
BLAST of FC932146 vs. ExPASy Swiss-Prot
Match: M3K12_HUMAN (Mitogen-activated protein kinase kinase kinase 12 OS=Homo sapiens GN=MAP3K12 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.918e-31
Identity = 82/209 (39.23%), Postives = 117/209 (55.98%), Query Frame = 1
Query:   52 WNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMELGSLYHLIHLSGQKKKLSWRRKFKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGV 678
            W + F E+     VG G  G VF G ++G +VA+K   +   T         +I  L +L+HPN+I F G CT+ P   ++ E+   G LY ++  +G+    S    + M   I  G+  +H  KI+HRDLKS N L+     VKI DFG S+ ++D   +  S AGT  WMAPE+IRNEP +EK DI+S GV++WEL T   P++ V
Sbjct:  118 WEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKET---------DIKHLRKLKHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVLR-AGRPVTPSLLVDWSM--GIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTK-MSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDV 313          
The following BLAST results are available for this feature:
BLAST of FC932146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y9851_DICDI8.608e-3235.24Probable serine/threonine-protein kinase DDB_G0275... [more]
TEC_HUMAN8.608e-3236.45Tyrosine-protein kinase Tec OS=Homo sapiens GN=TEC... [more]
ARAF_HUMAN1.124e-3136.57A-Raf proto-oncogene serine/threonine-protein kina... [more]
ARAF_RAT1.468e-3136.57A-Raf proto-oncogene serine/threonine-protein kina... [more]
ARAF_PIG1.468e-3136.57A-Raf proto-oncogene serine/threonine-protein kina... [more]
ARAF_MOUSE1.468e-3136.57A-Raf proto-oncogene serine/threonine-protein kina... [more]
SRK4_SPOLA1.918e-3134.50Tyrosine-protein kinase isoform SRK4 OS=Spongilla ... [more]
M3K12_RAT1.918e-3139.23Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_MOUSE1.918e-3139.23Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_HUMAN1.918e-3139.23Mitogen-activated protein kinase kinase kinase 12 ... [more]

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Properties
Property NameValue
Genbank descriptionC34205B05EF PostHarveN Citrus clementina cDNA clone C34205B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932146 ID=FC932146; Name=FC932146; organism=Citrus clementina; type=EST; length=698bp
GTTTTGGAATCTCCCATGTTCCAGAATAAACCTTTATTAGCTTATGAGGA
ATGGAACATTGACTTCTCTGAATTAACTGTGGGAACTCGTGTTGGAATTG
GTTTTTTCGGAGAAGTTTTTCGTGGCATATGGAATGGTACAGATGTTGCA
ATCAAGGTTTTCTTGGAGCAAGATCTAACAGCAGAAAACATGGAAGACTT
TTGCAATGAGATATCTATTCTAAGTCGTCTTCGGCATCCTAATGTTATCT
TATTTTTGGGTGCTTGCACAAAGCCTCCACGATTGTCAATGATTACTGAA
TACATGGAGCTGGGGTCCTTGTACCATTTGATTCATTTGAGTGGTCAAAA
AAAGAAGCTTAGCTGGAGGAGAAAATTTAAAATGCTACGTGATATATGCA
GGGGTTTGATGTGCATACACCGAATGAAGATAGTCCATCGTGACTTAAAA
AGTGCAAACTGTCTTGTGAATAAACACTGGACTGTCAAGATATGTGATTT
TGGGCTATCGAGAATAATAACGGACTCACCCATGAGAGACTCCTCATCTG
CTGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGCAATGAACCCTTC
ACAGAAAAATGTGATATTTTTAGCCTTGGGGTCATAATGTGGGAGCTCTG
CACTCTAAATAGACCATGGGAAGGTGTACTACCAGAAGGGTTGTTTAT
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