FC932166

Overview
NameFC932166
Unique NameFC932166
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length625
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig226 contig Ccv1_Contig226:4..628. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKL_ARATH (Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.480e-29
Identity = 66/155 (42.58%), Postives = 98/155 (63.23%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGT 474
            K AL+V+AE LS EE+ GLK  F  +DT+K G I               + E +++ LMEAADVDG+G++ Y EF++ ++H  K+  DEH++KAF  FD++ SG I  +EL +A+  E     E  I  ++ +VDTD DGRI++EEF  MM++G+
Sbjct:  367 KLALKVIAESLSEEEIKGLKTMFANIDTDKSGTITYEELKTGLTRLGSRLSETEVKQLMEAADVDGNGTIDYYEFISATMHRYKLDRDEHVYKAFQHFDKDNSGHITRDELESAMK-EYGMGDEASIKEVISEVDTDNDGRINFEEFCAMMRSGS 520          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKC_ARATH (Calcium-dependent protein kinase 12 OS=Arabidopsis thaliana GN=CPK12 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.480e-29
Identity = 66/154 (42.86%), Postives = 98/154 (63.64%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 471
            K AL+V+AE LS EE+ GLKE F+M+DT+K G I               + E+++Q L+ AADVD  G++ YGEF+A ++HL K+  +E+L  AFSFFD++ SG+I IEEL+ A  +      +  ++ ++ D+D D DG+I Y EF  MM+ G
Sbjct:  310 KMALRVIAERLSEEEIGGLKELFKMIDTDKSGTITFEELKDSMRRVGSELMESEIQELLRAADVDESGTIDYGEFLAATIHLNKLEREENLVAAFSFFDKDASGYITIEELQQAWKE--FGINDSNLDEMIKDIDQDNDGQIDYGEFVAMMRKG 461          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK4_SOLTU (Calcium-dependent protein kinase 4 OS=Solanum tuberosum GN=CPK4 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.480e-29
Identity = 73/187 (39.04%), Postives = 108/187 (57.75%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNAL--NDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTD--WRKASRQYSRERFNSISLKLMREEGLQ 558
            K AL+V+AE LS EE+AGL+E F+ MDT+  G I               + + +++ LM+AADVD  G++ YGEF+A +VHL K+  +EHL  AF +FD++ SG+I ++E++ A   ++  D   ED+I     +VD D DGRI Y EF  MM+ G     R+  R       NS++L +    G Q
Sbjct:  382 KMALRVIAESLSEEEIAGLREMFKAMDTDSSGAITFDELKAGLRKYGSTLKDTEIRELMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLMAAFQYFDKDGSGYITVDEVQQACIEHNMTDVYFEDII----REVDQDNDGRIDYGEFVAMMQKGNPCIGRRTMR-------NSLNLSMRDAPGAQ 557          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK6_ARATH (Calcium-dependent protein kinase 6 OS=Arabidopsis thaliana GN=CPK6 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.239e-29
Identity = 67/156 (42.95%), Postives = 95/156 (60.90%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDE--VDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 471
            K AL+V+AE LS EE+AGL+  FE MDT+  G I               + + +++ LMEAADVD  G++ Y EF+A ++HL K+  +EHL  AF +FD++ SG+I I+EL+ +  +    D   ED+I     +VD D DGRI YEEF  MM+ G
Sbjct:  373 KMALKVIAESLSEEEIAGLRAMFEAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYSEFIAATIHLNKLEREEHLVSAFQYFDKDGSGYITIDELQQSCIEHGMTDVFLEDIIK----EVDQDNDGRIDYEEFVAMMQKG 524          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK4_ARATH (Calcium-dependent protein kinase 4 OS=Arabidopsis thaliana GN=CPK4 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.424e-29
Identity = 67/172 (38.95%), Postives = 104/172 (60.47%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALND--EVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFN 519
            K AL+V+AE LS EE+ GLKE F+M+DT+  G I               + E++++ LM+AAD+D  G++ YGEF+A ++H+ KM  +E+L  AFS+FD++ SG+I I+EL+ A  +    DT  +D+I     ++D D DG+I + EF  MMK G    ++    +   FN
Sbjct:  313 KMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKAGLKRVGSELMESEIKSLMDAADIDNSGTIDYGEFLAATLHINKMEREENLVVAFSYFDKDGSGYITIDELQQACTEFGLCDTPLDDMIK----EIDLDNDGKIDFSEFTAMMKKGDGVGRSRTMRNNLNFN 480          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK_SOYBN (Calcium-dependent protein kinase SK5 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.231e-28
Identity = 64/155 (41.29%), Postives = 101/155 (65.16%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV-INAIMHDVDTDKDGRISYEEFAVMMKAG 471
            K AL+V+AE LS EE+ GLKE F+M+DT+  G I               + E++++ LM+AAD+D  G++ YGEF+A +VHL K+  +E+L  AFS+FD++ SG+I ++E++ A     D   +D+ I+ ++ ++D D DG+I Y EFA MM+ G
Sbjct:  322 KMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACK---DFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKG 473          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKN_ARATH (Calcium-dependent protein kinase 23 OS=Arabidopsis thaliana GN=CPK23 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.100e-28
