FC932178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_STRR6 (Tryptophan synthase alpha chain OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=trpA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.427e-25 Identity = 57/149 (38.26%), Postives = 88/149 (59.06%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSD--LSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 L E +K GK +PYI AGD + L E + L+ G IE+G+P+SDP+ADGPVI+ A RSLA GT+ A++ LK + +I P+ + TY+NP+ + GV+NF+ + D ++GL++PD+P E ++ I L+ Sbjct: 5 LTEKLNAIKATGKGIFVPYIMAGDHEKGLDGLGETIHFLEDLGVSAIEVGIPFSDPVADGPVIEEAGLRSLAHGTSTQALVETLKTIETEI--PLVIMTYFNPLFQYGVENFVKDLADTAVKGLIIPDLPHEHANFVEPFLADTDIALI 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_STRP2 (Tryptophan synthase alpha chain OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=trpA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.427e-25 Identity = 57/149 (38.26%), Postives = 88/149 (59.06%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSD--LSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 L E +K GK +PYI AGD + L E + L+ G IE+G+P+SDP+ADGPVI+ A RSLA GT+ A++ LK + +I P+ + TY+NP+ + GV+NF+ + D ++GL++PD+P E ++ I L+ Sbjct: 5 LTEKLNAIKATGKGIFVPYIMAGDHEKGLDGLGETIHFLEDLGVSAIEVGIPFSDPVADGPVIEEAGLRSLAHGTSTQALVETLKTIETEI--PLVIMTYFNPLFQYGVENFVKDLADTAVKGLIIPDLPHEHANFVEPFLADTDIALI 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BURS3 (Tryptophan synthase alpha chain OS=Burkholderia sp. (strain 383) GN=trpA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.427e-25 Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLK---EVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE 606 + +TF L +QG+ LIP+ITAGD D + T E + L G+D+IELGVP+SDP+ADGPVIQ ++ R+LARG ++L+ +K E P+ P+ L Y NPI + GVD F + + G+ G++V D P EE Sbjct: 4 IQQTFAALAEQGRKGLIPFITAGDPDPAKTVEFMHALAEGGADVIELGVPFSDPMADGPVIQRSSERALARGVTLKSVLADVKRFRETDPK--TPVVLMGYANPIERMGVDTFAAEAQAAGVDGVLVVDYPPEE 135
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BURM1 (Tryptophan synthase alpha chain OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=trpA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.427e-25 Identity = 60/132 (45.45%), Postives = 85/132 (64.39%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE 606 + +TF L +QG+ LIP+ITAGD D + T E + L + G+D+IELGVP+SDP+ADGPVIQ ++ R+LARG +L+ +K + P+ L Y NPI + GVD F + R G+ G++V D P EE Sbjct: 4 IQQTFAALAQQGRKGLIPFITAGDPDPAKTVEFMHALAAGGADVIELGVPFSDPMADGPVIQRSSERALARGVTLKHVLADVKRFRETNQTTPVVLMGYANPIERHGVDAFAADARAAGVDGVLVVDYPPEE 135
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_PSE14 (Tryptophan synthase alpha chain OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=trpA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25 Identity = 59/151 (39.07%), Postives = 90/151 (59.60%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT 663 L + F +LK +G+ AL+ +ITAGD T+ + LK L + G+D+IELG+P++DP+ADG IQ A R+L G L M+ E V + PI L YYNPI + GV+ F++ ++ G+ GL++ D+P E L A + I+ + T Sbjct: 4 LEQRFAQLKTEGRAALVTFITAGDPGYDTSLQVLKGLPAAGADVIELGMPFTDPMADGVAIQLATLRALDAGQTLQKTLQMVSEFRVDDQTTPIVLMGYYNPIHRFGVEAFVAQAKEAGVDGLIIVDLPPEHDAELATPAQASGIDFIRLT 154
