FC932177
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21 Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = 2 Query: 458 FKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 FKVA+LGAAGGIGQ L+LL+KM+PLVS LHLYDV+N GV AD+SH +T + V F G ++L AL G+++V+IPAGV K G Sbjct: 47 FKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPG 129
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.536e-21 Identity = 50/83 (60.24%), Postives = 65/83 (78.31%), Query Frame = 2 Query: 458 FKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 FKVA+LGAAGGIGQ L+LL+KM+PLVS LHLYDV+N GV AD+SH +T + V F G ++L AL G+++V+IPAG+ K G Sbjct: 43 FKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGIPRKPG 125
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_CAEEL (Probable malate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=mdh-1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.650e-21 Identity = 54/105 (51.43%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 392 TFARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 T + A +S R + + KVA+LGAAGGIGQPL LL+K PLV+ L LYDV+N GVAADLSH ++ ++V TGP+EL +A++ +V+VIPAGV K G Sbjct: 7 TLVQAAANSGLRAVSVRHSSQAPKVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVNTPGVAADLSHIDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPG 111
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_CHLRE (Malate dehydrogenase, mitochondrial OS=Chlamydomonas reinhardtii PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19 Identity = 57/128 (44.53%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 323 VTSVICESDTSFLNKESCSALRSTFARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 + + + S +S + K + A R A S + R KVAVLGAAGGIGQPL++L+KM+ VS+L LYD+ GVAAD+SH NT +QV F + LA AL+G ++V+IPAGV K G Sbjct: 29 IVAAMASSTSSAMAKWAAQAARGFAAAAPSSGKGR-----------KVAVLGAAGGIGQPLSMLMKMNSQVSSLSLYDIAGTPGVAADVSHINTKAQVKGF-DKDGLAEALRGCDLVIIPAGVPRKPG 144
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_SCHMA (Malate dehydrogenase, mitochondrial (Fragment) OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18 Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 479 AAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 A+GGIG+PL+LL+K SPL+S L LYD+ +VKGVAADLSH T + V GP ELA L G NVV+IPAG+ K G Sbjct: 1 ASGGIGEPLSLLLKQSPLISQLALYDIAHVKGVAADLSHIETQAHVTAHLGPGELAECLTGANVVIIPAGLPRKPG 76
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_SCHPO (Malate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=MDH1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17 Identity = 45/85 (52.94%), Postives = 60/85 (70.59%), Query Frame = 2 Query: 455 SFKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEE-LASALKGVNVVVIPAGVQEKLG 706 +FKVAVLGA GGIGQPL++L+K++ VS L L+D+ GVAAD+ H NT S V+ + ++ L AL G +VV+IPAGV K G Sbjct: 28 AFKVAVLGAGGGIGQPLSMLLKLNDKVSELALFDIRGAPGVAADIGHINTTSNVVGYAPDDKGLEKALNGADVVIIPAGVPRKPG 112
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHM_YEAST (Malate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=MDH1 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.473e-16 Identity = 47/85 (55.29%), Postives = 59/85 (69.41%), Query Frame = 2 Query: 458 FKVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFT--GPEELASALKGVNVVVIPAGVQEKLG 706 +KV VLGA GGIGQPL+LL+K++ V+ L LYD+ KGVA DLSH T S V FT P+ L +ALK ++V+IPAGV K G Sbjct: 18 YKVTVLGAGGGIGQPLSLLLKLNHKVTDLRLYDLKGAKGVATDLSHIPTNSVVKGFTPEEPDGLNNALKDTDMVLIPAGVPRKPG 102
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDHP_YEAST (Malate dehydrogenase, peroxisomal OS=Saccharomyces cerevisiae GN=MDH3 PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15 Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 461 KVAVLGAAGGIGQPLALLIKMSPLVSALHLYDVMNVKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 KVA+LGA+GG+GQPL+LL+K+SP VS L LYD+ +G+ DLSH NT S + + + + + L VV+IPAGV K G Sbjct: 3 KVAILGASGGVGQPLSLLLKLSPYVSELALYDIRAAEGIGKDLSHINTNSSCVGY-DKDSIENTLSNAQVVLIPAGVPRKPG 83
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDH_IDILO (Malate dehydrogenase OS=Idiomarina loihiensis GN=mdh PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14 Identity = 50/84 (59.52%), Postives = 58/84 (69.05%), Query Frame = 2 Query: 461 KVAVLGAAGGIGQPLALLIKMS-PLVSALHLYDVMN-VKGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 KVAVLGAAGGIGQ L+LL+K P S L LYDV V GVA DLSH T +V F G ++LASAL G ++V+IPAGV K G Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSELSLYDVAPVVPGVAVDLSHIPTDVKVTGF-GKDDLASALVGSDIVLIPAGVPRKPG 84
BLAST of FC932177 vs. ExPASy Swiss-Prot
Match: MDH_ECOLU (Malate dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=mdh PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.336e-13 Identity = 48/84 (57.14%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 461 KVAVLGAAGGIGQPLALLIKMS-PLVSALHLYDVMNV-KGVAADLSHCNTPSQVLDFTGPEELASALKGVNVVVIPAGVQEKLG 706 KVAVLGAAGGIGQ LALL+K P S L LYD+ V GVA DLSH T ++ F+G E+ AL+G NVV+I AGV K G Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG-EDATPALEGANVVLISAGVARKPG 84 The following BLAST results are available for this feature:
BLAST of FC932177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932177 ID=FC932177; Name=FC932177; organism=Citrus clementina; type=EST; length=730bpback to top |