FC932199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_XYLFT (Fumarate hydratase class II OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=fumC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.094e-13 Identity = 39/104 (37.50%), Postives = 63/104 (60.58%), Query Frame = 2 Query: 5 NGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVP 316 +G+F+LNV P+IA LL S LLG+ + G++ ++R+ ++L + +LVT+LNP IGY+ AA +AK+A+KE + + A + LN E L+ P Sbjct: 354 SGNFQLNVTLPLIAYNLLESATLLGNVVMLLADKVIVGLKVRQDRVQEVLERNPILVTALNPIIGYEKAAVIAKRAYKEHRPVLEVACEESNLNPVELARLLDP 457
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_XYLFA (Fumarate hydratase class II OS=Xylella fastidiosa GN=fumC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.094e-13 Identity = 39/104 (37.50%), Postives = 63/104 (60.58%), Query Frame = 2 Query: 5 NGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVP 316 +G+F+LNV P+IA LL S LLG+ + G++ ++R+ ++L + +LVT+LNP IGY+ AA +AK+A+KE + + A + LN E L+ P Sbjct: 354 SGNFQLNVTLPLIAYNLLESATLLGNVVMLLADKVIVGLKVRQDRVQEVLERNPILVTALNPIIGYEKAAVIAKRAYKEHRPVLEVACEESNLNPVELARLLDP 457
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: ASPA_SERMA (Aspartate ammonia-lyase OS=Serratia marcescens GN=aspA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.772e-12 Identity = 34/110 (30.91%), Postives = 62/110 (56.36%), Query Frame = 2 Query: 8 GHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 337 G +LNV +P+I + S+ +L +A + ++ C+ GI AN+E + S+ +VT LNP IG+ N V K + G ++++ L+ G+L E D++ E ++ P+ Sbjct: 357 GQLQLNVMEPVIGQAMFESIHILTNACYNLLEKCINGITANKEVCEHYVFNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTEAELDDIFSVENLMHPA 466
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: ASPA_SHIFL (Aspartate ammonia-lyase OS=Shigella flexneri GN=aspA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.023e-12 Identity = 33/110 (30.00%), Postives = 63/110 (57.27%), Query Frame = 2 Query: 8 GHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 337 G +LNV +P+I + S+ +L +A + ++ C+ GI AN+E ++ S+ +VT LNP IG+ N V K + G ++++ L+ G+L E D++ + ++ P+ Sbjct: 357 GQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCINGITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTEAELDDIFSVQNLMHPA 466
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: ASPA_ECOLI (Aspartate ammonia-lyase OS=Escherichia coli (strain K12) GN=aspA PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.023e-12 Identity = 33/110 (30.00%), Postives = 63/110 (57.27%), Query Frame = 2 Query: 8 GHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 337 G +LNV +P+I + S+ +L +A + ++ C+ GI AN+E ++ S+ +VT LNP IG+ N V K + G ++++ L+ G+L E D++ + ++ P+ Sbjct: 357 GQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCINGITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTEAELDDIFSVQNLMHPA 466
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: ASPA_ECOL6 (Aspartate ammonia-lyase OS=Escherichia coli O6 GN=aspA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.023e-12 Identity = 33/110 (30.00%), Postives = 63/110 (57.27%), Query Frame = 2 Query: 8 GHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 337 G +LNV +P+I + S+ +L +A + ++ C+ GI AN+E ++ S+ +VT LNP IG+ N V K + G ++++ L+ G+L E D++ + ++ P+ Sbjct: 357 GQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCINGITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTEAELDDIFSVQNLMHPA 466
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: ASPA_ECO57 (Aspartate ammonia-lyase OS=Escherichia coli O157:H7 GN=aspA PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 3.023e-12 Identity = 33/110 (30.00%), Postives = 63/110 (57.27%), Query Frame = 2 Query: 8 GHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 337 G +LNV +P+I + S+ +L +A + ++ C+ GI AN+E ++ S+ +VT LNP IG+ N V K + G ++++ L+ G+L E D++ + ++ P+ Sbjct: 357 GQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCINGITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTEAELDDIFSVQNLMHPA 466
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_STRAW (Fumarate hydratase class II OS=Streptomyces avermitilis GN=fumC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.948e-12 Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 8 GHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLN 286 G+FELNV P+IA +L S+RLL S V GI A+R+R + S +VT LN IGY+ AA VAKKA E T++ L+ G ++ Sbjct: 354 GNFELNVMLPVIAKNVLESVRLLAHVSRLLADRTVDGIVAHRDRAREYAESSPSVVTPLNKYIGYEEAAKVAKKALAERQTIRQVVLESGYVD 446
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: ASPA_HAEIN (Aspartate ammonia-lyase OS=Haemophilus influenzae GN=aspA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.796e-12 Identity = 34/110 (30.91%), Postives = 60/110 (54.55%), Query Frame = 2 Query: 8 GHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 337 G +LNV +P+I + S+ +L +A + CV GI N+E + S+ +VT LNP IG+ N V K + G +++ L+ G+L E+ D+++ E ++ P+ Sbjct: 359 GQLQLNVMEPVIGQAMFESIDILTNACVNLRDKCVDGITVNKEICENYVFNSIGIVTYLNPFIGHHNGDLVGKICAQTGKGVREVVLEKGLLTEEQLDDILSVENLMNPT 468
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_STRCO (Fumarate hydratase class II OS=Streptomyces coelicolor GN=fumC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.343e-11 Identity = 43/114 (37.72%), Postives = 60/114 (52.63%), Query Frame = 2 Query: 8 GHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAAL-----KLGVLNSEEFDNLVVPEKMIGP 334 G+FELNV P+IA +L S+RLL + S V GI A+ ER + S +VT LN +GY+ AA VAK+A E T++ L + G L E+ D + +M P Sbjct: 348 GNFELNVMLPVIAKNVLESVRLLANVSRLLADRTVDGIVAHPERAREYAESSPSVVTPLNKYLGYEEAAKVAKRALAERKTIRQTVLEGGYVERGDLTREQLDQALDVLRMTRP 461 The following BLAST results are available for this feature:
BLAST of FC932199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932199 ID=FC932199; Name=FC932199; organism=Citrus clementina; type=EST; length=512bpback to top |