FC932166

Overview
NameFC932166
Unique NameFC932166
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length625
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig226 contig Ccv1_Contig226:4..628. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKX_ARATH (Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.321e-27
Identity = 62/154 (40.26%), Postives = 95/154 (61.69%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 471
            K AL+V+AE +  EE+ GLK  F  +DT+  G I               + EA+++ LM+AADVDG+GS+ Y EF+  ++H  ++ ++E+++KAF  FD++ SG+I  +EL  AL  E     +  I  I+ DVD D DGRI+Y+EF  MM++G
Sbjct:  361 KLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSRLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENVYKAFQHFDKDGSGYITTDELEAALK-EYGMGDDATIKEILSDVDADNDGRINYDEFCAMMRSG 513          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKK_ARATH (Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana GN=CPK20 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.821e-27
Identity = 64/153 (41.83%), Postives = 96/153 (62.75%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV-INAIMHDVDTDKDGRISYEEFAVMMK 465
            K A++V+AE LS EE+AGLKE F+M+DT+  G I              ++ ++++  LM+AAD+D  G++ YGEF+A  VHL K+  ++HL  AFS+FD++ SG+I  +EL+ A          DV ++ I+ +VD D DGRI Y EF  MM+
Sbjct:  422 KIAIKVIAESLSEEEIAGLKEMFKMIDTDNSGHITLEELKKGLDRVGADLKDSEILGLMQAADIDNSGTIDYGEFIAAMVHLNKIEKEDHLFTAFSYFDQDGSGYITRDELQQACK---QFGLADVHLDDILREVDKDNDGRIDYSEFVDMMQ 571          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKM_ARATH (Calcium-dependent protein kinase 22 OS=Arabidopsis thaliana GN=CPK22 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 3.352e-26
Identity = 63/154 (40.91%), Postives = 92/154 (59.74%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 471
            K AL+V+AE LS EE+ GLK  FE MD +K G I               + E +++ LMEAADVDG+G++ Y EF++ ++H  ++  DEHL+KAF +FD++ SG I  EE+  A+  E     E     ++ + D + DG+I YEEF  MM+ G
Sbjct:  333 KLALKVIAEGLSEEEIKGLKTMFENMDMDKSGSITYEELKMGLNRHGSKLSETEVKQLMEAADVDGNGTIDYIEFISATMHRHRLERDEHLYKAFQYFDKDGSGHITKEEVEIAMK-EHGMGDEANAKDLISEFDKNNDGKIDYEEFCTMMRNG 485          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKV_ARATH (Calcium-dependent protein kinase 31 OS=Arabidopsis thaliana GN=CPK31 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 9.753e-26
Identity = 61/155 (39.35%), Postives = 95/155 (61.29%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGT 474
            K AL+V+A  LS EE+ GLK  F  +DT+K G I              N+ + +++ LMEAADVDG+G++   EF++ ++H  ++  D+H+++AF  FD++  G I  EEL  A+  E     E  I  I+ +VDTD DG+I++EEF  MM++G+
Sbjct:  319 KVALKVIAANLSEEEIKGLKTLFTNIDTDKSGTITLEELKTGLTRLGSNLSKTEVEQLMEAADVDGNGTIDIDEFISATMHRYRLDRDDHVYQAFQHFDKDNDGHITKEELEMAMK-EHGVGDEVSIKQIITEVDTDNDGKINFEEFRTMMRSGS 472          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKR_ARATH (Calcium-dependent protein kinase 27 OS=Arabidopsis thaliana GN=CPK27 PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 3.706e-25
Identity = 59/152 (38.82%), Postives = 90/152 (59.21%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMK 465
            K  L+ +A  LS EE+ GLK  F  +DT+K G I              N+ + +++ LMEAAD+DG+G++   EF++ ++H  K+  DEH++KAF  FD++  G I  EEL  A+ ++     E  I  I+ D DTD DG+I++EEF  MM+
Sbjct:  319 KVVLKFIAANLSEEEIKGLKTLFTNIDTDKSGNITLEELKTGLTRLGSNLSKTEVEQLMEAADMDGNGTIDIDEFISATMHRYKLDRDEHVYKAFQHFDKDNDGHITKEELEMAMKED-GAGDEGSIKQIIADADTDNDGKINFEEFRTMMR 469          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKJ_ARATH (Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana GN=CPK19 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.318e-22
Identity = 56/153 (36.60%), Postives = 91/153 (59.48%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 468
            K A + +A+ L  EE+ GLK  F  MDT+K G I               + E +++ L+E ADVDG+G++ Y EF++ +++  ++  +++L KAF  FD++ SGFI  +EL  A+  E +   + +I  I+ +VD D DG I+Y+EF  MMK+
Sbjct:  387 KLAFKFIAQNLKEEELKGLKTMFANMDTDKSGTITYDELKSGLEKLGSRLTETEVKQLLEDADVDGNGTIDYIEFISATMNRFRVEREDNLFKAFQHFDKDNSGFISRQELETAMK-EYNMGDDIMIKEIISEVDADNDGSINYQEFCNMMKS 538          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKB_ORYSJ (Calcium-dependent protein kinase isoform 11 OS=Oryza sativa subsp. japonica GN=CPK11 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 3.835e-22
