FC932178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_STRZP (Tryptophan synthase alpha chain OS=Streptococcus pneumoniae (strain P1031) GN=trpA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.905e-26 Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSD--LSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 L E +K GK +PYI AGD + L AE + L+ G IE+G+P+SDP+ADGPVI+ A RSLA GT+ A++ LK + +I P+ + TY+NP+ + GV+NF+ + D ++GL++PD+P E ++ I L+ Sbjct: 5 LTEKLNAIKAAGKGIFVPYIMAGDHEKGLDGLAETIHFLEDLGVSAIEVGIPFSDPVADGPVIEEAGLRSLAHGTSTQALVETLKTIETEI--PLVIMTYFNPLFQYGVENFVKDLADTAVKGLIIPDLPHEHANFVEPFLADTDIALI 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_STRPJ (Tryptophan synthase alpha chain OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=trpA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.905e-26 Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSD--LSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 L E +K GK +PYI AGD + L AE + L+ G IE+G+P+SDP+ADGPVI+ A RSLA GT+ A++ LK + +I P+ + TY+NP+ + GV+NF+ + D ++GL++PD+P E ++ I L+ Sbjct: 5 LTEKLNAIKAAGKGIFVPYIMAGDHEKGLDGLAETIHFLEDLGVSAIEVGIPFSDPVADGPVIEEAGLRSLAHGTSTQALVETLKTIETEI--PLVIMTYFNPLFQYGVENFVKDLADTAVKGLIIPDLPHEHANFVEPFLADTDIALI 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_STRPI (Tryptophan synthase alpha chain OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=trpA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.905e-26 Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSD--LSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 L E +K GK +PYI AGD + L AE + L+ G IE+G+P+SDP+ADGPVI+ A RSLA GT+ A++ LK + +I P+ + TY+NP+ + GV+NF+ + D ++GL++PD+P E ++ I L+ Sbjct: 5 LTEKLNAIKAAGKGIFVPYIMAGDHEKGLDGLAETIHFLEDLGVSAIEVGIPFSDPVADGPVIEEAGLRSLAHGTSTQALVETLKTIETEI--PLVIMTYFNPLFQYGVENFVKDLADTAVKGLIIPDLPHEHANFVEPFLADTDIALI 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_STRP4 (Tryptophan synthase alpha chain OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=trpA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.905e-26 Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSD--LSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 L E +K GK +PYI AGD + L AE + L+ G IE+G+P+SDP+ADGPVI+ A RSLA GT+ A++ LK + +I P+ + TY+NP+ + GV+NF+ + D ++GL++PD+P E ++ I L+ Sbjct: 5 LTEKLNAIKATGKGIFVPYIMAGDHEKGLDGLAETIHFLEDLGVSAIEVGIPFSDPVADGPVIEEAGLRSLAHGTSTQALVETLKTIETEI--PLVIMTYFNPLFQYGVENFVKDLADTAVKGLIIPDLPHEHANFVEPFLADTDIALI 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BACSK (Tryptophan synthase alpha chain OS=Bacillus clausii (strain KSM-K16) GN=trpA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.905e-26 Identity = 61/139 (43.88%), Postives = 89/139 (64.03%), Query Frame = 1 Query: 241 KQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-ISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 K+G + IP+ITAGD T L G+D++ELG+PYSDPLADGPVIQ A+ R+LA G ++++ E+ + ++ P+ +FTY NP+L+ G + F T D GI GL+VPD+P EE+E+L E K + L+ Sbjct: 10 KKGNL-FIPFITAGDPVREATIALALSLQRSGADVLELGIPYSDPLADGPVIQNASKRALAGGMTLAKAMALVPEMRKEGLTIPVIVFTYANPLLQFGFERFCETACDYGIDGLLVPDLPFEESETLANECEKQGLALI 147
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BACHD (Tryptophan synthase alpha chain OS=Bacillus halodurans GN=trpA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.405e-26 Identity = 58/136 (42.65%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 250 KVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-ISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 K IP+ITAGD + T E L+ G+DI+ELG+PYSDPLADGPVIQAA+ R+L LS++ ++ Q ++ P+ +FTY NP+L+ G + F+ D + G++VPD+P EE E LQ ++ + L+ Sbjct: 12 KNLFIPFITAGDPNPEVTIELALTLEEAGADILELGIPYSDPLADGPVIQAASKRALKHEMTLEKALSLVPKMRAQGLTIPVIVFTYVNPLLQYGEEQFVKRAADYQVDGILVPDMPFEEGEVLQAACQEHNLSLI 147
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_RHOSK (Tryptophan synthase alpha chain OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=trpA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.366e-26 Identity = 59/134 (44.03%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 220 ETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESL 618 +TF RL+ +GK A + YI AGD DL T+ ++ L G DIIELG+P++DP+ADGP IQ A R+L G L M++ PI + YYNPI RGV+ F++ + GI GL+V D+P EE L Sbjct: 6 DTFRRLRAEGKKAFVAYIMAGDPDLETSLAVMRGLPEAGVDIIELGMPFTDPMADGPTIQTAGQRALEGGQTLTRTLEMVRAFRAENAETPIVMMGYYNPIYARGVETFLAEATEAGIDGLIVVDLPPEEDAEL 139
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_RHOS4 (Tryptophan synthase alpha chain OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=trpA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.366e-26 Identity = 59/134 (44.03%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 220 ETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESL 618 +TF RL+ +GK A + YI AGD DL T+ ++ L G DIIELG+P++DP+ADGP IQ A R+L G L M++ PI + YYNPI RGV+ F++ + GI GL+V D+P EE L Sbjct: 6 DTFRRLRAEGKKAFVAYIMAGDPDLETSLAVMRGLPEAGVDIIELGMPFTDPMADGPTIQTAGQRALEGGQTLTRTLEMVRAFRAENAETPIVMMGYYNPIYARGVETFLAEATEAGIDGLIVVDLPPEEDAEL 139
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_RHOS1 (Tryptophan synthase alpha chain OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=trpA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.366e-26 Identity = 59/134 (44.03%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 220 ETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESL 618 +TF RL+ +GK A + YI AGD DL T+ ++ L G DIIELG+P++DP+ADGP IQ A R+L G L M++ PI + YYNPI RGV+ F++ + GI GL+V D+P EE L Sbjct: 6 DTFRRLRAEGKKAFVAYIMAGDPDLETSLAVMRGLPEAGVDIIELGMPFTDPMADGPTIQTAGQRALEGGQTLTRTLEMVRAFRAENAETPIVMMGYYNPIYARGVETFLAEATEAGIDGLIVVDLPPEEDAEL 139
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_PSEU5 (Tryptophan synthase alpha chain OS=Pseudomonas stutzeri (strain A1501) GN=trpA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.093e-25 Identity = 62/151 (41.06%), Postives = 91/151 (60.26%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT 663 L F LK+Q + AL+ +ITAGD D +T+ + LK L + G+D+IELG+P++DP+ADGP IQ A R+LA + L M++E + PI L Y+NPI K GV+ F++ + G+ GL+V D+P E E L A I+ + T Sbjct: 4 LLTRFDELKQQNRAALVTFITAGDPDYATSLQILKGLPAAGADVIELGMPFTDPMADGPAIQLANIRALAAKQDLAKTLQMVREFRQDDQTTPIVLMGYFNPIHKMGVERFIAEAVEAGVDGLIVVDLPPEHNEDLCDPAQAAGIDFIRLT 154 The following BLAST results are available for this feature:
BLAST of FC932178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932178 ID=FC932178; Name=FC932178; organism=Citrus clementina; type=EST; length=664bpback to top |