FC932149

Overview
NameFC932149
Unique NameFC932149
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932149 vs. ExPASy Swiss-Prot
Match: GPN3_ASHGO (GPN-loop GTPase 3 homolog AGL117C OS=Ashbya gossypii GN=AGL117C PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 9.566e-23
Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 3
Query:  114 VINLDPANDSLPYECAVNIEDLVKLSDVMMEHALGPNGGLVYCMDYLEKNIDWLQSKSEPLLKDHYLLFDFPGQVELF 347
            ++NLDPA ++  YE  V+I DL+ L DVM E +LGPNG LVYC +YL +N+DWL  +      D YL+FD PGQ+EL+
Sbjct:   36 IVNLDPAAEASEYEFTVDIRDLISLDDVMEELSLGPNGSLVYCFEYLLENLDWLDEEIGD-YNDEYLIFDCPGQIELY 112          

HSP 2 Score: 38.1206 bits (87), Expect = 9.566e-23
Identity = 19/60 (31.67%), Postives = 30/60 (50.00%), Query Frame = 1
Query:  373 VIMRLIKKLNLRLTAVHLVDAHLCSDPGKYVXXXXXXXXXXXXXXXPHVNVLSKIDLIEN 552
            ++  L  +LN  L A +L++A    D  K+                PH+NVLSK+DLI++
Sbjct:  121 IVRHLQNQLNFNLCASYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINVLSKVDLIKD 180          
BLAST of FC932149 vs. ExPASy Swiss-Prot
Match: GPN3_CANAL (GPN-loop GTPase 3 homolog CaO19.3130/CaO19.10642 OS=Candida albicans GN=CaO19.3130 PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.619e-22
Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 3
Query:  114 VINLDPANDSLPYECAVNIEDLVKLSDVMMEHALGPNGGLVYCMDYLEKNIDWLQSKSEPLLKDHYLLFDFPGQVELF 347
            ++NLDPA +   YE  ++++DL+ L DVM E  LGPNGGLVYC ++L  N+DWL  +      D YL+FD PGQ+EL+
Sbjct:   36 IVNLDPAANPTEYEFTIDVKDLISLQDVMEEMELGPNGGLVYCFEFLLNNLDWLDEEIGD-YNDEYLIFDCPGQIELY 112          

HSP 2 Score: 38.5058 bits (88), Expect = 1.619e-22
Identity = 29/100 (29.00%), Postives = 43/100 (43.00%), Query Frame = 1
Query:  373 VIMRLIKKLNLRLTAVHLVDAHLCSDPGKYVXXXXXXXXXXXXXXXPHVNVLSKIDLI-ENYGKLAFNLEYYTDVQDLSYLQHALGQDPRSAKYRKLTRS 669
            ++  L   LN  L A +L++A    D  K+                PH+N+LSKIDL+ + Y K         D      L  A  +D  + K+ KLT+S
Sbjct:  121 IVRHLQTSLNFNLCATYLLEAPFIIDNSKFFSGALSAMSAMILLELPHINILSKIDLVKDEYSKKQLKKFLNPDP-----LLLAKQEDYINPKFAKLTQS 215          
BLAST of FC932149 vs. ExPASy Swiss-Prot
Match: GPN3_KLULA (GPN-loop GTPase 3 homolog KLLA0D18557g OS=Kluyveromyces lactis GN=KLLA0D18557g PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.620e-22
Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 3
Query:  114 VINLDPANDSLPYECAVNIEDLVKLSDVMMEHALGPNGGLVYCMDYLEKNIDWLQSKSEPLLKDHYLLFDFPGQVELF 347
            ++NLDPA ++  YE  ++I DL+ L DVM E  LGPNG L+YC +YL  N+DWL  +      D YL+FD PGQ+EL+
Sbjct:   36 IVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSLIYCFEYLLNNLDWLDEEIGD-YNDEYLIFDCPGQIELY 112          

HSP 2 Score: 37.7354 bits (86), Expect = 1.620e-22
Identity = 17/60 (28.33%), Postives = 30/60 (50.00%), Query Frame = 1
Query:  373 VIMRLIKKLNLRLTAVHLVDAHLCSDPGKYVXXXXXXXXXXXXXXXPHVNVLSKIDLIEN 552
            ++  L  +LN  L A +L++A    D  K+                PH+N+LSK+DL+++
Sbjct:  121 IVRHLQNQLNFNLCATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKD 180          
BLAST of FC932149 vs. ExPASy Swiss-Prot
Match: GPN3_DEBHA (GPN-loop GTPase 3 homolog DEHA2G13222g OS=Debaryomyces hansenii GN=DEHA2G13222g PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 3.566e-22
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 3
Query:  114 VINLDPANDSLPYECAVNIEDLVKLSDVMMEHALGPNGGLVYCMDYLEKNIDWLQSKSEPLLKDHYLLFDFPGQVELF 347
            ++NLDPA +   YE  ++I DL+ L DVM E  LGPNG L+YC ++L  N+DWL  +      D YL+FD PGQ+EL+
Sbjct:   36 IVNLDPAAEPSEYEFTIDIRDLISLQDVMEEMDLGPNGALIYCFEFLMNNLDWLDEEIGD-FNDEYLIFDCPGQIELY 112          

