FC932157

Overview
NameFC932157
Unique NameFC932157
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932157 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3)

HSP 1 Score: 206.068 bits (523), Expect = 1.471e-52
Identity = 90/139 (64.75%), Postives = 114/139 (82.01%), Query Frame = 2
Query:  137 RDFGRLQKDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 553
            RDF R+Q DPPAG+S +P  +N+M WNAVI GP DTP++ GTF+L + F E YPNKPP+V+F+S MFHPN+YA G +CLDILQN+WSP YDVAA+LTSIQSLL DPN  S AN EA+ L+ +N++EY++RVRE VE+SW
Sbjct:   11 RDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVRETVEKSW 149          
BLAST of FC932157 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.471e-52
Identity = 91/139 (65.47%), Postives = 114/139 (82.01%), Query Frame = 2
Query:  137 RDFGRLQKDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 553
            RDF R+Q DPPAG+S +P  +N+M WNAVI GP DTP++ GTF+L + F E YPNKPP V+F+S+MFHPN+Y  G +CLDILQN+WSP YDVAAILTSIQSLL DPN +SPAN EA+ L+ +N++EY +RVRE VE+SW
Sbjct:   11 RDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRETVEKSW 149          
BLAST of FC932157 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.921e-52
Identity = 91/139 (65.47%), Postives = 114/139 (82.01%), Query Frame = 2
Query:  137 RDFGRLQKDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 553
            RDF R+Q DPPAG+S +P  +N+M WNAVI GP DTP++ GTF+L + F E YPNKPP V+F+S+MFHPN+Y  G +CLDILQN+WSP YDVAAILTSIQSLL DPN +SPAN EA+ L+ +N++EY +RVRE VE+SW
Sbjct:   11 RDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYRDNRKEYIKRVRETVEKSW 149          
BLAST of FC932157 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.245e-51
Identity = 87/140 (62.14%), Postives = 116/140 (82.86%), Query Frame = 2
Query:  137 RDFGRLQKDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 556
            RDF R+Q+DPP G+S +P  +N++ WNAVI GP +TP++ GTF++ LQF E YPNKPP V+FVS+MFHPN+Y+ G +CLDILQN+WSP YDVAAILTS+QSLL DPN +SPAN EA+ L+ +++++Y +RVR+ VE SWT
Sbjct:   11 RDFKRMQQDPPQGVSASPVADNVLTWNAVIIGPAETPFEDGTFRMVLQFDEQYPNKPPAVKFVSQMFHPNVYSSGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNTSSPANVEASMLYKDHRQQYEKRVRDTVEASWT 150          
BLAST of FC932157 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.245e-51
Identity = 90/142 (63.38%), Postives = 115/142 (80.99%), Query Frame = 2
Query:  137 RDFGRLQKDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD 562
            RDF R+Q+D P+G+S +P  +N+M WNAVI GP DTP++ GTF+L LQF E YPNKPP+V+F+S MFHPN+YA G +CLDILQN+WSP YDV++ILTSIQSLL DPN +SPAN EAA L+ +++ +Y +RVRE VE SW  D
Sbjct:   11 RDFKRMQQDAPSGVSASPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANLYKDHRSQYIKRVRETVENSWNED 152          
BLAST of FC932157 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.774e-51
Identity = 89/142 (62.68%), Postives = 116/142 (81.69%), Query Frame = 2
Query:  137 RDFGRLQKDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD 562
            RDF R+++D P G+S +P  +N+M+WNA+I GP DTP++ GTF+L L+F E+YPNKPP V+F+S MFHPN+YA+G ICLDILQN+W+P YDVA+ILTSIQSL  DPNP SPAN EAA LF ++K +Y +RV+E VE+SW  D
Sbjct:   11 RDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFQDHKSQYVKRVKETVEKSWEDD 152          
BLAST of FC932157 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.774e-51
Identity = 89/139 (64.03%), Postives = 115/139 (82.73%), Query Frame = 2
Query:  137 RDFGRLQKDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 553
            RDF R+++D P G+S +P  +N+M+WNA+I GP DTP++ GTF+L L+F EDYPNKPP V+F+S MFHPN+YA+G ICLDILQN+W+P YDVA+ILTSIQSL  DPNP SPAN EAA LF ++K +Y +RV+E VE+SW
Sbjct:   11 RDFKRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYIKRVKETVEKSW 149          
BLAST of FC932157 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.774e-51
Identity = 90/144 (62.50%), Postives = 117/144 (81.25%), Query Frame = 2
Query:  137 RDFGRLQKDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD*K 568
            RDF R+++D P G+S +P  +N+M+WNA+I GP DTP++ GTF+L L+F E+YPNKPP V+F+S MFHPN+YA+G ICLDILQN+W+P YDVA+ILTSIQSL  DPNP SPAN EAA LF ++K +Y +RV+E VE+SW  D K
Sbjct:   11 RDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDDLK 154          
BLAST of FC932157 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.623e-51
Identity = 89/142 (62.68%), Postives = 116/142 (81.69%), Query Frame = 2
Query:  137 RDFGRLQKDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD 562
            RDF R+++D P G+S +P  +N+M+WNA+I GP DTP++ GTF+L L+F E+YPNKPP V+F+S MFHPN+YA+G ICLDILQN+W+P YDVA+ILTSIQSL  DPNP SPAN EAA LF ++K +Y +RV+E VE+SW  D
Sbjct:   11 RDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDD 152          
BLAST of FC932157 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.623e-51
Identity = 89/142 (62.68%), Postives = 113/142 (79.58%), Query Frame = 2
Query:  137 RDFGRLQKDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD 562
            RDF R+Q+DPP+G+S +P  +N+M WNAVI GP DTP++ GTF+L L F E YPNKPP V+F+S MFHPN+YA G +CLDILQN+WSP YDV++ILTS+QSLL DPN +SPAN EAA L+ +++  Y +RVRE VE SW  D
Sbjct:   11 RDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYKDHRSLYVKRVRETVENSWNDD 152          
The following BLAST results are available for this feature:
BLAST of FC932157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
UBC2_NEUCR1.471e-5264.75Ubiquitin-conjugating enzyme E2 2 OS=Neurospora cr... [more]
UBC2_ASPFU1.471e-5265.47Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus f... [more]
UBC2_EMENI1.921e-5265.47Ubiquitin-conjugating enzyme E2 2 OS=Emericella ni... [more]
UBC2_YARLI1.245e-5162.14Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipo... [more]
UBC2_DEBHA1.245e-5163.38Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces ... [more]
UBC2_KLULA2.774e-5162.68Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces... [more]
UBC2_CANGA2.774e-5164.03Ubiquitin-conjugating enzyme E2 2 OS=Candida glabr... [more]
UBC2_ASHGO2.774e-5162.50Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossyp... [more]
UBC2_YEAST3.623e-5162.68Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces... [more]
UBC2_CANAL3.623e-5162.68Ubiquitin-conjugating enzyme E2 2 OS=Candida albic... [more]

