FC932178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BACAC (Tryptophan synthase alpha chain OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=trpA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25 Identity = 58/144 (40.28%), Postives = 81/144 (56.25%), Query Frame = 1 Query: 241 KQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETE---SLQKEAMKNKIELVLFT 663 + GK A IPY+ GD L E ++ LD G+ I+E+G+P+SDP+ADGP IQ A R+L G I L EV ++ P L TY NP+L G + F+ + G+ G++VPD+P EE + L +EA I LV T Sbjct: 11 ENGKKAFIPYVMGGDGGLEILKERIRFLDEAGASIVEIGIPFSDPVADGPTIQRAGKRALDSGVTVKGIFQALIEVRKEVQIPFVLMTYLNPVLAFGKERFIENCMEAGVDGIIVPDLPYEEQDIIAPLLREANIALIPLVTVT 154
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BACAA (Tryptophan synthase alpha chain OS=Bacillus anthracis (strain A0248) GN=trpA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25 Identity = 58/144 (40.28%), Postives = 81/144 (56.25%), Query Frame = 1 Query: 241 KQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETE---SLQKEAMKNKIELVLFT 663 + GK A IPY+ GD L E ++ LD G+ I+E+G+P+SDP+ADGP IQ A R+L G I L EV ++ P L TY NP+L G + F+ + G+ G++VPD+P EE + L +EA I LV T Sbjct: 11 ENGKKAFIPYVMGGDGGLEILKERIRFLDEAGASIVEIGIPFSDPVADGPTIQRAGKRALDSGVTVKGIFQALIEVRKEVQIPFVLMTYLNPVLAFGKERFIENCMEAGVDGIIVPDLPYEEQDIIAPLLREANIALIPLVTVT 154
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_ROSDO (Tryptophan synthase alpha chain OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=trpA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.152e-25 Identity = 57/134 (42.54%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 220 ETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESL 618 + F +L K GK A + Y+ AGD + T+ E +K L + G D+IELG+P++DP+ADGP IQ A R+L G L + + + PI + YYNPI RGVD F++ +D GI GL+V D+P EE L Sbjct: 6 DKFAQLAKDGKKAFVAYVMAGDPNYETSLEVVKGLPAAGVDVIELGLPFTDPMADGPTIQLAGQRALEAGMTLQKTLDLARAFRKDDQTTPIVMMGYYNPIYSRGVDRFLAEAKDAGIDGLIVVDLPPEEDSEL 139
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_PSEU2 (Tryptophan synthase alpha chain OS=Pseudomonas syringae pv. syringae (strain B728a) GN=trpA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.152e-25 Identity = 59/151 (39.07%), Postives = 89/151 (58.94%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT 663 L F +LK +G+ AL+ +ITAGD T+ + LK L + G+D+IELG+P++DP+ADG IQ A R+L G L M+ E V + PI L YYNPI + GV+ F++ ++ G+ GL++ D+P E L A + I+ + T Sbjct: 4 LEHRFAQLKTEGRAALVTFITAGDPGYDTSLKVLKGLPAAGADVIELGMPFTDPMADGVAIQLATLRALDAGQTLQKTLQMVSEFRVDDQTTPIVLMGYYNPIHRFGVEAFVAQAKEAGVDGLIIVDLPPEHDAELATPAQASGIDFIRLT 154
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_PSEAB (Tryptophan synthase alpha chain OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=trpA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.152e-25 Identity = 58/151 (38.41%), Postives = 92/151 (60.93%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQIS-CPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT 663 L F +LK++ + AL+ ++TAGD D +++ E LK L + G+D+IELG+P++DP+ADGP IQ A R+L G L M++E S P+ L Y+NPI GV+ F++ +++G+ GL+V D+P E E L A ++ + T Sbjct: 4 LQTRFAQLKQENRAALVTFVTAGDPDYASSLEILKGLPAAGADVIELGMPFTDPMADGPAIQLANIRALDGGQTLARTLQMVREFRSGDSETPLVLMGYFNPIHHYGVERFIAEAKEVGVDGLIVVDLPPEHNEDLCHPAQAAGLDFIRLT 154