HSP 2 Score: 39.6614 bits (91), Expect = 3.566e-22
Identity = 20/60 (33.33%), Postives = 29/60 (48.33%), Query Frame = 1
Query:  373 VIMRLIKKLNLRLTAVHLVDAHLCSDPGKYVXXXXXXXXXXXXXXXPHVNVLSKIDLIEN 552
            ++  L   LN  L A +L++A    D  K+                PH+N+LSKIDLI+N
Sbjct:  121 IVRHLQTSLNFNLCATYLLEAPFVIDRSKFFSGALSAMSAMILLELPHINILSKIDLIKN 180          
BLAST of FC932149 vs. ExPASy Swiss-Prot
Match: GPN3_GIBZE (GPN-loop GTPase 3 homolog FG00420 OS=Gibberella zeae GN=FG00420 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.245e-21
Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 3
Query:   33 PSGFQAASSLMAKKLIWALPFK*MKVAVINLDPANDSLPYECAVNIEDLVKLSDVMMEHALGPNGGLVYCMDYLEKNIDWLQSKSEPLLKDHYLLFDFPGQVELF 347
            P+G  A  S     LI  L         INLDPA +S  +E  ++I++L+ L D M E  LGPNGGL+YC ++L +N+DWL    E L +++ ++ D PGQ+EL+
Sbjct:   11 PAG--AGKSTFCAALITHLNLNRRSAFYINLDPAAESFEHEPDLDIKELISLKDAMEEVGLGPNGGLIYCFEFLMENLDWLTDALEGLTEEYLIIIDMPGQIELY 113          

HSP 2 Score: 35.8094 bits (81), Expect = 2.245e-21
Identity = 17/55 (30.91%), Postives = 29/55 (52.73%), Query Frame = 1
Query:  397 LNLRLTAVHLVDAHLCSDPGKYVXXXXXXXXXXXXXXXPHVNVLSKIDLIENYGK 561
            L++R+ AV+L++A    D  K+                PH+N+LSK+DL++   K
Sbjct:  132 LDVRMAAVYLLEATFVVDRAKFFSGTLSAMSAMLMLEVPHINILSKMDLVKGQVK 186          
BLAST of FC932149 vs. ExPASy Swiss-Prot
Match: GPN3_ASPFU (GPN-loop GTPase 3 homolog AFUA_1G10640 OS=Aspergillus fumigatus GN=AFUA_1G10640 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.432e-21
Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 3
Query:   33 PSGFQAASSLMAKKLIWALPFK*MKVAVINLDPANDSLPYECAVNIEDLVKLSDVMMEHALGPNGGLVYCMDYLEKNIDWLQSKSEPLLKDHYLLFDFPGQVELF 347
            P+G  A  S     LI  L         +NLDPA +S  YE  ++I +L+ L DVM E  LGPNGGL+YC ++L +N+D+L    +PL +++ ++FD PGQ+EL+
Sbjct:   11 PAG--AGKSTFCSALIQHLQTTRRSCFYVNLDPAAESFNYEPDLDIRELITLEDVMEEMELGPNGGLIYCFEFLLQNLDFLSQALDPLSEEYLIIFDMPGQIELY 113          

HSP 2 Score: 32.7278 bits (73), Expect = 6.432e-21
Identity = 21/77 (27.27%), Postives = 37/77 (48.05%), Query Frame = 1
Query:  397 LNLRLTAVHLVDAHLCSDPGKYVXXXXXXXXXXXXXXXPHVNVLSKIDLIENYGKLAFNLEYYTDVQDLSYLQHALG 627
            LN+ L A +L+++    D  K+                PHVN+LSK+D + +       L+ + +V D++ LQ  +G
Sbjct:  132 LNINLCAAYLLESTFVIDKAKFFAGTLSAMSAMLMLEMPHVNILSKMDQVRDMVSRK-ELKRFVNV-DVNLLQDEIG 206          
BLAST of FC932149 vs. ExPASy Swiss-Prot
Match: GPN3_RAT (GPN-loop GTPase 3 OS=Rattus norvegicus GN=Gpn3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.436e-21
Identity = 38/82 (46.34%), Postives = 56/82 (68.29%), Query Frame = 3
Query:  108 VAVINLDPANDSLPYECAVNIEDLVKLSDVMMEHAL--GPNGGLVYCMDYLEKNIDWLQSKSEPLLKDHYLLFDFPGQVELF 347
            V V+NLDPA +   Y    +I +L+++ DVM + +L  GPNGGLV+CM+Y   N DWL++     ++D Y+LFD PGQ+EL+
Sbjct:   34 VQVVNLDPAAEHFNYPVMADIRELIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLEN-CLGHVEDDYILFDCPGQIELY 114          

