FC932187
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932187 vs. ExPASy Swiss-Prot
Match: EFTU_LEUCK (Elongation factor Tu OS=Leuconostoc citreum (strain KM20) GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 66/200 (33.00%), Postives = 101/200 (50.50%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMSKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 680 + K H+NI IGHVD GK+T T I K + E+ A + ++ +D E+ERGITI+ + ++ET + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK D + + + EV L + + + +P + + EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLAEKQGITATDFAE--------IDNAPEEKERGITINTSHIEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVEYLVVFLNKTDLVD---DEELVELVEMEVRELLSEYDFPGDDIPVIKGSALKALEGD 182
BLAST of FC932187 vs. ExPASy Swiss-Prot
Match: EFTU_GEOSL (Elongation factor Tu OS=Geobacter sulfurreducens GN=tuf1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 63/196 (32.14%), Postives = 94/196 (47.96%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMSKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEG 677 + K H+NI IGHVD GK+T T + K AE + F+ +D ERERGITI + ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L + + +P + S +G Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAIT---------------KVLAERGQAEFRGFDQIDNAPEERERGITIATSHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKADMVD---DEELLELVELEIRELLSSYDFPGDDIPIIKGSALKG 178
BLAST of FC932187 vs. ExPASy Swiss-Prot
Match: EFTU_FUSNN (Elongation factor Tu OS=Fusobacterium nucleatum subsp. nucleatum GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 63/189 (33.33%), Postives = 94/189 (49.74%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMSKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 656 + K H+NI IGHVD GK+TTT I + + SK F +D E+ERGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK D + + + EV L + G+ + +P + Sbjct: 8 RSKPHVNIGTIGHVDHGKTTTTA------------AISKVLSDKGWASKVDFDQ---IDAAPEEKERGITINTAHIEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLSRQVGVPYIVVYLNKSDMVE---DEELLELVEMEVRELLTEYGFPGDDIPVI 171
BLAST of FC932187 vs. ExPASy Swiss-Prot
Match: EFTU_EXISA (Elongation factor Tu OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 60/161 (37.27%), Postives = 85/161 (52.80%), Query Frame = 3 Query: 84 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMSKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 551 MGKEK H+N+ IGHVD GK+T T + L + +F++ +D ERERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LL+ +GV ++ NK+D Sbjct: 1 MGKEKFDRSKPHVNVGTIGHVDHGKTTLTAAISAVLSKAQGKAATKFDQ---------------IDGAPEERERGITIATAHIEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGPMP-------QTREHILLSRQVGVPYIVVFMNKVD 139
BLAST of FC932187 vs. ExPASy Swiss-Prot
Match: EFTU_DESAH (Elongation factor Tu OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 68/201 (33.83%), Postives = 94/201 (46.77%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMSKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDT 683 + K H+NI IGH+D GK+T T + K AA F +DK ERERGITI A ++ET K + +D PGH D+IKNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L K + + P V + E DT Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTAAIT---------------KHAALRGFGKFVAFDEIDKAPEERERGITISTAHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSADDGPMP-------QTREHILLARQVGVPSIVVFLNKCDMVD---DEELIELVEMELQELLTKYEFPGDDTPIVRGSALKALEADT 183
BLAST of FC932187 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPN (Elongation factor Tu OS=Chlamydia pneumoniae GN=tuf PE=3 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 62/181 (34.25%), Postives = 94/181 (51.93%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMSKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 632 + K HINI IGHVD GK+T T + L G SF+ +D E+ RGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + ++ D + E+S L++ GY Sbjct: 8 RNKPHINIGTIGHVDHGKTTLTAAITRALSGD---------------GLASFRDYSSIDNTPEEKARGITINASHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGAMP-------QTKEHILLARQVGVPYIVVFLNKVDMISQEDAEL-IDLVEMELSELLEEKGY 165
BLAST of FC932187 vs. ExPASy Swiss-Prot
Match: EFTU_BORGA (Elongation factor Tu OS=Borrelia garinii GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 58/175 (33.14%), Postives = 93/175 (53.14%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMSKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 614 + K H+N+ IGHVD GK+T T + ++K ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + E+++ V Y Sbjct: 8 RTKPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPELVELVEVEVLELVEKY 161
BLAST of FC932187 vs. ExPASy Swiss-Prot
Match: EFTU_BORBZ (Elongation factor Tu OS=Borrelia burgdorferi (strain ZS7) GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 58/175 (33.14%), Postives = 93/175 (53.14%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMSKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 614 + K H+N+ IGHVD GK+T T + ++K ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + E+++ V Y Sbjct: 8 RTKPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPELVELVEVEVLELVEKY 161
BLAST of FC932187 vs. ExPASy Swiss-Prot
Match: EFTU_BORBU (Elongation factor Tu OS=Borrelia burgdorferi GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 58/175 (33.14%), Postives = 93/175 (53.14%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMSKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 614 + K H+N+ IGHVD GK+T T + ++K ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + E+++ V Y Sbjct: 8 RTKPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPELVELVEVEVLELVEKY 161
BLAST of FC932187 vs. ExPASy Swiss-Prot
Match: EFTU_BORAP (Elongation factor Tu OS=Borrelia afzelii (strain PKo) GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 58/175 (33.14%), Postives = 93/175 (53.14%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMSKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 614 + K H+N+ IGHVD GK+T T + ++K ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + E+++ V Y Sbjct: 8 RTKPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPELVELVEVEVLELVEKY 161 The following BLAST results are available for this feature:
BLAST of FC932187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932187 ID=FC932187; Name=FC932187; organism=Citrus clementina; type=EST; length=707bpback to top |