FC932199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_LISIN (Fumarate hydratase class II OS=Listeria innocua GN=fumC PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.108e-22 Identity = 54/108 (50.00%), Postives = 73/108 (67.59%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 325 S G+FELNV+KP+I L S+ LL D+ SF +C+ G+ AN I +++SLMLVT+LNP IGY+ AA +AK A E TTLK+AA+K G + +EFD + P KM Sbjct: 345 SQGNFELNVYKPVIIFNFLESITLLSDSMRSFRIHCLEGLTANESVIEAKVNDSLMLVTALNPHIGYEKAAKIAKLAFDENTTLKEAAIKTGFVTEKEFDLWIDPLKM 452
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_CHLPN (Fumarate hydratase class II OS=Chlamydia pneumoniae GN=fumC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.728e-21 Identity = 51/110 (46.36%), Postives = 72/110 (65.45%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 331 S G+FELNV KP+I L S+ LL + +F + V+G++ N+ R+ ++ SLMLVT+L P +GYD + A KA E +LK+A L LG L+ +EFD LVVPE M+G Sbjct: 349 SRGNFELNVMKPVIIYNFLQSVDLLSEGMRAFSEFFVKGLKVNKARLQDNINNSLMLVTALAPVLGYDKCSKAALKAFHESISLKEACLALGYLSEKEFDRLVVPENMVG 458
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_CHLCV (Fumarate hydratase class II OS=Chlamydophila caviae GN=fumC PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.563e-21 Identity = 49/110 (44.55%), Postives = 71/110 (64.55%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 331 S G+FELNV KP+I L S+ +L +F V G++ N+ R+ + L SLMLVT+L P +GYD + +A KA + LK+A +++G L++EEFD LVVPE M+G Sbjct: 349 SRGNFELNVMKPVIIYNFLQSVDILAGGMQAFADYFVSGLRVNKPRLKEYLDNSLMLVTALTPVLGYDKCSKMALKAFHDNINLKEACIQMGYLSAEEFDRLVVPESMVG 458
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_PROMA (Fumarate hydratase class II OS=Prochlorococcus marinus GN=fumC PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.768e-20 Identity = 50/110 (45.45%), Postives = 70/110 (63.64%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 331 S GH ++N +KP+IA LL S+ LL A S + GI+ N E+I L SLML+TSL P IGY+ A+ +A+ AH++ TLK+A LG LN ++FD +V P+ M G Sbjct: 353 SGGHLQMNSYKPLIAFNLLESIDLLSSACKSSRILMIEGIEPNLEKIQNSLQNSLMLITSLTPIIGYEKASKIAQCAHEKDITLKEATKLLGYLNEDDFDRIVNPQSMTG 462
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_BLOFL (Fumarate hydratase class II OS=Blochmannia floridanus GN=fumC PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.768e-20 Identity = 49/111 (44.14%), Postives = 75/111 (67.57%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 S+G +LN ++P+I L S+RLL D+ +F C+ GI+ +RI KLL++SLMLVT+L+ IGYD +A +A+ A+ G TLK A+++ G + ++FD+ V PE MI P Sbjct: 336 SSGQLQLNTYRPLIIYNFLQSIRLLTDSIKNFHDYCIVGIRPKFKRIEKLLNKSLMLVTALSSHIGYDKSAQIAQTAYLNGITLKAASIQSGYVTEKQFDDWVCPENMIYP 446
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC2_BRAJA (Fumarate hydratase class II 2 OS=Bradyrhizobium japonicum GN=fumC2 PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 1.955e-19 Identity = 48/111 (43.24%), Postives = 68/111 (61.26%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 + G+ E+NV+KP+I + S+ +L D +F V G + NR++I + + SLMLVT+L P IGYD A+ +A A TLK AALKLG + EFD +V P KM+ P Sbjct: 352 AGGYLEMNVYKPLIIHNIAQSVTILTDGCTNFRTFLVEGTEPNRKKIKEYVERSLMLVTALAPVIGYDKASRIAHYAMDNDLTLKSAALKLGFVTEPEFDRIVDPAKMVKP 462
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_CHLMU (Fumarate hydratase class II OS=Chlamydia muridarum GN=fumC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.553e-19 Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 331 + G+FELNV KP+I L S+ LL A SF V G++ NR ++ + + SLMLVT+L P +GYD + +A KA E +LK+A + LG L+ +EFD VVP M+G Sbjct: 349 TKGNFELNVMKPVIIYDFLQSVNLLSGAMRSFADYFVSGLKVNRGQLQQNVERSLMLVTALAPVLGYDKCSKIALKAFHENLSLKEACVSLGFLSEQEFDTHVVPGLMLG 458
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_CHLTR (Fumarate hydratase class II OS=Chlamydia trachomatis GN=fumC PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.267e-18 Identity = 47/110 (42.73%), Postives = 69/110 (62.73%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 331 + G+FELNV KP+I L S+ LL A SF V G++ N+ ++ + + SLMLVT+L P +GYD + +A KA E +LK+A + LG L+ +EFD V+P M+G Sbjct: 349 TKGNFELNVMKPVIIYDFLQSVNLLAGAMRSFADYFVCGLKVNKGQLQQNVERSLMLVTALAPVLGYDKCSKIALKAFHENLSLKEACVSLGFLSEKEFDEHVIPGLMVG 458
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: FUMC_PROMP (Fumarate hydratase class II OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=fumC PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 6.289e-18 Identity = 47/109 (43.12%), Postives = 68/109 (62.39%), Query Frame = 2 Query: 2 SNGHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 328 ++G ++N +KP+I +L S++LL A ++F V GIQ N + I L SLMLVT+L PKIGY+ AA +A A E LK+A +KLG L + EF++ + KMI Sbjct: 353 ASGTLQMNEYKPLIGFNILTSIKLLNHAISNFRLKLVEGIQPNPKTIKANLENSLMLVTALVPKIGYEKAAEIANLAFNESINLKEATIKLGYLTANEFEDAINTNKMI 461
BLAST of FC932199 vs. ExPASy Swiss-Prot
Match: ASPA_HELPY (Aspartate ammonia-lyase OS=Helicobacter pylori GN=aspA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.401e-17 Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = 2 Query: 8 GHFELNVFKPMIASGLLHSLRLLGDASASFVKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 334 G +LNVF+P+IA L HS +LG A + CV GI AN + + S+ +VT+LNP IGY+ +A +AK+A K ++ D AL+ +L E+ D++ PE M+ P Sbjct: 352 GQLQLNVFEPVIAYKLFHSFVILGRAIETLTTKCVEGITANEKICHDYVFNSIGIVTALNPHIGYEKSAMIAKEALKSDRSIYDIALEKKILTKEQLDDIFKPENMLSP 460 The following BLAST results are available for this feature:
BLAST of FC932199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932199 ID=FC932199; Name=FC932199; organism=Citrus clementina; type=EST; length=512bpback to top |