FC932166

Overview
NameFC932166
Unique NameFC932166
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length625
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig226 contig Ccv1_Contig226:4..628. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CML2_ORYSJ (Putative calmodulin-like protein 2 OS=Oryza sativa subsp. japonica GN=CML2 PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 6.336e-17
Identity = 45/146 (30.82%), Postives = 83/146 (56.85%), Query Frame = 1
Query:   34 EFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 468
            + L+ E++A  +EAF + D +  G I             Q+  EA+L+ ++E  D DG GS+ + EF+ +    L+    ++ + +AF  FD++++GFI  +ELR+ + +  D   +D +  ++H+ D+D DG+I+Y EF  +M A
Sbjct:    2 DHLTKEQIAEFREAFNLFDKDGDGTITSKELGTVMGSLGQSPTEAELKKMVEEVDADGSGSIEFEEFLGLLARKLRDTGAEDDIREAFRVFDKDQNGFITPDELRHVMANLGDPLSDDELADMLHEADSDGDGQINYNEFLKVMMA 147          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CALM_MOUSC (Calmodulin OS=Mougeotia scalaris PE=2 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 6.336e-17
Identity = 44/148 (29.73%), Postives = 84/148 (56.76%), Query Frame = 1
Query:   28 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 468
            +A+ L+ E++A  KEAF + D +  G I             QN  EA+LQ ++   D DG+G++ + EF+ +    +K   ++E L +AF  FD++++G+I   + R+ + +  +   ++ ++ ++ + D D DG+++YEEF  MM A
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADWRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVKMMMA 148          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CALM_EPIAK (Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 6.336e-17
Identity = 44/148 (29.73%), Postives = 84/148 (56.76%), Query Frame = 1
Query:   28 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 468
            +A+ L+ E++A  KEAF + D +  G I             QN  EA+LQ ++   D DG+G++ + EF+ +    +K   ++E + +AF  FD++ +G+I   ELR+ + +  +   ++ ++ ++ + D D DG+++YEEF  +M A
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQIMTA 148          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CALM_EMENI (Calmodulin OS=Emericella nidulans GN=camA PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 6.336e-17
Identity = 45/146 (30.82%), Postives = 80/146 (54.79%), Query Frame = 1
Query:   28 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMM 462
            +A+ L+ E+V+  KEAF + D +  G+I             QN  E++LQ ++   D D +G++ + EF+ +    +K   ++E + +AF  FDR+ +GFI   ELR+ +    +   +D ++ ++ + D D DGRI Y EF  +M
Sbjct:    1 MADSLTEEQVSEYKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CALM_ASPOR (Calmodulin OS=Aspergillus oryzae GN=cmdA PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 6.336e-17
Identity = 45/146 (30.82%), Postives = 80/146 (54.79%), Query Frame = 1
Query:   28 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMM 462
            +A+ L+ E+V+  KEAF + D +  G+I             QN  E++LQ ++   D D +G++ + EF+ +    +K   ++E + +AF  FDR+ +GFI   ELR+ +    +   +D ++ ++ + D D DGRI Y EF  +M
Sbjct:    1 MADSLTEEQVSEYKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CALM_AJECG (Calmodulin OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=CAM1 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 6.336e-17
Identity = 45/146 (30.82%), Postives = 80/146 (54.79%), Query Frame = 1
Query:   28 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMM 462
            +A+ L+ E+V+  KEAF + D +  G+I             QN  E++LQ ++   D D +G++ + EF+ +    +K   ++E + +AF  FDR+ +GFI   ELR+ +    +   +D ++ ++ + D D DGRI Y EF  +M
Sbjct:    1 MADSLTEEQVSEYKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CALM6_ARATH (Calmodulin-6 OS=Arabidopsis thaliana GN=CAM6 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 6.336e-17
Identity = 45/148 (30.41%), Postives = 85/148 (57.43%), Query Frame = 1
Query:   28 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 468
            +A+ L+ ++++  KEAF + D +  G I             QN  EA+LQ ++   D DG+G++ + EF+ +    +K   ++E L +AF  FD++++GFI   ELR+ + +  +   ++ ++ ++ + D D DG+I+YEEF  +M A