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_SYNFM (Tryptophan synthase alpha chain OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=trpA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25 Identity = 56/145 (38.62%), Postives = 88/145 (60.69%), Query Frame = 1 Query: 220 ETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 E F +L+K+ + AL+ ++TAGD D + E ++ + G DI+ELG+P+SDP ADGPVIQ ++TR+L G N + M++E+ PI F+YYNPIL G F D G G+++ D+P EE++ L ++ + L+ Sbjct: 6 EKFEQLRKRNEKALVGFVTAGDPDPGRSLEIIRTMCRSGVDILELGIPFSDPTADGPVIQRSSTRALKAGMNLSKAFEMIRELRGTCDVPIVAFSYYNPILAYGGAKFYRDALDSGADGVLIVDLPPEESDELTRQWPDRDLALI 150
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_PSEAE (Tryptophan synthase alpha chain OS=Pseudomonas aeruginosa GN=trpA PE=3 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25 Identity = 59/151 (39.07%), Postives = 92/151 (60.93%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQIS-CPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT 663 L F +LK++ + AL+ ++TAGD D +++ E LK L + G+D+IELG+P++DP+ADGP IQ A R+L G L M++E S P+ L Y+NPI GV+ F++ +++G+ GL+V D+P E E L A I+ + T Sbjct: 4 LQTRFAQLKQENRAALVTFVTAGDPDYASSLEILKGLPAAGADVIELGMPFTDPMADGPAIQLANIRALDGGQTLARTLQMVREFRSGDSETPLVLMGYFNPIHHYGVERFIAEAKEVGVDGLIVVDLPPEHNEDLCHPAQAAGIDFIRLT 154
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BURCJ (Tryptophan synthase alpha chain OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=trpA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25 Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLK---EVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE 606 + +TF L +QG+ LIP+ITAGD D + T E + L + G+D+IELGVP+SDP+ADGPVIQ ++ R+LARG ++L+ +K E P+ P+ L Y NPI + GVD F + G+ G++V D P EE Sbjct: 4 IQQTFAALAEQGRKGLIPFITAGDPDPAKTVEFMHALAAGGADVIELGVPFSDPMADGPVIQRSSERALARGVTLKSVLADVKRFRETDPK--TPVVLMGYANPIERMGVDAFAAEAHAAGVDGVLVVDYPPEE 135
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BURCH (Tryptophan synthase alpha chain OS=Burkholderia cenocepacia (strain HI2424) GN=trpA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25 Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLK---EVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE 606 + +TF L +QG+ LIP+ITAGD D + T E + L + G+D+IELGVP+SDP+ADGPVIQ ++ R+LARG ++L+ +K E P+ P+ L Y NPI + GVD F + G+ G++V D P EE Sbjct: 4 IKQTFAALAEQGRKGLIPFITAGDPDPAKTVEFMHALAAGGADVIELGVPFSDPMADGPVIQRSSERALARGVTLKSVLADVKRFRETDPK--TPVVLMGYANPIERMGVDAFAAEAHAAGVDGVLVVDYPPEE 135
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BURCC (Tryptophan synthase alpha chain OS=Burkholderia cenocepacia (strain MC0-3) GN=trpA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25 Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLK---EVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE 606 + +TF L +QG+ LIP+ITAGD D + T E + L + G+D+IELGVP+SDP+ADGPVIQ ++ R+LARG ++L+ +K E P+ P+ L Y NPI + GVD F + G+ G++V D P EE Sbjct: 4 IKQTFAALAEQGRKGLIPFITAGDPDPAKTVEFMHALAAGGADVIELGVPFSDPMADGPVIQRSSERALARGVTLKSVLADVKRFRETDPK--TPVVLMGYANPIERMGVDAFAAEAHAAGVDGVLVVDYPPEE 135 The following BLAST results are available for this feature:
BLAST of FC932178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932178 ID=FC932178; Name=FC932178; organism=Citrus clementina; type=EST; length=664bpback to top |