FC932177
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_MOUSE (Malate dehydrogenase, mitochondrial OS=Mus musculus GN=Mdh2 PE=1 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 1.756e-22 Identity = 61/118 (51.69%), Postives = 77/118 (65.25%), Query Frame = 2 Query: 353 SFLNKESCSALRSTFARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 S L + + +ALR +F+ AQ++ KVAVLGA+GGIGQPL+LL+K SPLVS L LYD+ + GVAADLSH T + V + GPE+L LKG +VVVIPAGV K G Sbjct: 3 SALARPAGAALRRSFSTSAQNNA-------------KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPG 107
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_BOVIN (Malate dehydrogenase, mitochondrial OS=Bos taurus GN=MDH2 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.294e-22 Identity = 61/118 (51.69%), Postives = 77/118 (65.25%), Query Frame = 2 Query: 353 SFLNKESCSALRSTFARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 S L + + +ALR +F+ AQ++ KVAVLGA+GGIGQPL+LL+K SPLVS L LYD+ + GVAADLSH T + V + GPE+L LKG +VVVIPAGV K G Sbjct: 3 SALARPAGAALRRSFSTSAQNNA-------------KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPG 107
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.294e-22 Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 2 Query: 458 FKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 FKVA+LGAAGGIGQPLA+L+KM+PLVS LHLYDV N GV AD+SH +T + V F G +L AL G+++V+IPAGV K G Sbjct: 43 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVANAPGVTADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGVPRKPG 125
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_PONAB (Malate dehydrogenase, mitochondrial OS=Pongo abelii GN=MDH2 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.996e-22 Identity = 60/118 (50.85%), Postives = 76/118 (64.41%), Query Frame = 2 Query: 353 SFLNKESCSALRSTFARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 S L + + + LR +F+ AQ++ KVAVLGA+GGIGQPL+LL+K SPLVS L LYD+ + GVAADLSH T + V + GPE+L LKG +VVVIPAGV K G Sbjct: 3 SALARPASAVLRRSFSTSAQNNA-------------KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPG 107
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_CITLA (Malate dehydrogenase, mitochondrial OS=Citrullus lanatus GN=MMDH PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.996e-22 Identity = 57/110 (51.82%), Postives = 76/110 (69.09%), Query Frame = 2 Query: 380 ALRSTFARKAQSSEQRPQN-ALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 ++RS +R + S+ ++ A + KVAVLGAAGGIGQPLALL+K++PLVS L LYD+ GVAAD+ H NT S+V + G E+L AL+G +VV+IPAGV K G Sbjct: 8 SVRSAVSRSSSSNRLLSRSFATESVPERKVAVLGAAGGIGQPLALLMKLNPLVSKLALYDIAGTPGVAADVGHVNTRSEVTGYVGEEQLGKALEGSDVVIIPAGVPRKPG 117
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.996e-22 Identity = 51/85 (60.00%), Postives = 67/85 (78.82%), Query Frame = 2 Query: 452 ASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 + FKVA+LGAAGGIGQPLA+L+KM+PLVS LHLYDV+N GV +D+SH +T + V F G ++L AL G+++V+IPAGV K G Sbjct: 40 SGFKVAILGAAGGIGQPLAMLMKMNPLVSLLHLYDVVNTPGVTSDISHMDTGAVVRGFLGQQQLEDALIGMDLVIIPAGVPRKPG 124
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_RAT (Malate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Mdh2 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22 Identity = 59/110 (53.64%), Postives = 73/110 (66.36%), Query Frame = 2 Query: 377 SALRSTFARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 +ALR +F+ AQ++ KVAVLGA+GGIGQPL+LL+K SPLVS L LYD+ + GVAADLSH T + V + GPE+L LKG +VVVIPAGV K G Sbjct: 11 AALRRSFSTSAQNNA-------------KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPG 107
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM2_ARATH (Malate dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=At3g15020 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22 Identity = 55/112 (49.11%), Postives = 74/112 (66.07%), Query Frame = 2 Query: 371 SCSALRSTFARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 S S ++ R+ +SE P KV +LGAAGGIGQPL+LL+K++PLVS+L LYD+ N GVAAD+ H NT SQV + G ++L AL+G ++V+IPAGV K G Sbjct: 9 SASPVKQGLLRRGFASESVPDR--------KVVILGAAGGIGQPLSLLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSQVSGYMGDDDLGKALEGADLVIIPAGVPRKPG 112
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_PIG (Malate dehydrogenase, mitochondrial OS=Sus scrofa GN=MDH2 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.675e-22 Identity = 59/106 (55.66%), Postives = 73/106 (68.87%), Query Frame = 2 Query: 389 STFARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 S AR A ++ +R + Q + KVAVLGA+GGIGQPL+LL+K SPLVS L LYD+ + GVAADLSH T + V + GPE+L LKG +VVVIPAGV K G Sbjct: 3 SALARPAGAALRRSFST-SXQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPG 107
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21 Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = 2 Query: 458 FKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 FKVA+LGAAGGIGQ L+LL+KM+PLVS LHLYDV+N GV AD+SH +T + V F G ++L AL G+++V+IPAGV K G Sbjct: 47 FKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPG 129 The following BLAST results are available for this feature:
BLAST of FC932177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932177 ID=FC932177; Name=FC932177; organism=Citrus clementina; type=EST; length=730bpback to top |