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Properties
Property NameValue
Genbank descriptionC34205C04EF PostHarveN Citrus clementina cDNA clone C34205C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932157 ID=FC932157; Name=FC932157; organism=Citrus clementina; type=EST; length=689bp
GACGAGATTCCTCCTCGCTCGATGATCTTACTGCTCACAATCTGATCCTC
CCCTCCTCTGCAAAAGCCGCTTCTCAGTTTTGCTCTGTCGGACGCCTCTA
TGCTCACAACGTGCTGAACACACCGGTTTGCATTGGCGGGACTTCGGGCG
CCTCCAAAAGGATCCACCCGCCGGAATCAGCGGGGCCCCTCAAGACAACA
ACATCATGTTATGGAACGCCGTTATTTTTGGGCCTGATGATACTCCCTGG
GACGGAGGTACGTTCAAGTTGACTCTTCAGTTTACAGAGGATTATCCGAA
TAAACCTCCAACAGTTCGGTTCGTTTCACGGATGTTTCATCCAAATATCT
ATGCGGATGGAAGTATCTGCCTGGATATATTACAAAATCAGTGGAGTCCT
ATATATGATGTTGCAGCTATACTGACCTCCATCCAGTCGCTGCTTTGTGA
TCCAAATCCAAACTCCCCTGCAAATTCTGAAGCAGCTCGGCTGTTTAGTG
AGAATAAACGAGAGTACAACCGAAGAGTGCGTGAAATAGTGGAGCAAAGC
TGGACAGCCGACTAAAAGTCCAATGAAAGCACCGGCCGGTTATGCAGTAG
AAATAAAAGATGAAAACTGGGGCTGGTGTGGCTGGTTTGTTCAATAGTCG
TGTACTCCGTAATCAATCTGATTTCAGGTGCATTGTTAT
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