FC932199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_STAEQ (Fumarate hydratase class II OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fumC PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 9.680e-27 Identity = 58/111 (52.25%), Postives = 77/111 (69.37%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 S G+FELNVFKP+I L S+ LL D +F KNC GIQ E I+ L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + +F+ + PE M+ P Sbjct: 350 SQGNFELNVFKPVIMHNTLQSIYLLADGMNTFNKNCAIGIQPIEENINNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIESGYVTESQFEEWIKPEDMVDP 460
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_STAHJ (Fumarate hydratase class II OS=Staphylococcus haemolyticus (strain JCSC1435) GN=fumC PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 3.678e-26 Identity = 57/111 (51.35%), Postives = 77/111 (69.37%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 S G+FELNVFKP+I L S+ LL D +F NC GI+ E I+ L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + E+F+ + PE M+ P Sbjct: 350 SQGNFELNVFKPVILHNTLQSIYLLADGMQTFNDNCAVGIEPIEENINNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQSGHVTEEQFEEWIKPEDMVDP 460
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_PSESM (Fumarate hydratase class II OS=Pseudomonas syringae pv. tomato GN=fumC-1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 3.678e-26 Identity = 56/109 (51.38%), Postives = 80/109 (73.39%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 328 S GH +LNV+KP+I +L S+RLL D ++F ++CV G++ + E++++ L LMLVT+LNP IGYD +A +AKKA+ EG TL++AAL LG L EEFD V P+KM+ Sbjct: 350 SQGHLQLNVYKPVIIHNVLQSIRLLADGCSNFNEHCVAGMEPDAEKMAEHLERGLMLVTALNPHIGYDKSAHIAKKAYTEGLTLREAALALGYLTDEEFDAWVRPDKML 458
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_NITEU (Fumarate hydratase class II OS=Nitrosomonas europaea GN=fumC PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 4.804e-26 Identity = 60/106 (56.60%), Postives = 74/106 (69.81%), Query Frame = 2 Query: 8 GHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 325 G+FELN KP+I L S RLL D + SF +C GI AN RI + L ESLMLVT+LNP IGYD AA +AKKAH E TLK+AA++LG + +E+FD V P+KM Sbjct: 354 GNFELNTMKPLIIHNFLQSTRLLADGAESFNTHCAAGITANTVRIKQHLQESLMLVTALNPHIGYDKAAEIAKKAHHEMLTLKEAAIRLGYVTAEQFDVWVDPQKM 459
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_STAAW (Fumarate hydratase class II OS=Staphylococcus aureus (strain MW2) GN=fumC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.275e-26 Identity = 56/111 (50.45%), Postives = 76/111 (68.47%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 S G+FELNV+KP+I L S+ LL D +F NC GI+ E I L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + E+F+ + PE M+ P Sbjct: 350 SQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDP 460
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_STAAS (Fumarate hydratase class II OS=Staphylococcus aureus (strain MSSA476) GN=fumC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.275e-26 Identity = 56/111 (50.45%), Postives = 76/111 (68.47%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 S G+FELNV+KP+I L S+ LL D +F NC GI+ E I L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + E+F+ + PE M+ P Sbjct: 350 SQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDP 460
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_STAAR (Fumarate hydratase class II OS=Staphylococcus aureus (strain MRSA252) GN=fumC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.275e-26 Identity = 56/111 (50.45%), Postives = 76/111 (68.47%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 S G+FELNV+KP+I L S+ LL D +F NC GI+ E I L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + E+F+ + PE M+ P Sbjct: 350 SQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDP 460
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_STAAN (Fumarate hydratase class II OS=Staphylococcus aureus (strain N315) GN=fumC PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.275e-26 Identity = 56/111 (50.45%), Postives = 76/111 (68.47%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 S G+FELNV+KP+I L S+ LL D +F NC GI+ E I L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + E+F+ + PE M+ P Sbjct: 350 SQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDP 460
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_STAAM (Fumarate hydratase class II OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fumC PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.275e-26 Identity = 56/111 (50.45%), Postives = 76/111 (68.47%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 S G+FELNV+KP+I L S+ LL D +F NC GI+ E I L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + E+F+ + PE M+ P Sbjct: 350 SQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDP 460
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_STAAC (Fumarate hydratase class II OS=Staphylococcus aureus (strain COL) GN=fumC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.275e-26 Identity = 56/111 (50.45%), Postives = 76/111 (68.47%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 S G+FELNV+KP+I L S+ LL D +F NC GI+ E I L++SLMLVT+LNP IGY+ AA +AKKAHKEG TLK++A++ G + E+F+ + PE M+ P Sbjct: 350 SQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDP 460 The following BLAST results are available for this feature:
BLAST of FC932199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932199 ID=FC932199; Name=FC932199; organism=Citrus clementina; type=EST; length=512bpback to top |