FC932176

Overview
NameFC932176
Unique NameFC932176
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_SHEPA (Adenine phosphoribosyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=apt PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.699e-44
Identity = 84/160 (52.50%), Postives = 119/160 (74.38%), Query Frame = 1
Query:   10 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            +A I ++I+ IP++PK GI+F+D+T+LL D +A++ TI L VE YKD+  + V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG DV+E+HV A+ A ++ L++DDL+ATG T+ A ++L+ ++G  V + A VI LP+L G ERL
Sbjct:    8 LALIKNSIKTIPNYPKEGILFRDVTSLLEDPQAYKLTIGLLVEHYKDQGFTKVVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINADDKVLVIDDLLATGGTIEATVKLIRKLGGSVNDAAFVISLPDLGGEERL 167          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_CLONN (Adenine phosphoribosyltransferase OS=Clostridium novyi (strain NT) GN=apt PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.699e-44
Identity = 87/166 (52.41%), Postives = 118/166 (71.08%), Query Frame = 1
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 516
            +   IRVI  FPK GI F+DITT+L D +A + T+D  VE  KDKN+ VV G EARGF+FG P+A A+GA FVP+RK  KLP E IS EY LEYG DV+++H  A++ G++  IVDDL+ATG T+++ I ++E++G  VV    +IEL +LKGRE++G   +  LV
Sbjct:    3 LKEKIRVIEGFPKEGISFKDITTVLNDKEALKYTVDAIVEHLKDKNVDVVVGPEARGFLFGTPVAYALGAAFVPVRKKGKLPCETISSEYDLEYGSDVLQIHKDAIKKGQKVAIVDDLLATGGTMNSVIEMIEKLGGEVVSVDFLIELTDLKGREKIGNYDIMSLV 168          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_SHIFL (Adenine phosphoribosyltransferase OS=Shigella flexneri GN=apt PE=3 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 9.721e-44
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISENYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_SHIF8 (Adenine phosphoribosyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=apt PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.721e-44
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISENYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_SHISS (Adenine phosphoribosyltransferase OS=Shigella sonnei (strain Ss046) GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_SHIDS (Adenine phosphoribosyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_SHIBS (Adenine phosphoribosyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_SHIB3 (Adenine phosphoribosyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_SHEHH (Adenine phosphoribosyltransferase OS=Shewanella halifaxensis (strain HAW-EB4) GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 88/170 (51.76%), Postives = 124/170 (72.94%), Query Frame = 1
Query:   10 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 519
            +A I ++I+ IP++PK GI+F+D+T+LL D +A++ TI L VE YKD+  + V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG DV+E+HV A+ A ++ L++DDL+ATG T+ A ++L+ ++G  V + A VI LP+L G +RL EK    LVS
Sbjct:    8 LALIKNSIKTIPNYPKEGILFRDVTSLLEDPQAYKLTIGLLVEHYKDQGFTKVVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINAEDKVLVIDDLLATGGTIEATVKLIRQLGGSVNDAAFVISLPDLGGEQRL-EKMDLKLVS 176          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_MANSM (Adenine phosphoribosyltransferase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=apt PE=3 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 92/170 (54.12%), Postives = 125/170 (73.53%), Query Frame = 1
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRER---LGEKPLFVLVS 519
            I S+I+ IP+ PK GI+F+DIT+L+   +AF+ T+DL V  YK++ I+ V G E+RGFIFG P+ALA+G  FV +RKP+KLP E IS+ Y LEYG+D +EMHV +V+AG+  LI+DDL+ATG T+ A I+L++R+G  V   A VI LPEL G ER   LG +P F LV+
Sbjct:    8 IKSSIKSIPNHPKEGIIFRDITSLIEVPEAFQATVDLIVGNYKNQGITKVVGTESRGFIFGAPVALALGLPFVLVRKPRKLPRETISQSYQLEYGEDTLEMHVDSVKAGDNVLIIDDLLATGGTVDATIKLIKRLGGDVKHAAFVINLPELGGEERLRSLGVEP-FTLVN 176          
The following BLAST results are available for this feature:
BLAST of FC932176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_SHEPA5.699e-4452.50Adenine phosphoribosyltransferase OS=Shewanella pe... [more]
APT_CLONN5.699e-4452.41Adenine phosphoribosyltransferase OS=Clostridium n... [more]
APT_SHIFL9.721e-4452.87Adenine phosphoribosyltransferase OS=Shigella flex... [more]
APT_SHIF89.721e-4452.87Adenine phosphoribosyltransferase OS=Shigella flex... [more]
APT_SHISS1.270e-4352.87Adenine phosphoribosyltransferase OS=Shigella sonn... [more]
APT_SHIDS1.270e-4352.87Adenine phosphoribosyltransferase OS=Shigella dyse... [more]
APT_SHIBS1.270e-4352.87Adenine phosphoribosyltransferase OS=Shigella boyd... [more]
APT_SHIB31.270e-4352.87Adenine phosphoribosyltransferase OS=Shigella boyd... [more]
APT_SHEHH1.270e-4351.76Adenine phosphoribosyltransferase OS=Shewanella ha... [more]
APT_MANSM1.270e-4354.12Adenine phosphoribosyltransferase OS=Mannheimia su... [more]

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Properties
Property NameValue
Genbank descriptionC34205D11EF PostHarveN Citrus clementina cDNA clone C34205D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932176 ID=FC932176; Name=FC932176; organism=Citrus clementina; type=EST; length=693bp
GACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCCAGACTT
CCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTCTTGATA
CCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTACAAGGAC
AAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTATATTTGG
GCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGAGGAAAC
CTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTGGAATAT
GGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCG
TGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGAGACCTTGTCTGCTG
CAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGC
GTGATTGAACTGCCAGAGCTAAAGGGTCGGGAACGGCTGGGAGAGAAACC
ACTATTTGTTCTTGTAAGCTAAACTTGACCTCAGGTTATGGTTTAAATGC
AATGTTTGTGGACCATATGGGTTTCTAGTCGCTCGGGCTCTGCTCAAAGC
TTGAGAACTTCATAAAACCATCTGGTAATATAAGAGCAGTTTCATTGGCT
TTTTATTTTATTTAGACGTTGGGGAAAGAGTGGTGGGGAAGCT
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