FC932202
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932202 vs. ExPASy Swiss-Prot
Match: RS6_YEAST (40S ribosomal protein S6 OS=Saccharomyces cerevisiae GN=RPS6A PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.136e-33 Identity = 75/120 (62.50%), Postives = 89/120 (74.17%), Query Frame = 3 Query: 3 GEGELPGLTDTVVPKRLGPKRATKIRRFFGLDKKDDVRKFVIRRTVTKEGKQDYTKAPKIQRLVTPQRLXXXXXXXXXXXXXXETARDAANDYAKLLAGRVHEEKAKRDELRKRRASSMR 362 GE EL GLTDT VPKRLGPKRA IR+FFGL K+DDVR FVIRR VTK G++ YTKAPKIQRLVTPQRL + R+AA +YA+LLA R+ E KA++ E+RKRRASS++ Sbjct: 117 GEQELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFVIRREVTK-GEKTYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQAQREAAAEYAQLLAKRLSERKAEKAEIRKRRASSLK 235
BLAST of FC932202 vs. ExPASy Swiss-Prot
Match: RS6_DEBHA (40S ribosomal protein S6 OS=Debaryomyces hansenii GN=RPS6 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.157e-31 Identity = 70/120 (58.33%), Postives = 87/120 (72.50%), Query Frame = 3 Query: 3 GEGELPGLTDTVVPKRLGPKRATKIRRFFGLDKKDDVRKFVIRRTVTKEGKQDYTKAPKIQRLVTPQRLXXXXXXXXXXXXXXETARDAANDYAKLLAGRVHEEKAKRDELRKRRASSMR 362 G+ ++ GLTDT PKRLGPKRA IR+FFGL K+DDVR+FV+RR V K G + YTKAPKIQRLVTPQ L + RDAA +YA+LLA R+HE KA+R E++KRRASS++ Sbjct: 117 GDSDIEGLTDTTTPKRLGPKRANNIRKFFGLTKEDDVRQFVVRREVVK-GDKKYTKAPKIQRLVTPQTLQRKRALKAQKVKNAQQQRDAAAEYAQLLAQRLHERKAERAEIKKRRASSLK 235
BLAST of FC932202 vs. ExPASy Swiss-Prot
Match: RS6_CANGA (40S ribosomal protein S6 OS=Candida glabrata GN=RPS6A PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.578e-31 Identity = 73/120 (60.83%), Postives = 87/120 (72.50%), Query Frame = 3 Query: 3 GEGELPGLTDTVVPKRLGPKRATKIRRFFGLDKKDDVRKFVIRRTVTKEGKQDYTKAPKIQRLVTPQRLXXXXXXXXXXXXXXETARDAANDYAKLLAGRVHEEKAKRDELRKRRASSMR 362 GE EL G+TD VPKRLGPKRA IR+FFGL K+DDVR FVIRR VTK G++ YTKAPKIQRLVTPQRL + R+AA +YA+LLA R+ E KA++ E RKRRASS++ Sbjct: 117 GEQELEGVTDATVPKRLGPKRANHIRKFFGLTKEDDVRDFVIRREVTK-GEKTYTKAPKIQRLVTPQRLQRKRYQRNLKVRNAQAQREAAAEYAQLLAKRLAERKAEKAETRKRRASSLK 235
BLAST of FC932202 vs. ExPASy Swiss-Prot
Match: RS6B_SCHPO (40S ribosomal protein S6-B OS=Schizosaccharomyces pombe GN=rps6b PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.796e-31 Identity = 71/123 (57.72%), Postives = 88/123 (71.54%), Query Frame = 3 Query: 3 GEGELPGLTDTVVPKRLGPKRATKIRRFFGLDKKDDVRKFVIRRTVT--KEGKQDYTKAPKIQRLVTPQRLXXXXXXXXXXXXXXETARDAANDYAKLLAGRVHEEKAKRDELRKRRASSMRK 365 GE ++PGLTD VPKRLGPKRA+KIRRFF L K+DDVR+FVIRR V KEGK+ YTKAPKIQRLVTP+ L E R+ A ++A+L+A RV E K K++ ++ RRASSM+K Sbjct: 117 GEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFVIRREVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQAEKNREEAAEFAQLMAKRVAEAKQKKEVVKARRASSMKK 239
BLAST of FC932202 vs. ExPASy Swiss-Prot
Match: RS6A_SCHPO (40S ribosomal protein S6-A OS=Schizosaccharomyces pombe GN=rps6a PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 9.796e-31 Identity = 71/123 (57.72%), Postives = 88/123 (71.54%), Query Frame = 3 Query: 3 GEGELPGLTDTVVPKRLGPKRATKIRRFFGLDKKDDVRKFVIRRTVT--KEGKQDYTKAPKIQRLVTPQRLXXXXXXXXXXXXXXETARDAANDYAKLLAGRVHEEKAKRDELRKRRASSMRK 365 GE ++PGLTD VPKRLGPKRA+KIRRFF L K+DDVR+FVIRR V KEGK+ YTKAPKIQRLVTP+ L E R+ A ++A+L+A RV E K KR+ ++ RRASS++K Sbjct: 117 GEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFVIRREVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQAEKNREEAAEFAQLMAKRVAEAKQKREVVKARRASSLKK 239
