FC932163

Overview
NameFC932163
Unique NameFC932163
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length646
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUS8_MOUSE (Dual specificity protein phosphatase 8 OS=Mus musculus GN=Dusp8 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.016e-12
Identity = 39/89 (43.82%), Postives = 54/89 (60.67%), Query Frame = 1
Query:  160 MTVPIRDMESENLLDYLDVCFDFIDRRRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFE 423
            M +PI D   E LL +LD   +FID+ +     V+VHC AG+SRSA I  AY+M+T  +SS+DA   ++    S+ PN  FL QL  +E
Sbjct:  209 MRIPINDNYCEKLLPWLDKSIEFIDKAKLSSCQVIVHCLAGISRSATIAIAYIMKTMGMSSDDAYRFVKDRRPSISPNFNFLGQLLEYE 297          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUS5_HUMAN (Dual specificity protein phosphatase 5 OS=Homo sapiens GN=DUSP5 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.263e-12
Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 1
Query:  166 VPIRDMESENLLDYLDVCFDFIDRRRKEGG-VLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFE 423
            +P+ D  + ++  +     DFID  R++GG VLVHC AG+SRS  I  AYLM+T+Q   ++A + ++Q    V PN GF+ QL  +E
Sbjct:  228 IPVEDSHTADISSHFQEAIDFIDCVREKGGKVLVHCEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFGFMGQLLQYE 314          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUSP2_DICDI (Probable dual specificity protein phosphatase DDB_G0283417 OS=Dictyostelium discoideum GN=DDB_G0283417 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.860e-12
Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 1
Query:  166 VPIRDMESENLLDYLDVCFDFIDRRR---KEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFEE 426
            V I D  + N+++  D CF+FID      +  G+LVHC AGVSRSA I+ +YLM+  ++    +LE L+ S     PN GFL+QL++FE+
Sbjct:  137 VEIFDDVNFNIIEKFDKCFEFIDSNIGGVENNGILVHCNAGVSRSATILISYLMKKLKIPLSLSLEILKSSRPQCKPNQGFLKQLEIFEK 226          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: PVH1_YEAST (Tyrosine-protein phosphatase YVH1 OS=Saccharomyces cerevisiae GN=YVH1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.042e-12
Identity = 55/183 (30.05%), Postives = 89/183 (48.63%), Query Frame = 1
Query:  166 VPIRDMESENLLDYLDVCFDFID------------------RRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFEEMGFK-VNRGSPIYKRFRLKVLGDSYNRGEKID--SSKFGADPGL--PVEVLSGVEAIPNGGDNRTPAYRX*KCRRVVA 645
            +PI D +  ++L Y D    FID                  ++ + G V  HC AG+SRS   I AYLM    LS   A+ ++++   SV PN+ F+EQL +FE+MG   V+  +P YK+++LK       +  K+D   S+  ++ G+    E    ++ +     ++  A R  KCR  +A
Sbjct:   65 IPIDDDDVTDVLQYFDETNRFIDQCLFPNEVEYSPRLVDFKKKPQRGAVFAHCQAGLSRSVTFIVAYLMYRYGLSLSMAMHAVKRKKPSVEPNENFMEQLHLFEKMGGDFVDFDNPAYKQWKLK-------QSIKLDPSGSELVSNSGMFKDSESSQDLDKLTEAEKSKVTAVRCKKCRTKLA 240          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: MPL1_DICDI (MAP kinase phosphatase with leucine-rich repeats protein 1 OS=Dictyostelium discoideum GN=mpl1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.042e-12
Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 1
Query:  160 MTVPIRDMESENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFEE 426
            + + I D++  N+  Y      FID  R++GGVL+HC AGVSRSA    AY+M    +  ++A +   +    + PN GFL QLK FE+
Sbjct:  742 LIINIDDVDEANIYQYFKEMNTFIDEGREKGGVLIHCRAGVSRSATATIAYIMMKNSVKFQEAFDITIKGRSRIYPNRGFLNQLKKFEK 830          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUS1_HUMAN (Dual specificity protein phosphatase 1 OS=Homo sapiens GN=DUSP1 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 8.600e-12
Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 1
Query:  163 TVPIRDMESENLLDYLDVCFDFIDRRRKEGG-VLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFE 423
            ++P+ D    ++  + +   DFID  +  GG V VHC AG+SRSA I  AYLMRT ++  ++A E ++Q    + PN  F+ QL  FE
Sbjct:  222 SIPVEDNHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFE 309          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUS7_RAT (Dual specificity protein phosphatase 7 (Fragment) OS=Rattus norvegicus GN=Dusp7 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.123e-11
