FC932168
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932168 vs. ExPASy Swiss-Prot
Match: TDCF_SHIFL (Protein tdcF OS=Shigella flexneri GN=tdcF PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.278e-21 Identity = 48/126 (38.10%), Postives = 79/126 (62.70%), Query Frame = 3 Query: 231 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF---PSPAPARATYQVAALPLDARVEIECIA 599 +K+ + T +AP A+GPY Q + ++VF SG + + P+TG+ +D ++DQ L+N+ I+ A+G ++K T+ + DL DF T+NE+Y ++F + P R+ QVA LP D ++EIE IA Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPAD-VQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIA 125
BLAST of FC932168 vs. ExPASy Swiss-Prot
Match: TDCF_ECOLI (Protein tdcF OS=Escherichia coli (strain K12) GN=tdcF PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.278e-21 Identity = 48/126 (38.10%), Postives = 79/126 (62.70%), Query Frame = 3 Query: 231 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF---PSPAPARATYQVAALPLDARVEIECIA 599 +K+ + T +AP A+GPY Q + ++VF SG + + P+TG+ +D ++DQ L+N+ I+ A+G ++K T+ + DL DF T+NE+Y ++F + P R+ QVA LP D ++EIE IA Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPAD-VQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIA 125
BLAST of FC932168 vs. ExPASy Swiss-Prot
Match: TDCF_ECOL6 (Protein tdcF OS=Escherichia coli O6 GN=tdcF PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.278e-21 Identity = 48/126 (38.10%), Postives = 79/126 (62.70%), Query Frame = 3 Query: 231 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF---PSPAPARATYQVAALPLDARVEIECIA 599 +K+ + T +AP A+GPY Q + ++VF SG + + P+TG+ +D ++DQ L+N+ I+ A+G ++K T+ + DL DF T+NE+Y ++F + P R+ QVA LP D ++EIE IA Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPAD-VQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIA 125
BLAST of FC932168 vs. ExPASy Swiss-Prot
Match: YVN1_AZOVI (UPF0076 protein in vnfA 5'region OS=Azotobacter vinelandii PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21 Identity = 52/124 (41.94%), Postives = 76/124 (61.29%), Query Frame = 3 Query: 234 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAAL 605 K + T+KAPAA+G YSQAI+A + V++SG + L P T + V E QT +V +N+ +++A+G ++ +VK I L DL F NE +YF P PARA A+LP A+VE++ I L Sbjct: 3 KSVINTDKAPAAIGTYSQAIRAGDTVYLSGQIPLDPGTMELVEGDFEAQTVRVFENLKAVVEAAGGSFADIVKLNIFLTDLAHFANGNECMGRYFAQPYPARAAIACASLPRGAQVEMDGILVL 126
BLAST of FC932168 vs. ExPASy Swiss-Prot
Match: MMF1_YEAST (Protein MMF1, mitochondrial OS=Saccharomyces cerevisiae GN=MMF1 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20 Identity = 53/123 (43.09%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 243 VVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAALPN 611 V T AP A YSQA+KANN V+VSG + P+ K V +I ++ EQV +N+ IL S + ++VK + LAD+K+F N +YAK+F + PAR+ VA+LPL+ +E+E IA N Sbjct: 24 VSTKLAPPAAASYSQAMKANNFVYVSGQIPYTPDN-KPVQGSISEKAEQVFQNVKNILAESNSSLDNIVKVNVFLADMKNFAEFNSVYAKHFHTHKPARSCVGVASLPLNVDLEMEVIAVEKN 145
BLAST of FC932168 vs. ExPASy Swiss-Prot
Match: MMF1_SCHPO (Protein mmf1, mitochondrial OS=Schizosaccharomyces pombe GN=mmf1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.468e-20 Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 3 Query: 264 AALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLD---ARVEIECIA 599 ++ GPY+QAIKAN +++ SG + + GK + T+ DQT Q L N+ E+L +G+ + +VK I LAD+ DF VN++Y + P P PAR+ V +PL ++EIECIA Sbjct: 48 SSAGPYNQAIKANGVIYCSGQIPVA--NGKVIEGTVGDQTRQCLLNLQEVLTEAGSSLNKIVKVNIFLADMDDFAAVNKVYTEVLPDPKPARSCVAVKTVPLSTQGVKIEIECIA 160
BLAST of FC932168 vs. ExPASy Swiss-Prot
Match: MMF2_SCHPO (Protein mmf2, mitochondrial OS=Schizosaccharomyces pombe GN=mmf2 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20 Identity = 46/113 (40.71%), Postives = 70/113 (61.95%), Query Frame = 3 Query: 273 GPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDA---RVEIECIAA 602 GPY+QA+K+ L+F SG + + G FV TI++QT ++N+ E+L+ +G+ +VK I L D+ DF +NE+Y + P P PAR T +PL + ++EIECIAA Sbjct: 15 GPYNQAVKSGGLIFCSGQAAV--KDGNFVPGTIQEQTRLTIENLAEVLRVAGSSLEKLVKVNIFLTDIDDFAAMNEVYKEMLPDPMPARTTVAAGKIPLSSKGGKIEIECIAA 125
BLAST of FC932168 vs. ExPASy Swiss-Prot
Match: YJGF_SHIFL (UPF0076 protein yjgF OS=Shigella flexneri GN=yjgF PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 49/126 (38.89%), Postives = 75/126 (59.52%), Query Frame = 3 Query: 231 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP---SPAPARATYQVAALPLDARVEIECIA 599 + + + T APAA+GPY Q + N++ SG + + P+TG+ +D + Q Q L N+ I++A+G +VKTT+ + DL DF TVN Y +F + PAR+ +VA LP D ++EIE IA Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPAD-VAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIA 125
BLAST of FC932168 vs. ExPASy Swiss-Prot
Match: YJGF_ECOLI (UPF0076 protein yjgF OS=Escherichia coli (strain K12) GN=yjgF PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 49/126 (38.89%), Postives = 75/126 (59.52%), Query Frame = 3 Query: 231 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP---SPAPARATYQVAALPLDARVEIECIA 599 + + + T APAA+GPY Q + N++ SG + + P+TG+ +D + Q Q L N+ I++A+G +VKTT+ + DL DF TVN Y +F + PAR+ +VA LP D ++EIE IA Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPAD-VAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIA 125
BLAST of FC932168 vs. ExPASy Swiss-Prot
Match: YJGF_ECOL6 (UPF0076 protein yjgF OS=Escherichia coli O6 GN=yjgF PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 49/126 (38.89%), Postives = 75/126 (59.52%), Query Frame = 3 Query: 231 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP---SPAPARATYQVAALPLDARVEIECIA 599 + + + T APAA+GPY Q + N++ SG + + P+TG+ +D + Q Q L N+ I++A+G +VKTT+ + DL DF TVN Y +F + PAR+ +VA LP D ++EIE IA Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPAD-VAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIA 125 The following BLAST results are available for this feature:
BLAST of FC932168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932168 ID=FC932168; Name=FC932168; organism=Citrus clementina; type=EST; length=701bpback to top |