FC932166

Overview
NameFC932166
Unique NameFC932166
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length625
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig226 contig Ccv1_Contig226:4..628. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK2_ORYSJ (Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 7.710e-31
Identity = 70/154 (45.45%), Postives = 96/154 (62.34%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 471
            K AL+V+A  L+ EE+ GLK+ F  MDT+  G I               + EA+++ LMEAADVDG+GS+ Y EF+  ++H  K+  DEHL KAF +FD++ SGFI  +EL +AL  E +      I  I+ +VDTD DGRI+YEEF  MM+ G
Sbjct:  372 KMALKVIASNLNEEEIKGLKQMFTNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESAL-IEHEMGDTSTIKDIISEVDTDNDGRINYEEFCAMMRGG 524          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK2_MAIZE (Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 7.710e-31
Identity = 70/154 (45.45%), Postives = 96/154 (62.34%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 471
            K AL+V+A  L+ EE+ GLK+ F  MDT+  G I               + EA+++ LMEAADVDG+GS+ Y EF+  ++H  K+  DEHL KAF +FD++ SGFI  +EL +AL  E +      I  I+ +VDTD DGRI+YEEF  MM+ G
Sbjct:  353 KMALKVIASNLNEEEIKGLKQMFMNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESAL-IEHEMGDTSTIREIISEVDTDNDGRINYEEFCAMMRGG 505          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKY_ARATH (Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.007e-30
Identity = 69/154 (44.81%), Postives = 96/154 (62.34%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 471
            K AL+V+A  LS EE+ GLKE F+ MDT+  G I               + E ++Q LMEAAD DG+G++ YGEF+A ++H+ ++  +EHL+ AF  FD++ SG+I  EEL  AL +     G D I  I+ +VD D DGRI+YEEF  MM+ G
Sbjct:  356 KVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITTEELEQALREFGMNDGRD-IKEIISEVDGDNDGRINYEEFVAMMRKG 508          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKH_ARATH (Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.315e-30
Identity = 68/154 (44.16%), Postives = 97/154 (62.99%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 471
            K AL+V+A  LS EE+ GLKE F+ MDT+  G I               + E ++Q LMEAAD DG+G++ YGEF+A ++H+ ++  +EHL+ AF  FD++ SG+I +EEL  AL +     G D I  I+ +VD D DGRI+Y+EF  MM+ G
Sbjct:  361 KVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITMEELEQALREFGMNDGRD-IKEIISEVDGDNDGRINYDEFVAMMRKG 513          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK2_ARATH (Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.930e-30
Identity = 69/156 (44.23%), Postives = 99/156 (63.46%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV-INAIMHDVDTDKDGRISYEEFAVMMKAGT 474
            K AL+V+AE LS EE+AGLK+ F+M+D +  G+I              N+ E+++  LM+AADVD  G++ Y EF+A ++HL K+  ++HL  AFS+FD++ SGFI  +EL+ A     +   ED  I  +M DVD DKDGRI Y EF  MM+ G+
Sbjct:  474 KMALRVIAESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFSYFDKDESGFITPDELQQACE---EFGVEDARIEEMMRDVDQDKDGRIDYNEFVAMMQKGS 626          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK1_ARATH (Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana GN=CPK1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.930e-30
Identity = 75/177 (42.37%), Postives = 108/177 (61.02%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV-INAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKL 537
            K AL+V+AE LS EE+AGLKE F M+D +K G+I              N+ E+++  LM+AADVD  G++ Y EF+A ++HL K+  ++HL  AF++FD++ SG+I  +EL+ A     +   EDV I  +M DVD D DGRI Y EF  MM+ G+      +    + F SI+LKL
Sbjct:  438 KMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACE---EFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKGSITGGPVKMGLEKSF-SIALKL 610          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKT_ARATH (Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana GN=CPK29 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 4.997e-30
Identity = 66/155 (42.58%), Postives = 102/155 (65.81%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGT 474
            K AL+V+AE LS EE+ GLK+ F+ MDT++ G I               + E++++ LMEAADVD  G++ Y EFV  ++H  ++  +E+L +AF +FD++RSGFI  +EL++++  E     +  I+ +++DVDTD DGRI+YEEF  MM+ GT