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_OCHA4 (Tryptophan synthase alpha chain OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=trpA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.152e-25 Identity = 62/154 (40.26%), Postives = 86/154 (55.84%), Query Frame = 1 Query: 205 TVGLAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-ISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT 663 T + F LK +G+ AL+ Y GD DL T+ + +K L G+D+IELG+P+SDP+ADGP IQAA R+L G L M E + + PI + YYNPI GV+ F++ + G+ GL+V D+P E L AMK I + T Sbjct: 2 TTRIDTKFAELKAEGRPALVTYFMGGDPDLETSLKVMKALPKAGADVIELGMPFSDPMADGPAIQAAGLRALNAGQTLAKTLHMAAEFRKEDNTTPIVMMGYYNPIYIYGVERFLADAKASGVDGLIVVDLPSEMDAELCIPAMKAGINFIRLT 155
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BURP8 (Tryptophan synthase alpha chain OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=trpA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.152e-25 Identity = 61/142 (42.96%), Postives = 87/142 (61.27%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMK 636 + TF L QGK LIP++TAGD D + T E + L G+D+IELGVP+SDP+ADGPVIQ ++ R+LA+G + +L+ +K P+ L Y NPI + G D F + +D G+ G++V D P EE+ + E MK Sbjct: 4 IQSTFAALAAQGKKGLIPFMTAGDPDPARTVEFMHALAKGGADVIELGVPFSDPMADGPVIQQSSERALAKGVSLRHVLADVKRFRESDDKTPVVLMGYANPIERMGADAFAAAAKDAGVDGVLVVDYPPEESANF-AETMK 144
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BURA4 (Tryptophan synthase alpha chain OS=Burkholderia ambifaria (strain MC40-6) GN=trpA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.152e-25 Identity = 59/132 (44.70%), Postives = 85/132 (64.39%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE 606 + +TF L +QG+ LIP+ITAGD D + T E + L G+D+IELGVP+SDP+ADGPVIQ ++ R+LARG ++L+ +K + P+ L Y NPI + GVD F + + G+ G++V D P EE Sbjct: 4 IQQTFAALAEQGRKGLIPFITAGDPDPAKTVEFMHALAEGGADVIELGVPFSDPMADGPVIQRSSERALARGVTLKSVLADVKRFRDTNQTTPVVLMGYANPIERMGVDAFATEAQAAGVDGVLVVDYPPEE 135
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_RALPJ (Tryptophan synthase alpha chain OS=Ralstonia pickettii (strain 12J) GN=trpA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.423e-25 Identity = 58/138 (42.03%), Postives = 85/138 (61.59%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQK 624 +A+TF++L QG+ LIP+ITAGD T + + L GS++IELGVP+SDP+ADGPVIQ A+ R+LA+ +L ++ ++ P+ L Y NPI + GVD F + G+ G++V D P EE E+ K Sbjct: 4 IAQTFSQLSAQGRKGLIPFITAGDPYPEMTVDLMHALVKGGSNVIELGVPFSDPMADGPVIQRASERALAKKVGLRTVLEYVRAFRATDLTTPVVLMGYANPIERMGVDAFAKAASEAGVDGVLVVDYPPEECEAFAK 141
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_PSEPW (Tryptophan synthase alpha chain OS=Pseudomonas putida (strain W619) GN=trpA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.423e-25 Identity = 58/151 (38.41%), Postives = 89/151 (58.94%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT 663 L + F LK +G+ AL+ ++TAGD + + LK L + G+D+IELG+P++DP+ADG IQ A R+L G N L M++E V + PI L YYNPI + GV+ F++ ++ G+ GL++ D+P E L A I+ + T Sbjct: 4 LEQRFAELKAEGRSALVTFVTAGDPGYDASLQILKGLPAAGADVIELGMPFTDPMADGVAIQLATLRALEAGQNLAKTLQMVREFRVDNQATPIVLMGYYNPIHRFGVEKFVAEAKEAGVDGLIIVDLPPEHDAELATPAQAAGIDFIRLT 154 The following BLAST results are available for this feature:
BLAST of FC932178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932178 ID=FC932178; Name=FC932178; organism=Citrus clementina; type=EST; length=664bpback to top |