FC932190

Overview
NameFC932190
Unique NameFC932190
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length682
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_TETPY (Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4)

HSP 1 Score: 141.354 bits (355), Expect = 4.334e-33
Identity = 69/136 (50.74%), Postives = 92/136 (67.65%), Query Frame = 3 
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL LMA+ MK    + +L +AFKV D+D  G +S ++LRH++T++GEKL   E DE IRE D+  DG I YE+F+  M+AK
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGHINYEEFVRMMMAK 149
[Close]
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_PNECA (Calmodulin OS=Pneumocystis carinii PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.334e-33
Identity = 68/136 (50.00%), Postives = 93/136 (68.38%), Query Frame = 3 
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELGI+MRSLG NPT+A+L+ +++E         DFP FL +MA+ MK    + ++R+AFKV DKD  G +S ++LRH++T++GEKL   E DE IRE DV  DG I Y +F+  M++K
Sbjct:   16 KEAFSLFDKDGDGSITTKELGIVMRSLGQNPTEAELQDMVNEVDADGNGTIDFPEFLAMMARKMKDVDSEEEIREAFKVFDKDGNGIISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGVIDYSEFVKMMLSK 151
[Close]
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_FAGSY (Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 5.660e-33
Identity = 71/136 (52.21%), Postives = 96/136 (70.59%), Query Frame = 3 
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL+LMA+ MK    + +L++AF+V DKD  GF+S ++LRH++T++GEKL   E DE IRE DV  DG+I YE+F+  M+AK
Sbjct:   14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDRDGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEVDEMIREADVDGDGQINYEEFVKVMMAK 148
[Close]
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_BLAEM (Calmodulin OS=Blastocladiella emersonii GN=CMD1 PE=3 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 5.660e-33
Identity = 67/136 (49.26%), Postives = 94/136 (69.12%), Query Frame = 3 
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L  +I+E         DFP FL +MA+ MK    + ++++AFKV DKD  G++S ++LRH++T++GEKL   E +E IRE DV  DG+I YE+F+  M++K
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELLVMINEVDADGNGTIDFPEFLTMMARKMKDSDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLSEDEVEEMIREADVDGDGQINYEEFVKMMMSK 149
[Close]
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_DICDI (Calmodulin OS=Dictyostelium discoideum GN=calA PE=1 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 7.393e-33
Identity = 65/136 (47.79%), Postives = 94/136 (69.12%), Query Frame = 3 
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL +MA+ M+    + ++R+AFKV DKD  G++S ++LRH++TS+GEKL   E DE IRE D+  DG++ Y++F+  M+ +
Sbjct:   16 KEAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGNIDFPEFLTMMARKMQDTDTEEEIREAFKVFDKDGNGYISAAELRHVMTSLGEKLTNEEVDEMIREADLDGDGQVNYDEFVKMMIVR 151
[Close]
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_PAXIN (Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 9.655e-33
Identity = 65/136 (47.79%), Postives = 95/136 (69.85%), Query Frame = 3 
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+ +L+ +I+E         DFP FL +MA+ M+    + ++++AFKV DKD  G++S ++LRH++T++GEKL  +E DE IRE DV  DG+I Y++F+  M++K
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEGELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDTEVDEMIREADVDGDGQINYDEFVKMMLSK 149
[Close]
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_PLAFA (Calmodulin OS=Plasmodium falciparum PE=3 SV=4)