Sbjct:  372 KLALKVIAENLSEEEIKGLKQTFKNMDTDESGTITFDELRNGLHRLGSKLTESEIKQLMEAADVDKSGTIDYIEFVTATMHRHRLEKEENLIEAFKYFDKDRSGFITRDELKHSMT-EYGMGDDATIDEVINDVDTDNDGRINYEEFVAMMRKGT 525          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK5_SOLTU (Calcium-dependent protein kinase 5 OS=Solanum tuberosum GN=CPK5 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 4.997e-30
Identity = 68/156 (43.59%), Postives = 96/156 (61.54%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDE--VDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 471
            K AL+V+AE LS EE+AGLKE F+ MDT+  G I               + + +++ LM+AADVD  G++ YGEF+A ++HL K+  +EHL  AF +FD++ SG+I ++EL+ A  D    D   ED+I     +VD D DGRI Y EF  MM+ G
Sbjct:  360 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRKYGSTLKDIEIRELMDAADVDNSGTIDYGEFIAATIHLNKLDREEHLMAAFQYFDKDGSGYITVDELQQACADHNITDVFFEDII----REVDQDNDGRIDYGEFVAMMQKG 511          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKQ_ARATH (Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.454e-29
Identity = 72/174 (41.38%), Postives = 105/174 (60.34%), Query Frame = 1
Query:   16 ALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDE--VDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRE-RFNSIS 528
            AL+V+AE LS EE+AGLKE F+ MDT+  G I               + + +++ LMEAAD+D  G++ YGEF+A ++HL K+  +EHL  AF +FD++ SG+I I+EL++A  ++   D   EDVI     +VD D DGRI Y EF  MM+ G   R   +  +   R N++S
Sbjct:  314 ALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADIDKSGTIDYGEFIAATIHLNKLEREEHLLSAFRYFDKDGSGYITIDELQHACAEQGMSDVFLEDVIK----EVDQDNDGRIDYGEFVAMMQKGIVGRTMRKSINMSIRNNAVS 483          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK9_ARATH (Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.899e-29
Identity = 65/164 (39.63%), Postives = 102/164 (62.20%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQY 501
            K AL+V+AE +  EE+ GLK  F  +DT+  G I               + EA+++ LM+AADVDG+GS+ Y EF+  ++H  ++ ++E+L+KAF  FD++ SG+I I+EL +AL  E     +  I  ++ DVD+D DGRI+YEEF  MM++G   ++  R +
Sbjct:  379 KLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFDKDSSGYITIDELESALK-EYGMGDDATIKEVLSDVDSDNDGRINYEEFCAMMRSGNPQQQQPRLF 541          
The following BLAST results are available for this feature:
BLAST of FC932166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
CDPK2_ORYSJ7.710e-3145.45Calcium-dependent protein kinase isoform 2 OS=Oryz... [more]
CDPK2_MAIZE7.710e-3145.45Calcium-dependent protein kinase 2 OS=Zea mays GN=... [more]
CDPKY_ARATH1.007e-3044.81Calcium-dependent protein kinase 34 OS=Arabidopsis... [more]
CDPKH_ARATH1.315e-3044.16Calcium-dependent protein kinase 17 OS=Arabidopsis... [more]
CDPK2_ARATH2.930e-3044.23Calcium-dependent protein kinase 2 OS=Arabidopsis ... [more]
CDPK1_ARATH2.930e-3042.37Calcium-dependent protein kinase 1 OS=Arabidopsis ... [more]
CDPKT_ARATH4.997e-3042.58Calcium-dependent protein kinase 29 OS=Arabidopsis... [more]
CDPK5_SOLTU4.997e-3043.59Calcium-dependent protein kinase 5 OS=Solanum tube... [more]
CDPKQ_ARATH1.454e-2941.38Calcium-dependent protein kinase 26 OS=Arabidopsis... [more]
CDPK9_ARATH1.899e-2939.63Calcium-dependent protein kinase 9 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC34205D01EF PostHarveN Citrus clementina cDNA clone C34205D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932166 ID=FC932166; Name=FC932166; organism=Citrus clementina; type=EST; length=625bp
CAAGCTTAAAAAAGAGCTCTACAAGTTGTGGCTGAGTTTTTGTCTGTGGA
GGAAGTGGCTGGCTTAAAGGAGGCATTTGAGATGATGGACACTAACAAGA
GAGGCAAGATAAACCTTGAGGAGCTAAGGCTTGGGTTGCTAAAAGGTGGC
CAAAATATTCCTGAGGCAGATCTTCAAATCCTCATGGAAGCTGCCGATGT
TGATGGTGACGGAAGTTTGACTTATGGAGAGTTTGTCGCAGTTTCTGTTC
ACCTTAAAAAGATGGCCAATGATGAACATCTGCATAAAGCTTTTTCATTC
TTTGATCGAAATCGGAGTGGTTTCATAGAGATTGAAGAGCTGAGAAATGC
CTTAAATGATGAAGTTGACACCAGTGGTGAAGATGTTATCAATGCCATTA
TGCATGATGTTGATACGGACAAGGATGGTCGCATAAGTTACGAGGAGTTT
GCCGTGATGATGAAGGCAGGTACTGATTGGAGAAAGGCGTCAAGGCAATA
TTCACGGGAAAGATTCAACAGTATAAGCTTGAAGTTAATGAGGGAGGAGG
GTTTACAGTTAGCCAACTGAGGGTAAAAGAACTGAAAGTTATCCGACGGG
CTAGCATATCGAGAAATTCACTTCT
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