FC932178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BURCA (Tryptophan synthase alpha chain OS=Burkholderia cenocepacia (strain AU 1054) GN=trpA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25 Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLK---EVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEE 606 + +TF L +QG+ LIP+ITAGD D + T E + L + G+D+IELGVP+SDP+ADGPVIQ ++ R+LARG ++L+ +K E P+ P+ L Y NPI + GVD F + G+ G++V D P EE Sbjct: 4 IKQTFAALAEQGRKGLIPFITAGDPDPAKTVEFMHALAAGGADVIELGVPFSDPMADGPVIQRSSERALARGVTLKSVLADVKRFRETDPK--TPVVLMGYANPIERMGVDAFAAEAHAAGVDGVLVVDYPPEE 135
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_SILPO (Tryptophan synthase alpha chain OS=Silicibacter pomeroyi GN=trpA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25 Identity = 60/132 (45.45%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 226 FTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESL 618 F LK QGK A + Y+ AGD D T+ E +K L G DIIELG+P++DP+ADGP IQ A R+L G L + E + PI + YYNPI RGVD F++ + GI GL+V D+P EE L Sbjct: 8 FAELKAQGKKAFVSYVMAGDPDFDTSLELVKGLPGAGVDIIELGLPFTDPMADGPTIQLAGQRALDGGMTLQRTLDLATEFRKTDNTTPIVMMGYYNPIYSRGVDRFLADAKAAGIDGLIVVDLPPEEDSEL 139
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_RHOP5 (Tryptophan synthase alpha chain OS=Rhodopseudomonas palustris (strain BisA53) GN=trpA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25 Identity = 59/151 (39.07%), Postives = 88/151 (58.28%), Query Frame = 1 Query: 205 TVGLAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 T L F LKKQG+ A + ++ AGD DL T+ + L+ L G+DIIE+G+P++DP+ADGP IQAA R+L GT L +++ + P+ L YYNPI GV+ F+ + G+ GL++ D+P EE L A+K + + Sbjct: 2 TTRLDSRFADLKKQGRAAFVTFLMAGDPDLDTSLKLLQALPKAGADIIEIGMPFTDPMADGPAIQAAGLRALKAGTTLQKTLELVRAFRKADDATPLVLMGYYNPIYIYGVEPFLIDAKAAGVDGLIIVDLPPEEDAELCLPAIKAGLNFI 152
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_PSEA8 (Tryptophan synthase alpha chain OS=Pseudomonas aeruginosa (strain LESB58) GN=trpA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25 Identity = 57/151 (37.75%), Postives = 92/151 (60.93%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT 663 L F +LK++ + AL+ ++TAGD D +++ E LK L + G+D+IELG+P++DP+ADGP IQ A R+L G L M++E + P+ L Y+NPI GV+ F++ +++G+ GL+V D+P E E L A ++ + T Sbjct: 4 LQTRFAQLKQENRAALVTFVTAGDPDYASSLEILKGLPAAGADVIELGMPFTDPMADGPAIQLANIRALDGGQTLARTLQMVREFRSGESETPLVLMGYFNPIHHYGVERFIAEAKEVGVDGLIVVDLPPEHNEDLCHPAQAAGLDFIRLT 154
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_NITWN (Tryptophan synthase alpha chain OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=trpA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25 Identity = 59/151 (39.07%), Postives = 86/151 (56.95%), Query Frame = 1 Query: 205 TVGLAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELV 654 T + F L+KQG+ A + ++ AGD D +T+ +K L G+DIIE+G+P++DP+ADGP +QAA R+L G L M+ E S P+ L YYNP+ GV+ F+ R G+ GL+V D+P EE L AMK + + Sbjct: 2 TTRIDTRFAELRKQGRSAFVTFLMAGDPDPATSLAIIKALPRAGADIIEIGMPFTDPMADGPAVQAAGRRALDAGMTLTGTLRMIGEFRKDDDSTPVVLMGYYNPVYIYGVEKFLDDARAAGVDGLIVVDLPPEEDSELCIPAMKAGLNFI 152
