FC932166
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: TNNC1_BOVIN (Troponin C, slow skeletal and cardiac muscles OS=Bos taurus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.254e-13 Identity = 48/153 (31.37%), Postives = 74/153 (48.37%), Query Frame = 1 Query: 22 QVVAEFLSVEEVAGLKEAFEMMDTNKR-GKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHL----KKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMK 465 + E L+ E+ K AF++ G I+ QN +LQ +++ D DG G++ + EF+ + V K ++E L F FD+N G+I++EEL+ L +T ED I +M D D + DGRI Y+EF MK Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CML7_ARATH (Calmodulin-like protein 7 OS=Arabidopsis thaliana GN=CML7 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.254e-13 Identity = 46/140 (32.86%), Postives = 73/140 (52.14%), Query Frame = 1 Query: 64 LKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAV--SVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGE--DVINAIMHDVDTDKDGRISYEEFAVMMKAG 471 LK F+M D N G I IP+ +L ++E DV+GDG + EF + ++ ++ +E + +AF+ FD+N GFI ++EL+ L+ G+ D ++ VD D DGR++Y+EF MMK G Sbjct: 6 LKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDEFGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKKMIKKVDVDGDGRVNYKEFRQMMKGG 145
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: TNNC1_CHICK (Troponin C, slow skeletal and cardiac muscles OS=Gallus gallus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.250e-13 Identity = 48/153 (31.37%), Postives = 73/153 (47.71%), Query Frame = 1 Query: 22 QVVAEFLSVEEVAGLKEAFEMMDTNKR-GKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHL----KKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMK 465 + E L+ E+ K AF++ G I+ QN +LQ +++ D DG G++ + EF+ + V K +E L F FD+N G+I++EEL+ L +T ED I +M D D + DGRI Y+EF MK Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: TNNC1_MOUSE (Troponin C, slow skeletal and cardiac muscles OS=Mus musculus GN=Tnnc1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.551e-13 Identity = 47/153 (30.72%), Postives = 74/153 (48.37%), Query Frame = 1 Query: 22 QVVAEFLSVEEVAGLKEAFEMMDTNKR-GKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHL----KKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMK 465 + E L+ E+ K AF++ G I+ QN +LQ +++ D DG G++ + EF+ + V K ++E L F FD+N G+I+++EL+ L +T ED I +M D D + DGRI Y+EF MK Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKMMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: TNNC1_RABIT (Troponin C, slow skeletal and cardiac muscles OS=Oryctolagus cuniculus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.250e-13 Identity = 47/153 (30.72%), Postives = 74/153 (48.37%), Query Frame = 1 Query: 22 QVVAEFLSVEEVAGLKEAFEMMDTNKR-GKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHL----KKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMK 465 + E L+ E+ K AF++ G I+ QN +LQ +++ D DG G++ + EF+ + V K ++E L F FD+N G+I+++EL+ L +T ED I +M D D + DGRI Y+EF MK Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: TNNC1_HUMAN (Troponin C, slow skeletal and cardiac muscles OS=Homo sapiens GN=TNNC1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.250e-13 Identity = 47/153 (30.72%), Postives = 74/153 (48.37%), Query Frame = 1 Query: 22 QVVAEFLSVEEVAGLKEAFEMMDTNKR-GKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHL----KKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMK 465 + E L+ E+ K AF++ G I+ QN +LQ +++ D DG G++ + EF+ + V K ++E L F FD+N G+I+++EL+ L +T ED I +M D D + DGRI Y+EF MK Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CALM2_SOLTU (Calmodulin-2/4 (Fragment) OS=Solanum tuberosum GN=PCM2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.468e-13 Identity = 35/107 (32.71%), Postives = 67/107 (62.62%), Query Frame = 1 Query: 151 QNIPEADLQILMEAADVDGDGSLTYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 468 QN EA+LQ ++ D DG+G++ + EF+ + +K ++E L +AF FD++++GFI ELR+ + + + ++ ++ ++ + D D DG+I+Y+EF +M A Sbjct: 17 QNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMA 123
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CML4_ARATH (Calmodulin-like protein 4 OS=Arabidopsis thaliana GN=CML4 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12 Identity = 42/143 (29.37%), Postives = 71/143 (49.65%), Query Frame = 1 Query: 49 EEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGE--DVINAIMHDVDTDKDGRISYEEFAVMMKAG 471 E LK F+M D N G+I +P+ DL +++ D +GDG + EF ++ + + + + AF+ FD++ GFI +EEL + + G+ + ++ VD D DGR++Y+EF MMK+G Sbjct: 47 ESPVDLKRVFQMFDKNGDGRITKEELNDSLENLGIFMPDKDLIQMIQKMDANGDGCVDINEFESLYGSIVEEKEEGDMRDAFNVFDQDGDGFITVEELNSVMTSLGLKQGKTLECCKEMIMQVDEDGDGRVNYKEFLQMMKSG 189
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: TNNC2_PONLE (Troponin C, isotype gamma OS=Pontastacus leptodactylus PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.615e-12 Identity = 43/145 (29.66%), Postives = 72/145 (49.66%), Query Frame = 1 Query: 40 LSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDE----HLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMM 462 L E+++ LK+AF+ DT+ +G I I E +LQ ++ D DG G L + EFV ++ ++E L +AF +D+ G+I + LR L + + ED ++ I+ +VD D G + ++EF MM Sbjct: 4 LDEEQLSALKKAFDSFDTDSKGFITPETVGVILRMMGVKISEKNLQQVIAETDEDGSGELEFEEFVELAAKFLIEEDEEALKAELKEAFRIYDKGGDGYITTDVLREILRELDNRLTEDDLDGIIEEVDEDGSGTLDFDEFMEMM 148
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: TNNC2_CAEEL (Troponin C, isoform 2 OS=Caenorhabditis elegans GN=tnc-2 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.109e-12 Identity = 42/148 (28.38%), Postives = 73/148 (49.32%), Query Frame = 1 Query: 34 EFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVA-VSVHLKKMANDE----HLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMM 462 E LS +++ ++ F M D +G I Q E DL+ L++ D DG G + + EF A V+ + NDE L +AF +D+ +G+I + +LR+ L D E+ ++ ++ ++D D G + ++EF MM Sbjct: 10 EKLSADQIEQFRKYFNMFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLIKEFDADGSGEIEFEEFAAMVANFVVNNENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFMEMM 157 The following BLAST results are available for this feature:
BLAST of FC932166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 210
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932166 ID=FC932166; Name=FC932166; organism=Citrus clementina; type=EST; length=625bpback to top |