FC932176

Overview
NameFC932176
Unique NameFC932176
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15112 contig Ccv1_Contig15112:207..899. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_ESCF3 (Adenine phosphoribosyltransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1 
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVTDAAFIINLFDLGGEQRL 167
[Close]
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_ECOUT (Adenine phosphoribosyltransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=apt PE=3 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1 
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167
[Close]
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_ECOSM (Adenine phosphoribosyltransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1 
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167
[Close]
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_ECOSE (Adenine phosphoribosyltransferase OS=Escherichia coli (strain SE11) GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1 
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167
[Close]
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_ECOLU (Adenine phosphoribosyltransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1 
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167
[Close]
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_ECOLI (Adenine phosphoribosyltransferase OS=Escherichia coli (strain K12) GN=apt PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1 
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167
[Close]
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_ECOLC (Adenine phosphoribosyltransferase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1 
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167
[Close]
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_ECOL6 (Adenine phosphoribosyltransferase OS=Escherichia coli O6 GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1 
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167
[Close]
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_ECOL5 (Adenine phosphoribosyltransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=apt PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1 
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167
[Close]
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_ECOK1 (Adenine phosphoribosyltransferase OS=Escherichia coli O1:K1 / APEC GN=apt PE=3 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 83/157 (52.87%), Postives = 117/157 (74.52%), Query Frame = 1 
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            + ++I+ I D+PKPGI+F+D+T+LL D KA+  +IDL VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATG T+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   11 LKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167
The following BLAST results are available for this feature:
BLAST of FC932176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_ESCF31.270e-4352.87Adenine phosphoribosyltransferase OS=Escherichia f... [more]
APT_ECOUT1.270e-4352.87Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOSM1.270e-4352.87Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOSE1.270e-4352.87Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOLU1.270e-4352.87Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOLI1.270e-4352.87Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOLC1.270e-4352.87Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOL61.270e-4352.87Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOL51.270e-4352.87Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOK11.270e-4352.87Adenine phosphoribosyltransferase OS=Escherichia c... [more]

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Properties
Property NameValue
Genbank descriptionC34205D11EF PostHarveN Citrus clementina cDNA clone C34205D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932176 ID=FC932176; Name=FC932176; organism=Citrus clementina; type=EST; length=693bp
GACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCCAGACTT
CCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTCTTGATA
CCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTACAAGGAC
AAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTATATTTGG
GCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGAGGAAAC
CTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTGGAATAT
GGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCG
TGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGAGACCTTGTCTGCTG
CAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGC
GTGATTGAACTGCCAGAGCTAAAGGGTCGGGAACGGCTGGGAGAGAAACC
ACTATTTGTTCTTGTAAGCTAAACTTGACCTCAGGTTATGGTTTAAATGC
AATGTTTGTGGACCATATGGGTTTCTAGTCGCTCGGGCTCTGCTCAAAGC
TTGAGAACTTCATAAAACCATCTGGTAATATAAGAGCAGTTTCATTGGCT
TTTTATTTTATTTAGACGTTGGGGAAAGAGTGGTGGGGAAGCT
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