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_CHLAD (Tryptophan synthase alpha chain OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=trpA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25 Identity = 55/150 (36.67%), Postives = 92/150 (61.33%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARG-TNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLF 660 + ETF RL+ G++AL+PY+T G + +T E + L++ G+ + ELG+P+SDPLADG IQ A R+L G T + I ++ + + P+ L YYNP+L+ G++ + + G G ++PD+PLEE L+ A + ++L++F Sbjct: 4 ITETFARLRSSGRIALMPYLTVGFPERESTLELVPALEAAGASLFELGIPFSDPLADGATIQRATQRALENGVTIADCITTVAQLRARNVKAPLLLMGYYNPLLRYGLERACAELAAAGGDGWIIPDLPLEEAAELRPIAAAHHLDLIMF 153
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BACHK (Tryptophan synthase alpha chain OS=Bacillus thuringiensis subsp. konkukian GN=trpA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25 Identity = 58/144 (40.28%), Postives = 81/144 (56.25%), Query Frame = 1 Query: 241 KQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETE---SLQKEAMKNKIELVLFT 663 + GK A IPY+ GD L E ++ LD G+ I+E+G+P+SDP+ADGP IQ A R+L G I L EV ++ P L TY NP+L G + F+ + G+ G++VPD+P EE + L +EA I LV T Sbjct: 11 ENGKKAFIPYVMGGDGGLEILKERIRFLDEAGASIVEIGIPFSDPVADGPTIQRAGKRALDSGVTVKGIFQALIEVREEVQIPFVLMTYLNPVLAFGKERFIENCMEAGVDGIIVPDLPYEEQDIIAPLLREANIALIPLVTVT 154
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BACC3 (Tryptophan synthase alpha chain OS=Bacillus cereus (strain 03BB102) GN=trpA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25 Identity = 58/144 (40.28%), Postives = 81/144 (56.25%), Query Frame = 1 Query: 241 KQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETE---SLQKEAMKNKIELVLFT 663 + GK A IPY+ GD L E ++ LD G+ I+E+G+P+SDP+ADGP IQ A R+L G I L EV ++ P L TY NP+L G + F+ + G+ G++VPD+P EE + L +EA I LV T Sbjct: 11 ENGKKAFIPYVMGGDGGLEILKERIRFLDEAGASIVEIGIPFSDPVADGPTIQRAGKRALDSGVTVKGIFQALIEVRKEVQIPFVLMTYLNPVLAFGKERFIENCMEAGVDGIIVPDLPYEEQDIIAPLLREANIALIPLVTVT 154
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BACAN (Tryptophan synthase alpha chain OS=Bacillus anthracis GN=trpA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25 Identity = 58/144 (40.28%), Postives = 81/144 (56.25%), Query Frame = 1 Query: 241 KQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETE---SLQKEAMKNKIELVLFT 663 + GK A IPY+ GD L E ++ LD G+ I+E+G+P+SDP+ADGP IQ A R+L G I L EV ++ P L TY NP+L G + F+ + G+ G++VPD+P EE + L +EA I LV T Sbjct: 11 ENGKKAFIPYVMGGDGGLEILKERIRFLDEAGASIVEIGIPFSDPVADGPTIQRAGKRALDSGVTVKGIFQALIEVRKEVQIPFVLMTYLNPVLAFGKERFIENCMEAGVDGIIVPDLPYEEQDIIAPLLREANIALIPLVTVT 154
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_BACAH (Tryptophan synthase alpha chain OS=Bacillus thuringiensis (strain Al Hakam) GN=trpA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25 Identity = 58/144 (40.28%), Postives = 81/144 (56.25%), Query Frame = 1 Query: 241 KQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETE---SLQKEAMKNKIELVLFT 663 + GK A IPY+ GD L E ++ LD G+ I+E+G+P+SDP+ADGP IQ A R+L G I L EV ++ P L TY NP+L G + F+ + G+ G++VPD+P EE + L +EA I LV T Sbjct: 11 ENGKKAFIPYVMGGDGGLEILKERIRFLDEAGASIVEIGIPFSDPVADGPTIQRAGKRALDSGVTVKGIFQALIEVRKEVQIPFVLMTYLNPVLAFGKERFIENCMEAGVDGIIVPDLPYEEQDIIAPLLREANIALIPLVTVT 154 The following BLAST results are available for this feature:
BLAST of FC932178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932178 ID=FC932178; Name=FC932178; organism=Citrus clementina; type=EST; length=664bpback to top |