FC932190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: MRLCA_RAT (Myosin regulatory light chain RLC-A OS=Rattus norvegicus GN=Rlc-a PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 37/127 (29.13%), Postives = 64/127 (50.39%), Query Frame = 3 Query: 6 KEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDF 386 KEAF + D + G I +L ++ S+G NPT L ++++E P +F FL + + + + +R+AF D++ G + LR +LT++G++ E DE RE + G Y +F Sbjct: 35 KEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLDAMMNE--APGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEAIGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEF 159
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: MYL4_HUMAN (Myosin light chain 4 OS=Homo sapiens GN=MYL4 PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 43/141 (30.50%), Postives = 76/141 (53.90%), Query Frame = 3 Query: 6 KEAFTLFDTDGGG--KIAPSELGILMRSLGGNPTQAQLKSIIS----EEKLTAPFDFPRFLDLMA--KHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARMVA 404 KEAF+LFD G KI + G ++R+LG NPT A++ ++ EE DF FL ++ K + + +V DK++ G V ++LRH+L ++GEK+ +E ++ + + ++G I YE F+ +++ Sbjct: 57 KEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQE-DANGCINYEAFVKHIMS 196
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CML10_ORYSJ (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica GN=CML10 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 44/135 (32.59%), Postives = 62/135 (45.93%), Query Frame = 3 Query: 3 MKEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKLTAP--FDFPRFLDLMAKHM-KPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARM 398 M+ F FD +G G+I+ SELG L SLG T +L +++E F L A + LR AF+V D D G +S ++L +L +GEK + I VD DG I +E+F M Sbjct: 41 MERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFAALNATASGDAAAVEEDLRHAFRVFDADGNGTISAAELARVLHGLGEKATVQQCRRMIEGVDQNGDGLISFEEFKVMM 175
BLAST of FC932190 vs. ExPASy Swiss-Prot
Match: CDPK2_ORYSJ (Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 44/134 (32.84%), Postives = 66/134 (49.25%), Query Frame = 3 Query: 3 MKEAFTLFDTDGGGKIAPSELGILMRSLGGNPTQAQLKSIISEEKL--TAPFDFPRFLDLMAKHMKPEPFDRQLRDAFKVLDKDNTGFVSVSDLRHILTSIGEKLEPSEFDEWIREVDVGSDGKIKYEDFIARM 398 +K+ FT DTD G I EL + LG ++A++K ++ + D+ F+ K E D L AF+ DKDN+GF++ +L L E + S + I EVD +DG+I YE+F A M Sbjct: 390 LKQMFTNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLER-DEHLFKAFQYFDKDNSGFITRDELESALIE-HEMGDTSTIKDIISEVDTDNDGRINYEEFCAMM 521 The following BLAST results are available for this feature:
BLAST of FC932190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932190 ID=FC932190; Name=FC932190; organism=Citrus clementina; type=EST; length=682bpback to top |