Identity = 56/161 (34.78%), Postives = 93/161 (57.76%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMK---AGTDWR 483
            K AL+V+AE LS EE+AGL+E F+ +DT  RG I                 + ++  +MEAA  D + ++ Y EF+A ++ L K+  +EHL  AF++FD++ SG+I +++L+ A  +      + ++  I+ +VD + DG+I Y EF  MM+    G  W+
Sbjct:  367 KLALRVIAERLSEEEIAGLREMFKAVDTKNRGVITFGELREGLRRFGAEFKDTEIGDIMEAAHNDNNVTIHYEEFIAATLPLNKIEREEHLLAAFTYFDKDGSGYITVDKLQRACGEH--NMEDSLLEEIISEVDQNNDGQIDYAEFVAMMQGSNVGLGWQ 525          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK1_ORYSJ (Calcium-dependent protein kinase isoform 1 OS=Oryza sativa subsp. japonica GN=SPK PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.969e-19
Identity = 56/162 (34.57%), Postives = 94/162 (58.02%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV-INAIMHDVDTDKDGRISYEEFAVMMKA---GTDWR 483
            K +LQ++AE LS EE+ GL+E F+ MDT  R  +                 + ++  LMEAAD D   ++ + EF+A +V L K+  ++HL  AF++FD++ SGFI +++L+ A    ++ + ED  +  ++ +VD + DG+I Y EF  MM++   G  W+
Sbjct:  361 KLSLQIIAERLSEEEIVGLREMFKAMDTKNRSVVTFGELKGLKRYSSV-FKDTEINDLMEAAD-DTTSTINWEEFIAAAVSLNKIEREKHLMAAFTYFDKDGSGFITVDKLQKAC---MERNMEDTFLEEMILEVDQNNDGQIDYAEFVTMMQSNNFGLGWQ 517          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CALM_CHLRE (Calmodulin OS=Chlamydomonas reinhardtii PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.970e-18
Identity = 47/147 (31.97%), Postives = 84/147 (57.14%), Query Frame = 1
Query:   34 EFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 471
            E L+ E++A  KEAF + D +  G I             QN  EA+LQ ++   D DG+G++ + EF+ +    +K+  +++ L +AF  FD++ +GFI   ELR+ + +  +   E+ ++ ++ + D D DG+++YEEF  MM +G
Sbjct:    6 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMISEVDADGNGTIDFPEFLMLMARKMKETDHEDELREAFKVFDKDGNGFISAAELRHVMTNLGEKLSEEEVDEMIREADVDGDGQVNYEEFVRMMTSG 152          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CALM_PROMN (Calmodulin OS=Prorocentrum minimum PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.572e-18
Identity = 49/148 (33.11%), Postives = 84/148 (56.76%), Query Frame = 1
Query:   28 VAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVH-LKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKA 468
            +A+ L+ E++A  KEAF + D +  G I             QN  EA+LQ ++   D DG+G++ + EF+++    +K    +E L +AF  FDR+ +GFI   ELR+ + +  +   ++ ++ ++ + D D DG+I+YEEF  MM A
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMA 148          
The following BLAST results are available for this feature:
BLAST of FC932166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
CDPKX_ARATH2.321e-2740.26Calcium-dependent protein kinase 33 OS=Arabidopsis... [more]
CDPKK_ARATH8.821e-2741.83Calcium-dependent protein kinase 20 OS=Arabidopsis... [more]
CDPKM_ARATH3.352e-2640.91Calcium-dependent protein kinase 22 OS=Arabidopsis... [more]
CDPKV_ARATH9.753e-2639.35Calcium-dependent protein kinase 31 OS=Arabidopsis... [more]
CDPKR_ARATH3.706e-2538.82Calcium-dependent protein kinase 27 OS=Arabidopsis... [more]
CDPKJ_ARATH1.318e-2236.60Calcium-dependent protein kinase 19 OS=Arabidopsis... [more]
CDPKB_ORYSJ3.835e-2234.78Calcium-dependent protein kinase isoform 11 OS=Ory... [more]
CDPK1_ORYSJ3.969e-1934.57Calcium-dependent protein kinase isoform 1 OS=Oryz... [more]
CALM_CHLRE1.970e-1831.97Calmodulin OS=Chlamydomonas reinhardtii PE=1 SV=2[more]
CALM_PROMN2.572e-1833.11Calmodulin OS=Prorocentrum minimum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34205D01EF PostHarveN Citrus clementina cDNA clone C34205D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932166 ID=FC932166; Name=FC932166; organism=Citrus clementina; type=EST; length=625bp
CAAGCTTAAAAAAGAGCTCTACAAGTTGTGGCTGAGTTTTTGTCTGTGGA
GGAAGTGGCTGGCTTAAAGGAGGCATTTGAGATGATGGACACTAACAAGA
GAGGCAAGATAAACCTTGAGGAGCTAAGGCTTGGGTTGCTAAAAGGTGGC
CAAAATATTCCTGAGGCAGATCTTCAAATCCTCATGGAAGCTGCCGATGT
TGATGGTGACGGAAGTTTGACTTATGGAGAGTTTGTCGCAGTTTCTGTTC
ACCTTAAAAAGATGGCCAATGATGAACATCTGCATAAAGCTTTTTCATTC
TTTGATCGAAATCGGAGTGGTTTCATAGAGATTGAAGAGCTGAGAAATGC
CTTAAATGATGAAGTTGACACCAGTGGTGAAGATGTTATCAATGCCATTA
TGCATGATGTTGATACGGACAAGGATGGTCGCATAAGTTACGAGGAGTTT
GCCGTGATGATGAAGGCAGGTACTGATTGGAGAAAGGCGTCAAGGCAATA
TTCACGGGAAAGATTCAACAGTATAAGCTTGAAGTTAATGAGGGAGGAGG
GTTTACAGTTAGCCAACTGAGGGTAAAAGAACTGAAAGTTATCCGACGGG
CTAGCATATCGAGAAATTCACTTCT
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