HSP 2 Score: 41.5874 bits (96), Expect = 6.436e-21
Identity = 26/106 (24.53%), Postives = 50/106 (47.17%), Query Frame = 1
Query:  349 FLHSNAKNVIMRLIKKLNLRLTAVHLVDAHLCSDPGKYVXXXXXXXXXXXXXXXPHVNVLSKIDLIENYGKLAFNLEYYTDVQDLSYLQHALGQDPRSAKYRKLTR 666
            + H      +++ +++   R+  V LVD+    +  K++               P VN+++K+DL+    K    +E + D    S L+ + G D RS K++KLT+
Sbjct:  114 YTHLPVMKQLVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKK--EIEKFLDPDMYSLLEDSTG-DLRSQKFKKLTK 216          
BLAST of FC932149 vs. ExPASy Swiss-Prot
Match: GPN3_YARLI (GPN-loop GTPase 3 homolog YALI0C20317g OS=Yarrowia lipolytica GN=YALI0C20317g PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 8.384e-21
Identity = 40/78 (51.28%), Postives = 57/78 (73.08%), Query Frame = 3
Query:  114 VINLDPANDSLPYECAVNIEDLVKLSDVMMEHALGPNGGLVYCMDYLEKNIDWLQSKSEPLLKDHYLLFDFPGQVELF 347
            ++NLDPA +   YE  V+I DL+ L+DVM E  LGPNGGL+YC ++L +N+DWL+ +     +D YL+FD PGQ+EL+
Sbjct:   36 IVNLDPAAEPNEYEFTVDIRDLISLNDVMEEMELGPNGGLMYCFEFLLQNMDWLEEELGE-FEDEYLIFDCPGQIELY 112          

HSP 2 Score: 31.9574 bits (71), Expect = 8.384e-21
Identity = 15/60 (25.00%), Postives = 29/60 (48.33%), Query Frame = 1
Query:  373 VIMRLIKKLNLRLTAVHLVDAHLCSDPGKYVXXXXXXXXXXXXXXXPHVNVLSKIDLIEN 552
            ++  L + +   L A ++++A    D  K+                PH+N+LSK+DLI++
Sbjct:  121 IVKHLQRHMGFSLCACYILEAPFVLDRPKFFSGVLSAMSAMILLETPHINILSKMDLIKD 180          
BLAST of FC932149 vs. ExPASy Swiss-Prot
Match: GPN3_MOUSE (GPN-loop GTPase 3 OS=Mus musculus GN=Gpn3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.089e-20
Identity = 38/82 (46.34%), Postives = 56/82 (68.29%), Query Frame = 3
Query:  108 VAVINLDPANDSLPYECAVNIEDLVKLSDVMMEHAL--GPNGGLVYCMDYLEKNIDWLQSKSEPLLKDHYLLFDFPGQVELF 347
            V V+NLDPA +   Y    +I +L+++ DVM + +L  GPNGGLV+CM+Y   N DWL++     ++D Y+LFD PGQ+EL+
Sbjct:   34 VQVVNLDPAAEHFNYPVMADIRELIEVDDVMEDESLRFGPNGGLVFCMEYFANNFDWLEN-CLGHVEDDYILFDCPGQIELY 114          

HSP 2 Score: 40.4318 bits (93), Expect = 1.089e-20
Identity = 25/107 (23.36%), Postives = 50/107 (46.73%), Query Frame = 1
Query:  349 FLHSNAKNVIMRLIKKLNLRLTAVHLVDAHLCSDPGKYVXXXXXXXXXXXXXXXPHVNVLSKIDLIENYGKLAFNLEYYTDVQDLSYLQHALGQDPRSAKYRKLTRS 669
            + H      +++ +++   R+  V LVD+    +  K++               P VN+++K+DL+    K    +E + D    S +  + G D RS K++KLT++
Sbjct:  114 YTHLPVMKQLVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMVSLEIPQVNIMTKMDLLSKKAKK--EIEKFLDPDMYSLIDDSTG-DLRSQKFKKLTKA 217          
BLAST of FC932149 vs. ExPASy Swiss-Prot
Match: GPN3_HUMAN (GPN-loop GTPase 3 OS=Homo sapiens GN=GPN3 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.843e-20
Identity = 38/82 (46.34%), Postives = 56/82 (68.29%), Query Frame = 3
Query:  108 VAVINLDPANDSLPYECAVNIEDLVKLSDVMMEHAL--GPNGGLVYCMDYLEKNIDWLQSKSEPLLKDHYLLFDFPGQVELF 347
            V V+NLDPA +   Y    +I +L+++ DVM + +L  GPNGGLV+CM+Y   N DWL++     ++D Y+LFD PGQ+EL+
Sbjct:   34 VQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLEN-CLGHVEDDYILFDCPGQIELY 114          

