FC932178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_PHOLL (Tryptophan synthase alpha chain OS=Photorhabdus luminescens subsp. laumondii GN=trpA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.581e-16 Identity = 45/143 (31.47%), Postives = 76/143 (53.15%), Query Frame = 1 Query: 220 ETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQI-SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKI 645 + F +L+ + + A +P++T GD + + + L + G+D +EL +P+SDPLADGP IQ A R+ + +L ++ + PI L Y N + G+D F +D I ++V DVP+ E+ + AMK+ I Sbjct: 6 QLFKQLESRKQGAFVPFVTLGDPTPELSLKIIDALITGGADALELSIPFSDPLADGPTIQNANLRAFSSNVTPTLCFELLTKIRAKYPDIPIGLLMYANLVFHHGIDEFYRRCKDTDIDSVLVADVPMSESRPFRTAAMKHGI 148
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_PASMU (Tryptophan synthase alpha chain OS=Pasteurella multocida GN=trpA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.581e-16 Identity = 46/144 (31.94%), Postives = 83/144 (57.64%), Query Frame = 1 Query: 226 FTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQI-SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 F++L+++ + A +P++T D +L+ + E ++ L G+D +ELG P+SDP+ DGPVIQAA R+L G + +A +L +V + PI+L N + +G++ F ++G+ +++ D+PL A K I+ V Sbjct: 8 FSQLQQKQQGAFVPFVTLCDPNLAQSFEIIQTLVENGADALELGFPFSDPMLDGPVIQAANQRALVAGCSTDASFQLLTQVRSTYPTLPISLLLCANLVYAQGIERFYQRCAEVGVDAVLIADLPLFAHREFTVMAEKYSIQQV 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_CALS8 (Tryptophan synthase alpha chain OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=trpA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.581e-16 Identity = 46/143 (32.17%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 226 FTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 F LK +GK A I Y T G T + +KL+ S D++ELG P+SDP+ADG VIQ A+ ++L + + +++ + PIA+ Y N + KRG++ F +D G +++PD+ EE+ + +N + + Sbjct: 8 FEELKIKGKKAFIGYTTFGYPTKGETLDYIKLIYSY-VDVLELGFPFSDPIADGEVIQRASVKALKEDIKLDHLFYSIEKF--KKDKPIAIMLYANTVYKRGIEKFFKDCKDFGADAVIIPDISYEESAEFKAACRENGVHYI 147
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BUCSC (Tryptophan synthase alpha chain OS=Buchnera aphidicola subsp. Schlechtendalia chinensis GN=trpA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.581e-16 Identity = 47/136 (34.56%), Postives = 76/136 (55.88%), Query Frame = 1 Query: 250 KVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQI-SCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 K IP+I GD + + + + +L G+D +ELG P+SDPL+DG IQ A R+ + N ML+++ + + PI L Y N I K G++NF ++GI +++ D+P+EE+ +K A+ N I V Sbjct: 16 KGCFIPFIILGDPSIEMSLKIIDVLIENGADGLELGFPFSDPLSDGKTIQKAHLRAFSSKMNIYLCFEMLQKIRKKYNTIPIGLLLYANLIFKFGINNFYLKCFNVGIDSVLIADLPVEESNDFRKCAIANNISSV 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_VIBME (Tryptophan synthase alpha chain OS=Vibrio metschnikovii GN=trpA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16 Identity = 47/140 (33.57%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 226 FTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKI 645 F RL + A +P++T GD + + ++ L G+D +ELG+P+SDPLADGP IQ A + +L GT + + PI L Y N + RG+DNF + G+ +++ DVP E+ A K I Sbjct: 8 FQRLAAHNQGAFVPFVTIGDPNPQQSLRIMQTLVEAGADALELGIPFSDPLADGPTIQGAIS-ALDSGTKPIRCFEADQAPIRAQDIPIYLLMYANLVYARGIDNFYQRCQQAGVDSVLIADVPTNESAEFGPAAKKYAI 146