HSP 1 Score: 139.813 bits (351), Expect = 1.261e-32
Identity = 67/136 (49.26%), Postives = 93/136 (68.38%), Query Frame = 3 
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL LMA+ +K    + +L +AF+V D+D  G++S  +LRH++T++GEKL   E DE IRE D+  DG+I YE+F+  M+AK
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMMIAK 149
[Close]
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_PLAF7 (Calmodulin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0323 PE=3 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.261e-32
Identity = 67/136 (49.26%), Postives = 93/136 (68.38%), Query Frame = 3 
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL LMA+ +K    + +L +AF+V D+D  G++S  +LRH++T++GEKL   E DE IRE D+  DG+I YE+F+  M+AK
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMMIAK 149
[Close]
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_ORYLA (Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.151e-32
Identity = 64/130 (49.23%), Postives = 91/130 (70.00%), Query Frame = 3 
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFI 389
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL +MA+ MK    + ++R+AF+V DKD  G++S ++LRH++T++GEKL   E DE IRE D+  DG++ YE+F+
Sbjct:    7 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 136
[Close]
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CALM_OREMO (Calmodulin OS=Oreochromis mossambicus GN=calm PE=2 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 2.151e-32
Identity = 65/136 (47.79%), Postives = 93/136 (68.38%), Query Frame = 3 
Query:    6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVAK 407
            KEAF+LFD DG G I   ELG +MRSLG NPT+A+L+ +I+E         DFP FL +MA+ MK    + ++R+AF+V DKD  G++S ++LR+++T++GEKL     DE IRE D+  DG++ YE+F+  M AK
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRYVMTNLGEKLTDEXVDEMIREADIDGDGQVNYEEFVQMMTAK 149
The following BLAST results are available for this feature:
BLAST of FC932190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
CALM_TETPY4.334e-3350.74Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4[more]
CALM_PNECA4.334e-3350.00Calmodulin OS=Pneumocystis carinii PE=3 SV=1[more]
CALM_FAGSY5.660e-3352.21Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3[more]
CALM_BLAEM5.660e-3349.26Calmodulin OS=Blastocladiella emersonii GN=CMD1 PE... [more]
CALM_DICDI7.393e-3347.79Calmodulin OS=Dictyostelium discoideum GN=calA PE=... [more]
CALM_PAXIN9.655e-3347.79Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3[more]
CALM_PLAFA1.261e-3249.26Calmodulin OS=Plasmodium falciparum PE=3 SV=4[more]
CALM_PLAF71.261e-3249.26Calmodulin OS=Plasmodium falciparum (isolate 3D7) ... [more]
CALM_ORYLA2.151e-3249.23Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm... [more]
CALM_OREMO2.151e-3247.79Calmodulin OS=Oreochromis mossambicus GN=calm PE=2... [more]

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Properties
Property NameValue
Genbank descriptionC34205F01EF PostHarveN Citrus clementina cDNA clone C34205F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932190 ID=FC932190; Name=FC932190; organism=Citrus clementina; type=EST; length=682bp
GCATGAAGGAAGCCTTCACATTGTTCGACACAGACGGTGGCGGAAAGATC
GCGCCGTCTGAGCTAGGGATCCTAATGAGGTCACTTGGGGGAAACCCGAC
CCAGGCCCAGCTCAAATCCATAATCTCCGAGGAAAAACTAACGGCACCCT
TTGACTTCCCGCGGTTCCTTGACCTGATGGCCAAGCACATGAAACCTGAG
CCCTTCGATCGCCAGTTGCGTGACGCCTTCAAAGTGCTGGATAAAGATAA
CACCGGCTTCGTCTCCGTCTCCGATCTACGACACATTCTCACTTCTATTG
GGGAGAAGCTGGAGCCTTCCGAGTTTGATGAGTGGATCCGGGAAGTGGAT
GTCGGGTCCGACGGCAAGATCAAGTACGAGGATTTTATTGCCCGGATGGT
GGCCAAGTGACCTGTGATTGGATCTTCAACTTTAAGATATGATTAATGGG
TGTCTGTTTATTTTTAATGTTTTCTGCAATTAATGTTGAGTTTTGTGTAC
CTTTCTGTTTTAATGTGATGGATTTTGATGGTATTTCTTGAATTGTTGAA
AGTAATGCTGACCTTTTGTTAGGTATTTTTTTACATTCTGAACTTTGATG
TTATGTGTAATATATAATGTGTAGATGTTTCTTGAAATGAATTGGTTTAT
TAATGACAAANAAAAAAAAAAAAAAAAAAAAA
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