FC932199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC1_BRAJA (Fumarate hydratase class II 1 OS=Bradyrhizobium japonicum GN=fumC1 PE=3 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 2.810e-34 Identity = 69/111 (62.16%), Postives = 89/111 (80.18%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 S GHFELNV+KP++A +LHS+RL+ DA+ SF ++CV GI+A+ +RIS+L+ SLMLVT+L PKIGYDNAA VAK AH GTTLK+ AL+LG + ++EFD LV PEKM P Sbjct: 362 SQGHFELNVYKPVLAYNMLHSIRLMADAARSFTEHCVSGIRADEKRISELMQRSLMLVTALAPKIGYDNAAKVAKTAHANGTTLKEEALRLGFVTADEFDRLVQPEKMTKP 472
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_METEA (Fumarate hydratase class II OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=fumC PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 8.176e-34 Identity = 70/112 (62.50%), Postives = 86/112 (76.79%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 337 S GHFELNVFKP+IA+ +L S+R+L DAS SF NCV GI+AN +RIS L+ SLMLVT+L P IGYD AA +AK AHK GTTLK+ AL+LG + EEF+ +V PE M+ PS Sbjct: 359 SQGHFELNVFKPVIANAVLQSVRILADASVSFTDNCVVGIKANTDRISDLMSRSLMLVTALAPSIGYDKAAEIAKTAHKNGTTLKEEALRLGYVTDEEFERVVRPETMLAPS 470
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMH_CAEEL (Probable fumarate hydratase, mitochondrial OS=Caenorhabditis elegans GN=fum-1 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.395e-33 Identity = 68/111 (61.26%), Postives = 84/111 (75.68%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 SNGHFELNVFKP+I +L S RLL D++ SF +CV GI AN++ I+K++ ESLMLVT+LNP IGYDNAA +AK AHK GTTL A+KLG+L E+F V PE M+GP Sbjct: 390 SNGHFELNVFKPLIVRNVLQSTRLLADSAVSFTDHCVDGIVANKDNIAKIMRESLMLVTALNPHIGYDNAAKIAKTAHKNGTTLVQEAVKLGILTEEQFAQWVKPENMLGP 500
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_LEPIN (Fumarate hydratase class II OS=Leptospira interrogans GN=fumC PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.107e-33 Identity = 66/112 (58.93%), Postives = 92/112 (82.14%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 337 ++G+FELNVFKP+I +L+S+RLL D+ SF ++C RGI N+E++++ L+ SLMLVT+LNP IGYDNAA +AK AHK+GTTLK++ ++LG+L SE+FD V+PEKMI PS Sbjct: 351 ASGNFELNVFKPLIIHNVLNSIRLLSDSCVSFEEHCARGIIPNKEKLNEHLNNSLMLVTALNPHIGYDNAAKIAKNAHKKGTTLKESGIELGLLTSEQFDQWVLPEKMIHPS 462
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_LEPIC (Fumarate hydratase class II OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=fumC PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.107e-33 Identity = 66/112 (58.93%), Postives = 92/112 (82.14%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 337 ++G+FELNVFKP+I +L+S+RLL D+ SF ++C RGI N+E++++ L+ SLMLVT+LNP IGYDNAA +AK AHK+GTTLK++ ++LG+L SE+FD V+PEKMI PS Sbjct: 351 ASGNFELNVFKPLIIHNVLNSIRLLSDSCVSFEEHCARGIIPNKEKLNEHLNNSLMLVTALNPHIGYDNAAKIAKNAHKKGTTLKESGIELGLLTSEQFDQWVLPEKMIHPS 462
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMH_YEAST (Fumarate hydratase, mitochondrial OS=Saccharomyces cerevisiae GN=FUM1 PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 5.299e-33 Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 S G FELNVFKP++ + LL+S+RL+ DA+ SF +CV GI+AN RI +LL +SLMLVT+LNPKIGYD A+ VAK AHK+G TLK++AL+LGVL +EFD VVPE M+GP Sbjct: 377 SQGQFELNVFKPVMIANLLNSIRLITDAAYSFRVHCVEGIKANEPRIHELLTKSLMLVTALNPKIGYDAASKVAKNAHKKGITLKESALELGVLTEKEFDEWVVPEHMLGP 487
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_RICFE (Fumarate hydratase class II OS=Rickettsia felis GN=fumC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.299e-33 Identity = 69/110 (62.73%), Postives = 86/110 (78.18%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 331 SNGH ELNVFKP+I +L S+ LL D+ SFV +CV+G++ N RI+ L +SLMLVT+LNP IGYDNAA +AK+AHK G TLK+AA KL +L+ EEFD +VVPEKMIG Sbjct: 352 SNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIARINDLRDKSLMLVTALNPHIGYDNAAKIAKEAHKHGITLKEAAKKLNLLSEEEFDKIVVPEKMIG 461
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_HELPY (Fumarate hydratase class II OS=Helicobacter pylori GN=fumC PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.014e-32 Identity = 67/111 (60.36%), Postives = 86/111 (77.48%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 S G+FELNVFKP+I L SLRLL D+ SF +C GI+ NRE+I LH SLMLVT+LNP +GY+NAA +AK AHK+G +LK++AL+L +L++E+FD VVPEKMIGP Sbjct: 351 SQGNFELNVFKPVIIYNFLQSLRLLSDSMESFNIHCASGIEPNREKIDYYLHHSLMLVTALNPHVGYENAAKIAKNAHKKGISLKESALELKLLSAEDFDKFVVPEKMIGP 461
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_HELPJ (Fumarate hydratase class II OS=Helicobacter pylori J99 GN=fumC PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 4.486e-32 Identity = 66/111 (59.46%), Postives = 86/111 (77.48%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 S G+FELNVFKP+I L SLRLL D+ SF +C GI+ N+E+I LH SLMLVT+LNP +GY+NAA +AK AHK+G +LK++AL+L +L++E+FD VVPEKMIGP Sbjct: 351 SQGNFELNVFKPVIIYNFLQSLRLLSDSMESFNIHCASGIEPNKEKIDYYLHHSLMLVTALNPHVGYENAAKIAKNAHKKGISLKESALELKLLSAEDFDQFVVPEKMIGP 461
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_RALSO (Fumarate hydratase class II OS=Ralstonia solanacearum GN=fumC PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 7.652e-32 Identity = 66/110 (60.00%), Postives = 86/110 (78.18%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 331 ++G+FELNVF+PMIA LHS RLL D SF +C GI+ NRERI++L+ SLMLVT+LNP IGYD +A +AKKAHKEGT+L++AAL LG + +E+FD V PE+M+G Sbjct: 351 ASGNFELNVFRPMIAYNFLHSARLLADGMRSFNDHCAVGIEPNRERIAELVQRSLMLVTALNPHIGYDKSAQIAKKAHKEGTSLREAALALGYVTAEQFDAWVRPEQMVG 460 The following BLAST results are available for this feature:
BLAST of FC932199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932199 ID=FC932199; Name=FC932199; organism=Citrus clementina; type=EST; length=512bpback to top |