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_HAEIG (Tryptophan synthase alpha chain OS=Haemophilus influenzae (strain PittGG) GN=trpA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16 Identity = 51/146 (34.93%), Postives = 79/146 (54.11%), Query Frame = 1 Query: 226 FTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV---VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 F L + + A +P++T D + E + L G+D +ELG P+SDPL DGPVIQAA R+L G + +L++V P+I PI+L N I +G+D F ++G+ ++V D+PL E + A K+ I+ V Sbjct: 8 FATLNAKNEGAFVPFVTLCDPTFDRSFEIICTLVDNGADALELGFPFSDPLLDGPVIQAANNRALTAGHSSEDSFKLLEKVRSKYPEI--PISLLLCANLIFAKGLDAFYQRCAEVGVDAVLVADIPLLAKEDYVQAAKKHGIQPV 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_HAEIE (Tryptophan synthase alpha chain OS=Haemophilus influenzae (strain PittEE) GN=trpA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16 Identity = 51/146 (34.93%), Postives = 79/146 (54.11%), Query Frame = 1 Query: 226 FTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV---VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 F L + + A +P++T D + E + L G+D +ELG P+SDPL DGPVIQAA R+L G + +L++V P+I PI+L N I +G+D F ++G+ ++V D+PL E + A K+ I+ V Sbjct: 8 FATLNAKNEGAFVPFVTLCDPTFDRSFEIICTLVDNGADALELGFPFSDPLLDGPVIQAANNRALTAGHSSEDSFKLLEKVRSKYPEI--PISLLLCANLIFAKGLDAFYQRCAEVGVDAVLVADIPLLAKEDYVQAAKKHGIQPV 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_HAEI8 (Tryptophan synthase alpha chain OS=Haemophilus influenzae (strain 86-028NP) GN=trpA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16 Identity = 51/146 (34.93%), Postives = 79/146 (54.11%), Query Frame = 1 Query: 226 FTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV---VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 F L + + A +P++T D + E + L G+D +ELG P+SDPL DGPVIQAA R+L G + +L++V P+I PI+L N I +G+D F ++G+ ++V D+PL E + A K+ I+ V Sbjct: 8 FATLNAKNEGAFVPFVTLCDPTFDCSFEIICTLVDNGADALELGFPFSDPLLDGPVIQAANNRALTAGHSSEDSFKLLEKVRSKYPEI--PISLLLCANLIFAKGLDAFYQRCAEVGVDAVLVADIPLLAKEDYVQAAKKHGIQPV 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_DICTD (Tryptophan synthase alpha chain OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=trpA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16 Identity = 48/140 (34.29%), Postives = 77/140 (55.00%), Query Frame = 1 Query: 241 KQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLF 660 K + IP+ +G E L + DI+ELGVP+SDP+ADGPV+Q R++ RG N N+ L L + + L Y+N +++ ++ + +D I+GLV+PD+P+EE E+L K ++L+LF Sbjct: 11 KSKSLFFIPFFVSGFPSFDFL-EVFLLKNKDKIDILELGVPFSDPVADGPVLQEINYRAMVRGVNLNSTLDWLVRSGVSRNIDVILLLYFN-LIQNKLEENLKRFKDTEIKGLVIPDLPMEEAETLIPLFNKYNLDLILF 148
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_COREF (Tryptophan synthase alpha chain OS=Corynebacterium efficiens GN=trpA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16 Identity = 44/132 (33.33%), Postives = 74/132 (56.06%), Query Frame = 1 Query: 220 ETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFN---AILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE 606 + FTRL + G+ A +P+I D + + + G+D +ELGVP+SDP+ADGP + + R+L G+ + A+++ ++E P+I PI + Y N RG+D F + G +++PDVP+ E Sbjct: 6 DMFTRLDEAGEGAFVPFIMLNDPSPEDSFQIISTAIEAGADALELGVPFSDPVADGPTVAESHLRALDGGSTVDSCLALIARVREAYPEI--PIGMLIYGNVPFTRGLDKFYREFAEAGADSILLPDVPVRE 135 The following BLAST results are available for this feature:
BLAST of FC932178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932178 ID=FC932178; Name=FC932178; organism=Citrus clementina; type=EST; length=664bpback to top |