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQINYEEFVKVMMA 148          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CALM3_PETHY (Calmodulin-related protein OS=Petunia hybrida GN=CAM53 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 6.336e-17
Identity = 49/166 (29.52%), Postives = 92/166 (55.42%), Query Frame = 1
Query:   28 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNS 522
            +A+ L+ ++++  KEAF + D +  G I             QN  EA+LQ ++   D DG+G++ + EF+ +    +K   ++E L +AF  FD++++GFI   ELR+ + +  +   ++ ++ ++ + D D DG+I+YEEF  +M A    R+   + S+   NS
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMANR--RRRRIEESKRSVNS 164          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CALM1_ARATH (Calmodulin-1/4 OS=Arabidopsis thaliana GN=CAM1 PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 6.336e-17
Identity = 46/148 (31.08%), Postives = 85/148 (57.43%), Query Frame = 1
Query:   28 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFV-AVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 468
            +A+ L+ E+++  KEAF + D +  G I             QN  EA+LQ ++   D DG+G++ + EF+  ++  +K   ++E L +AF  FD++++GFI   ELR+ + +  +   ++ +  ++ + D D DG+I+YEEF  +M A
Sbjct:    1 MADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEEFVKIMMA 148          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: TNNC2_CHICK (Troponin C, skeletal muscle OS=Gallus gallus GN=TNNC2 PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 8.275e-17
Identity = 51/147 (34.69%), Postives = 75/147 (51.02%), Query Frame = 1
Query:   37 FLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKM----ANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMK 465
            FLS E +A  K AF+M D +  G I+            QN  + +L  ++E  D DG G++ + EF+ + V   K      ++E L   F  FD+N  GFI+IEEL   L    +   E+ I  +M D D + DGRI ++EF  MM+
Sbjct:   14 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 160          
The following BLAST results are available for this feature:
BLAST of FC932166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
CML2_ORYSJ6.336e-1730.82Putative calmodulin-like protein 2 OS=Oryza sativa... [more]
CALM_MOUSC6.336e-1729.73Calmodulin OS=Mougeotia scalaris PE=2 SV=3[more]
CALM_EPIAK6.336e-1729.73Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3[more]
CALM_EMENI6.336e-1730.82Calmodulin OS=Emericella nidulans GN=camA PE=3 SV=... [more]
CALM_ASPOR6.336e-1730.82Calmodulin OS=Aspergillus oryzae GN=cmdA PE=3 SV=2[more]
CALM_AJECG6.336e-1730.82Calmodulin OS=Ajellomyces capsulata (strain ATCC 2... [more]
CALM6_ARATH6.336e-1730.41Calmodulin-6 OS=Arabidopsis thaliana GN=CAM6 PE=1 ... [more]
CALM3_PETHY6.336e-1729.52Calmodulin-related protein OS=Petunia hybrida GN=C... [more]
CALM1_ARATH6.336e-1731.08Calmodulin-1/4 OS=Arabidopsis thaliana GN=CAM1 PE=... [more]
TNNC2_CHICK8.275e-1734.69Troponin C, skeletal muscle OS=Gallus gallus GN=TN... [more]

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Properties
Property NameValue
Genbank descriptionC34205D01EF PostHarveN Citrus clementina cDNA clone C34205D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932166 ID=FC932166; Name=FC932166; organism=Citrus clementina; type=EST; length=625bp
CAAGCTTAAAAAAGAGCTCTACAAGTTGTGGCTGAGTTTTTGTCTGTGGA
GGAAGTGGCTGGCTTAAAGGAGGCATTTGAGATGATGGACACTAACAAGA
GAGGCAAGATAAACCTTGAGGAGCTAAGGCTTGGGTTGCTAAAAGGTGGC
CAAAATATTCCTGAGGCAGATCTTCAAATCCTCATGGAAGCTGCCGATGT
TGATGGTGACGGAAGTTTGACTTATGGAGAGTTTGTCGCAGTTTCTGTTC
ACCTTAAAAAGATGGCCAATGATGAACATCTGCATAAAGCTTTTTCATTC
TTTGATCGAAATCGGAGTGGTTTCATAGAGATTGAAGAGCTGAGAAATGC
CTTAAATGATGAAGTTGACACCAGTGGTGAAGATGTTATCAATGCCATTA
TGCATGATGTTGATACGGACAAGGATGGTCGCATAAGTTACGAGGAGTTT
GCCGTGATGATGAAGGCAGGTACTGATTGGAGAAAGGCGTCAAGGCAATA
TTCACGGGAAAGATTCAACAGTATAAGCTTGAAGTTAATGAGGGAGGAGG
GTTTACAGTTAGCCAACTGAGGGTAAAAGAACTGAAAGTTATCCGACGGG
CTAGCATATCGAGAAATTCACTTCT
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