HSP 2 Score: 39.6614 bits (91), Expect = 1.843e-20
Identity = 25/107 (23.36%), Postives = 50/107 (46.73%), Query Frame = 1
Query:  349 FLHSNAKNVIMRLIKKLNLRLTAVHLVDAHLCSDPGKYVXXXXXXXXXXXXXXXPHVNVLSKIDLIENYGKLAFNLEYYTDVQDLSYLQHALGQDPRSAKYRKLTRS 669
            + H      +++ +++   R+  V LVD+    +  K++               P VN+++K+DL+    K    +E + D    S L+ +   D RS K++KLT++
Sbjct:  114 YTHLPVMKQLVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKK--EIEKFLDPDMYSLLEDST-SDLRSKKFKKLTKA 217          
The following BLAST results are available for this feature:
BLAST of FC932149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
GPN3_ASHGO9.566e-2352.56GPN-loop GTPase 3 homolog AGL117C OS=Ashbya gossyp... [more]
GPN3_CANAL1.619e-2250.00GPN-loop GTPase 3 homolog CaO19.3130/CaO19.10642 O... [more]
GPN3_KLULA1.620e-2250.00GPN-loop GTPase 3 homolog KLLA0D18557g OS=Kluyvero... [more]
GPN3_DEBHA3.566e-2248.72GPN-loop GTPase 3 homolog DEHA2G13222g OS=Debaryom... [more]
GPN3_GIBZE2.245e-2140.95GPN-loop GTPase 3 homolog FG00420 OS=Gibberella ze... [more]
GPN3_ASPFU6.432e-2141.90GPN-loop GTPase 3 homolog AFUA_1G10640 OS=Aspergil... [more]
GPN3_RAT6.436e-2146.34GPN-loop GTPase 3 OS=Rattus norvegicus GN=Gpn3 PE=... [more]
GPN3_YARLI8.384e-2151.28GPN-loop GTPase 3 homolog YALI0C20317g OS=Yarrowia... [more]
GPN3_MOUSE1.089e-2046.34GPN-loop GTPase 3 OS=Mus musculus GN=Gpn3 PE=2 SV=... [more]
GPN3_HUMAN1.843e-2046.34GPN-loop GTPase 3 OS=Homo sapiens GN=GPN3 PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC34205B08EF PostHarveN Citrus clementina cDNA clone C34205B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932149 ID=FC932149; Name=FC932149; organism=Citrus clementina; type=EST; length=711bp
AAGTACAGGTAATTCAGACCTCTGCGGTTCAACCGAGTGGTTTTCAAGCA
GCTTCCTCTTTGATGGCCAAAAAATTGATTTGGGCTTTGCCTTTTAAATG
AATGAAGGTTGCAGTCATCAACTTGGATCCTGCTAATGATAGTTTGCCAT
ATGAGTGTGCTGTGAATATCGAGGACCTCGTTAAACTAAGTGATGTGATG
ATGGAGCATGCACTCGGTCCAAATGGAGGTCTTGTGTATTGTATGGACTA
TCTAGAGAAGAATATTGACTGGTTGCAGTCAAAATCGGAACCACTTTTGA
AAGATCATTATCTTCTGTTTGATTTTCCTGGCCAAGTTGAATTATTTTTT
TCTTCATTCCAATGCCAAGAATGTTATCATGAGACTCATAAAGAAGTTAA
ATCTCAGGTTGACTGCAGTGCATCTAGTTGATGCGCATCTTTGCAGTGAC
CCTGGAAAGTATGTTAGTGCTTTGCTTCTCTCGTTGTCTACGATGCTACA
TCTGGAACTTCCCCACGTCAATGTCTTGTCTAAGATCGACTTGATTGAGA
ATTATGGAAAGCTAGCTTTTAATCTTGAGTACTATACGGATGTGCAAGAT
TTGTCGTATTTACAGCATGCTCTGGGTCAGGACCCTCGTTCTGCTAAGTA
CAGAAAGCTTACAAGGAGCTGTGTGATGTAATAGAGACTACAGTCTGGTC
AATTTTCACCT
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