FC932163

Overview
NameFC932163
Unique NameFC932163
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length646
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUS1_MOUSE (Dual specificity protein phosphatase 1 OS=Mus musculus GN=Dusp1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.123e-11
Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 1
Query:  163 TVPIRDMESENLLDYLDVCFDFIDRRRKEGG-VLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFE 423
            ++P+ D    ++  + +   DFID  +  GG V VHC AG+SRSA I  AYLMRT ++  ++A E ++Q    + PN  F+ QL  FE
Sbjct:  222 SIPVEDNHKADISSWFNEAIDFIDSIKDAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFE 309          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUS16_HUMAN (Dual specificity protein phosphatase 16 OS=Homo sapiens GN=DUSP16 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.123e-11
Identity = 35/90 (38.89%), Postives = 55/90 (61.11%), Query Frame = 1
Query:  160 MTVPIRDMESENLLDYLDVCFDFIDRRRKEGG-VLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFEE 426
            + VP+ D   E +L +LD   DFI++ +   G VLVHC AG+SRSA I  AY+M+   +S ++A   +++   ++ PN  FL QL  +E+
Sbjct:  207 LRVPVNDSFCEKILPWLDKSVDFIEKAKASNGCVLVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEK 296          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: MPL2_DICDI (MAP kinase phosphatase with leucine-rich repeats protein 2 OS=Dictyostelium discoideum GN=mpl2 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.467e-11
Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 1
Query:  160 MTVPIRDMESENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFEEMGFK 438
            + + I D++  N+  +      FID  R++GGVL+HC AGVSRSA+   A++M    L  ++A +   +    + PN GF+ QLK FE+  FK
Sbjct:  603 LIINIEDVDEANIYQHFKEMNAFIDEGREKGGVLIHCRAGVSRSASATMAFIMMKNSLKFQEAFDITIKGRPRIYPNIGFINQLKKFEKDLFK 695          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: SSH_DROME (Protein phosphatase Slingshot OS=Drosophila melanogaster GN=ssh PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.916e-11
Identity = 38/89 (42.70%), Postives = 52/89 (58.43%), Query Frame = 1
Query:  166 VPIRDMESENLLDYLDVCFDFIDRRRKEGG-VLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFEEM 429
            V + D E  NLL Y D  F +I R + EG  VLVHC  GVSRSA+++ AY M+  Q   + ALE +++    + PN  FL QL+ +  M
Sbjct:  433 VRVYDDEKTNLLKYWDDTFRYITRAKAEGSKVLVHCKMGVSRSASVVIAYAMKAYQWEFQQALEHVKKRRSCIKPNKNFLNQLETYSGM 521          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUS6_RAT (Dual specificity protein phosphatase 6 OS=Rattus norvegicus GN=Dusp6 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.916e-11
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 1
Query:  166 VPIRDMESENLLDYLDVCFDFIDRRR-KEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFE 423
            +PI D  S+NL  +      FID  R K  GVLVHC AG+SRS  +  AYLM+   LS  DA + ++    ++ PN  F+ QL  FE
Sbjct:  258 IPISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFE 344          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUS6_MOUSE (Dual specificity protein phosphatase 6 OS=Mus musculus GN=Dusp6 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.916e-11
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 1
Query:  166 VPIRDMESENLLDYLDVCFDFIDRRR-KEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFE 423
            +PI D  S+NL  +      FID  R K  GVLVHC AG+SRS  +  AYLM+   LS  DA + ++    ++ PN  F+ QL  FE
Sbjct:  258 IPISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFE 344          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUS6_HUMAN (Dual specificity protein phosphatase 6 OS=Homo sapiens GN=DUSP6 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.916e-11
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 1
Query:  166 VPIRDMESENLLDYLDVCFDFIDRRR-KEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFE 423