Identity = 67/164 (40.85%), Postives = 100/164 (60.98%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQY 501
            K AL+V A  LS EE+ GLK  F  MDTN+ G I               + E ++Q L+EA+DVDG+G++ Y EF++ ++H  K+ +DEH+HKAF   D++++G I  +EL +A+  E     E  I  ++ +VDTD DG+I++EEF  MM+ GT   K  +QY
Sbjct:  356 KLALKVSAVSLSEEEIKGLKTLFANMDTNRSGTITYEQLQTGLSRLRSRLSETEVQQLVEASDVDGNGTIDYYEFISATMHRYKLHHDEHVHKAFQHLDKDKNGHITRDELESAMK-EYGMGDEASIKEVISEVDTDNDGKINFEEFRAMMRCGTTQPK-GKQY 517          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK5_ARATH (Calcium-dependent protein kinase 5 OS=Arabidopsis thaliana GN=CPK5 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.042e-27
Identity = 65/156 (41.67%), Postives = 94/156 (60.26%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDE--VDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 471
            K AL+V+AE LS EE+AGL+E F+ MDT+  G I               + + ++  LM+AADVD  G++ Y EF+A ++HL K+  +EHL  AF +FD++ SGFI I+EL+ A  +    D   ED+I     +VD + DG+I Y EF  MM+ G
Sbjct:  385 KMALKVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRKYGSTLKDTEIHDLMDAADVDNSGTIDYSEFIAATIHLNKLEREEHLVAAFQYFDKDGSGFITIDELQQACVEHGMADVFLEDIIK----EVDQNNDGKIDYGEFVEMMQKG 536          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKB_ARATH (Calcium-dependent protein kinase 11 OS=Arabidopsis thaliana GN=CPK11 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.777e-27
Identity = 66/172 (38.37%), Postives = 102/172 (59.30%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALND--EVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFN 519
            K AL+V+AE LS EE+ GLKE F+M+DT+  G I               + E++++ LM+AAD+D  G++ YGEF+A ++H+ KM  +E L  AFS FD++ SG+I I+EL++A  +    DT  +D+I     ++D D DG+I + EF  MM+ G    ++        FN
Sbjct:  314 KMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKAGLKRVGSELMESEIKSLMDAADIDNSGTIDYGEFLAATLHMNKMEREEILVAAFSDFDKDGSGYITIDELQSACTEFGLCDTPLDDMIK----EIDLDNDGKIDFSEFTAMMRKGDGVGRSRTMMKNLNFN 481          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK_DAUCA (Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.321e-27
Identity = 66/157 (42.04%), Postives = 96/157 (61.15%), Query Frame = 1
Query:   16 ALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRK 486
            AL+V+AE LS EE+ GLK  F  MDT+K G I               + E ++Q LM+AADVDG+G++ Y EF+  ++H  K+ + E  H+AF +FD++ SGFI  +EL +A+  E     E  I  I+ +VD+D DGRI+Y+EF  MM+   + RK
Sbjct:  371 ALKVIAESLSEEEIKGLKSMFANMDTDKSGTITYEELKSGLARLGSKLSEVEVQQLMDAADVDGNGTIDYLEFITATMHRHKLESYE--HQAFQYFDKDNSGFITKDELESAMK-EYGMGDEATIKDIISEVDSDNDGRINYDEFCAMMRRARNRRK 524          
The following BLAST results are available for this feature:
BLAST of FC932166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
CDPKL_ARATH2.480e-2942.58Calcium-dependent protein kinase 21 OS=Arabidopsis... [more]
CDPKC_ARATH2.480e-2942.86Calcium-dependent protein kinase 12 OS=Arabidopsis... [more]
CDPK4_SOLTU2.480e-2939.04Calcium-dependent protein kinase 4 OS=Solanum tube... [more]
CDPK6_ARATH3.239e-2942.95Calcium-dependent protein kinase 6 OS=Arabidopsis ... [more]
CDPK4_ARATH9.424e-2938.95Calcium-dependent protein kinase 4 OS=Arabidopsis ... [more]
CDPK_SOYBN1.231e-2841.29Calcium-dependent protein kinase SK5 OS=Glycine ma... [more]
CDPKN_ARATH2.100e-2840.85Calcium-dependent protein kinase 23 OS=Arabidopsis... [more]
CDPK5_ARATH1.042e-2741.67Calcium-dependent protein kinase 5 OS=Arabidopsis ... [more]
CDPKB_ARATH1.777e-2738.37Calcium-dependent protein kinase 11 OS=Arabidopsis... [more]
CDPK_DAUCA2.321e-2742.04Calcium-dependent protein kinase OS=Daucus carota ... [more]

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Properties
Property NameValue
Genbank descriptionC34205D01EF PostHarveN Citrus clementina cDNA clone C34205D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932166 ID=FC932166; Name=FC932166; organism=Citrus clementina; type=EST; length=625bp
CAAGCTTAAAAAAGAGCTCTACAAGTTGTGGCTGAGTTTTTGTCTGTGGA
GGAAGTGGCTGGCTTAAAGGAGGCATTTGAGATGATGGACACTAACAAGA
GAGGCAAGATAAACCTTGAGGAGCTAAGGCTTGGGTTGCTAAAAGGTGGC
CAAAATATTCCTGAGGCAGATCTTCAAATCCTCATGGAAGCTGCCGATGT
TGATGGTGACGGAAGTTTGACTTATGGAGAGTTTGTCGCAGTTTCTGTTC
ACCTTAAAAAGATGGCCAATGATGAACATCTGCATAAAGCTTTTTCATTC
TTTGATCGAAATCGGAGTGGTTTCATAGAGATTGAAGAGCTGAGAAATGC
CTTAAATGATGAAGTTGACACCAGTGGTGAAGATGTTATCAATGCCATTA
TGCATGATGTTGATACGGACAAGGATGGTCGCATAAGTTACGAGGAGTTT
GCCGTGATGATGAAGGCAGGTACTGATTGGAGAAAGGCGTCAAGGCAATA
TTCACGGGAAAGATTCAACAGTATAAGCTTGAAGTTAATGAGGGAGGAGG
GTTTACAGTTAGCCAACTGAGGGTAAAAGAACTGAAAGTTATCCGACGGG
CTAGCATATCGAGAAATTCACTTCT
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