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 1
Query:  166 VPIRDMESENLLDYLDVCFDFIDRRR-KEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFE 423
            +PI D  S+NL  +      FID  R K+ GVLVHC AG+SRS  +  AYLM+   LS  DA + +++   ++ PN  F+ QL  FE
Sbjct:  157 IPISDHWSQNLSQFFPEAISFIDEARSKKCGVLVHCLAGISRSVTVTVAYLMQKMNLSLNDAYDFVKRKKSNISPNFNFMGQLLDFE 243          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUS7_MOUSE (Dual specificity protein phosphatase 7 OS=Mus musculus GN=Dusp7 PE=2 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.123e-11
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 1
Query:  166 VPIRDMESENLLDYLDVCFDFIDRRR-KEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFE 423
            +PI D  S+NL  +      FID  R K+ GVLVHC AG+SRS  +  AYLM+   LS  DA + +++   ++ PN  F+ QL  FE
Sbjct:  245 IPISDHWSQNLSQFFPEAISFIDEARSKKCGVLVHCLAGISRSVTVTVAYLMQKMNLSLNDAYDFVKRKKSNISPNFNFMGQLLDFE 331          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUS7_HUMAN (Dual specificity protein phosphatase 7 OS=Homo sapiens GN=DUSP7 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.123e-11
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 1
Query:  166 VPIRDMESENLLDYLDVCFDFIDRRR-KEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFE 423
            +PI D  S+NL  +      FID  R K+ GVLVHC AG+SRS  +  AYLM+   LS  DA + +++   ++ PN  F+ QL  FE
Sbjct:  245 IPISDHWSQNLSQFFPEAISFIDEARSKKCGVLVHCLAGISRSVTVTVAYLMQKMNLSLNDAYDFVKRKKSNISPNFNFMGQLLDFE 331          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUS1_RAT (Dual specificity protein phosphatase 1 OS=Rattus norvegicus GN=Dusp1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.123e-11
Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 1
Query:  163 TVPIRDMESENLLDYLDVCFDFIDRRRKEGG-VLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFE 423
            ++P+ D    ++  + +   DFID  +  GG V VHC AG+SRSA I  AYLMRT ++  ++A E ++Q    + PN  F+ QL  FE
Sbjct:  222 SIPVEDNHKADISSWFNEAIDFIDSIKDAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFE 309          
The following BLAST results are available for this feature:
BLAST of FC932163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
DUS8_MOUSE1.016e-1243.82Dual specificity protein phosphatase 8 OS=Mus musc... [more]
DUS5_HUMAN2.263e-1241.38Dual specificity protein phosphatase 5 OS=Homo sap... [more]
DUSP2_DICDI3.860e-1243.33Probable dual specificity protein phosphatase DDB_... [more]
PVH1_YEAST5.042e-1230.05Tyrosine-protein phosphatase YVH1 OS=Saccharomyces... [more]
MPL1_DICDI5.042e-1239.33MAP kinase phosphatase with leucine-rich repeats p... [more]
DUS1_HUMAN8.600e-1239.77Dual specificity protein phosphatase 1 OS=Homo sap... [more]
DUS7_RAT1.123e-1142.53Dual specificity protein phosphatase 7 (Fragment) ... [more]
DUS7_MOUSE1.123e-1142.53Dual specificity protein phosphatase 7 OS=Mus musc... [more]
DUS7_HUMAN1.123e-1142.53Dual specificity protein phosphatase 7 OS=Homo sap... [more]
DUS1_RAT1.123e-1139.77Dual specificity protein phosphatase 1 OS=Rattus n... [more]

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Properties
Property NameValue
Genbank descriptionC34205C10EF PostHarveN Citrus clementina cDNA clone C34205C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932163 ID=FC932163; Name=FC932163; organism=Citrus clementina; type=EST; length=646bp
ATCCCCTCCAAGGAGATTAAGAAGGTTTATGCTGGTGGATCCGGTGATGG
TGGCTCGGGCTCTGTGGATGATCTAGGTGATGGGTCAAGAAGCTGTTTGT
CCCCCACAAAACTCTTGTACTCATTGGAATATGCTGGCAAGGATTTGAAG
CTGGTGAGAATGACTGTGCCTATAAGGGATATGGAAAGTGAGAATTTGTT
GGATTATTTGGATGTATGTTTTGATTTCATTGATCGGAGAAGAAAGGAGG
GGGGTGTTTTGGTTCATTGCTTTGCAGGAGTGTCCAGGAGTGCAGCTATC
ATTACAGCATATTTGATGAGAACTGAGCAACTATCTTCAGAAGATGCACT
TGAATCTCTACGGCAGAGCTGTGAGTCTGTTTGTCCCAATGATGGCTTTT
TAGAACAGTTGAAAATGTTTGAAGAAATGGGCTTTAAGGTCAATCGTGGT
AGCCCCATTTACAAGCGATTTCGCCTGAAAGTATTAGGTGATTCTTATAA
TCGTGGAGAGAAAATAGACAGTTCCAAATTTGGAGCTGATCCTGGCTTGC
CAGTGGAAGTTTTGTCAGGAGTAGAAGCAATTCCAAATGGAGGAGATAAT
CGTACCCCTGCGTACCGGTGNTAGAAATGTCGAAGAGTTGTTGCCT
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