            +PI D  S+NL  +      FID  R K  GVLVHC AG+SRS  +  AYLM+   LS  DA + ++    ++ PN  F+ QL  FE
Sbjct:  258 IPISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFE 344          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUS6_BOVIN (Dual specificity protein phosphatase 6 OS=Bos taurus GN=DUSP6 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.916e-11
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 1
Query:  166 VPIRDMESENLLDYLDVCFDFIDRRR-KEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFE 423
            +PI D  S+NL  +      FID  R K  GVLVHC AG+SRS  +  AYLM+   LS  DA + ++    ++ PN  F+ QL  FE
Sbjct:  258 IPISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFE 344          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUS10_HUMAN (Dual specificity protein phosphatase 10 OS=Homo sapiens GN=DUSP10 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.268e-11
Identity = 35/88 (39.77%), Postives = 53/88 (60.23%), Query Frame = 1
Query:  166 VPIRDMESENLLDYLDVCFDFIDRRRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFEE 426
            +P  D   +NL  Y +  F+FI+   + G G+L+HC AGVSRSA I+ AYLM+  +++  DA + ++     + PN  F+ QL  FEE
Sbjct:  373 LPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEE 460          
BLAST of FC932163 vs. ExPASy Swiss-Prot
Match: DUS10_BOVIN (Dual specificity protein phosphatase 10 OS=Bos taurus GN=DUSP10 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.268e-11
Identity = 35/88 (39.77%), Postives = 53/88 (60.23%), Query Frame = 1
Query:  166 VPIRDMESENLLDYLDVCFDFIDRRRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSEDALESLRQSCESVCPNDGFLEQLKMFEE 426
            +P  D   +NL  Y +  F+FI+   + G G+L+HC AGVSRSA I+ AYLM+  +++  DA + ++     + PN  F+ QL  FEE
Sbjct:  373 LPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEE 460          
The following BLAST results are available for this feature:
BLAST of FC932163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
DUS1_MOUSE1.123e-1139.77Dual specificity protein phosphatase 1 OS=Mus musc... [more]
DUS16_HUMAN1.123e-1138.89Dual specificity protein phosphatase 16 OS=Homo sa... [more]
MPL2_DICDI1.467e-1137.63MAP kinase phosphatase with leucine-rich repeats p... [more]
SSH_DROME1.916e-1142.70Protein phosphatase Slingshot OS=Drosophila melano... [more]
DUS6_RAT1.916e-1142.53Dual specificity protein phosphatase 6 OS=Rattus n... [more]
DUS6_MOUSE1.916e-1142.53Dual specificity protein phosphatase 6 OS=Mus musc... [more]
DUS6_HUMAN1.916e-1142.53Dual specificity protein phosphatase 6 OS=Homo sap... [more]
DUS6_BOVIN1.916e-1142.53Dual specificity protein phosphatase 6 OS=Bos taur... [more]
DUS10_HUMAN4.268e-1139.77Dual specificity protein phosphatase 10 OS=Homo sa... [more]
DUS10_BOVIN4.268e-1139.77Dual specificity protein phosphatase 10 OS=Bos tau... [more]

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Properties
Property NameValue
Genbank descriptionC34205C10EF PostHarveN Citrus clementina cDNA clone C34205C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932163 ID=FC932163; Name=FC932163; organism=Citrus clementina; type=EST; length=646bp
ATCCCCTCCAAGGAGATTAAGAAGGTTTATGCTGGTGGATCCGGTGATGG
TGGCTCGGGCTCTGTGGATGATCTAGGTGATGGGTCAAGAAGCTGTTTGT
CCCCCACAAAACTCTTGTACTCATTGGAATATGCTGGCAAGGATTTGAAG
CTGGTGAGAATGACTGTGCCTATAAGGGATATGGAAAGTGAGAATTTGTT
GGATTATTTGGATGTATGTTTTGATTTCATTGATCGGAGAAGAAAGGAGG
GGGGTGTTTTGGTTCATTGCTTTGCAGGAGTGTCCAGGAGTGCAGCTATC
ATTACAGCATATTTGATGAGAACTGAGCAACTATCTTCAGAAGATGCACT
TGAATCTCTACGGCAGAGCTGTGAGTCTGTTTGTCCCAATGATGGCTTTT
TAGAACAGTTGAAAATGTTTGAAGAAATGGGCTTTAAGGTCAATCGTGGT
AGCCCCATTTACAAGCGATTTCGCCTGAAAGTATTAGGTGATTCTTATAA
TCGTGGAGAGAAAATAGACAGTTCCAAATTTGGAGCTGATCCTGGCTTGC
CAGTGGAAGTTTTGTCAGGAGTAGAAGCAATTCCAAATGGAGGAGATAAT
CGTACCCCTGCGTACCGGTGNTAGAAATGTCGAAGAGTTGTTGCCT
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