BLAST of FC932202 vs. ExPASy Swiss-Prot
Match: RS6_KLULA (40S ribosomal protein S6 OS=Kluyveromyces lactis GN=RPS6 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.671e-30 Identity = 70/120 (58.33%), Postives = 87/120 (72.50%), Query Frame = 3 Query: 3 GEGELPGLTDTVVPKRLGPKRATKIRRFFGLDKKDDVRKFVIRRTVTKEGKQDYTKAPKIQRLVTPQRLXXXXXXXXXXXXXXETARDAANDYAKLLAGRVHEEKAKRDELRKRRASSMR 362 GE E+ G+T+ VPKRLGPKRA IR+FFGL K+DDVR +VIRR VTK G + YTKAPKIQRLVTPQRL + R+AA +YA+LLA R+ E KA++ E+RKRRASS++ Sbjct: 117 GEQEIEGITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDYVIRREVTK-GDKSYTKAPKIQRLVTPQRLQRKRQQKSLKIKNAQAQREAAAEYAQLLAKRLSERKAEKAEVRKRRASSLK 235
BLAST of FC932202 vs. ExPASy Swiss-Prot
Match: RS6_ASHGO (40S ribosomal protein S6 OS=Ashbya gossypii GN=RPS6 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.020e-29 Identity = 69/120 (57.50%), Postives = 85/120 (70.83%), Query Frame = 3 Query: 3 GEGELPGLTDTVVPKRLGPKRATKIRRFFGLDKKDDVRKFVIRRTVTKEGKQDYTKAPKIQRLVTPQRLXXXXXXXXXXXXXXETARDAANDYAKLLAGRVHEEKAKRDELRKRRASSMR 362 G+ E+ G+T+ VPKRLGPKRA IR+FFGL K DDVR FVIRR V K G + YTKAPKIQRLVTPQRL + R+AA +YA+LLA R+ E+KA++ E RKRRASS++ Sbjct: 117 GDQEIEGITNESVPKRLGPKRANNIRKFFGLTKDDDVRDFVIRREVVK-GDKTYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQAQREAAAEYAQLLAKRLTEKKAEKAEERKRRASSLK 235
BLAST of FC932202 vs. ExPASy Swiss-Prot
Match: RS6_ONCMY (40S ribosomal protein S6 OS=Oncorhynchus mykiss GN=rps6 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.564e-28 Identity = 66/127 (51.97%), Postives = 90/127 (70.87%), Query Frame = 3 Query: 3 GEGELPGLTDTVVPKRLGPKRATKIRRFFGLDKKDDVRKFVIRRTVTKEGKQDYTKAPKIQRLVTPQRLXXXXXXXXXXXXXXETARDAANDYAKLLAGRVHEEKAKRDE--LRKRRASSMRK*TSR 377 GE ++PGLTD+ VP+RLGPKRA+KIR+ F L K+DDVR++V+RR +TKEGK+ TKAP+IQRLVTP+ L + ++ A++YAKLLA R+ E K KR E ++RR SS+R TS+ Sbjct: 117 GEKDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYVVRRPLTKEGKKPRTKAPRIQRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSK 243
BLAST of FC932202 vs. ExPASy Swiss-Prot
Match: RS6_CHICK (40S ribosomal protein S6 OS=Gallus gallus GN=RPS6 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.043e-28 Identity = 66/127 (51.97%), Postives = 88/127 (69.29%), Query Frame = 3 Query: 3 GEGELPGLTDTVVPKRLGPKRATKIRRFFGLDKKDDVRKFVIRRTVTKEGKQDYTKAPKIQRLVTPQRLXXXXXXXXXXXXXXETARDAANDYAKLLAGRVHEEKAKRDE--LRKRRASSMRK*TSR 377 GE ++PGLTDT VP+RLGPKRA++IR+ F L K+DDVR++V+R+ + KEGK+ TKAPKIQRLVTP+ L + ++ A DYAKLLA R+ E K KR E ++RR SS+R TS+ Sbjct: 117 GEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNKEEAADYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSK 243
BLAST of FC932202 vs. ExPASy Swiss-Prot
Match: RS6_KLUMA (40S ribosomal protein S6 OS=Kluyveromyces marxianus GN=RPS6 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.668e-28 Identity = 69/120 (57.50%), Postives = 86/120 (71.67%), Query Frame = 3 Query: 3 GEGELPGLTDTVVPKRLGPKRATKIRRFFGLDKKDDVRKFVIRRTVTKEGKQDYTKAPKIQRLVTPQRLXXXXXXXXXXXXXXETARDAANDYAKLLAGRVHEEKAKRDELRKRRASSMR 362 G+ E+ G+T+ VPKRLGPKRA IR+FFGL K+DDVR +VIRR VTK G++ YTKAPKIQRLVTPQRL + R+AA +YA+LLA R+ E KA E+RKRRASS++ Sbjct: 117 GDQEIEGVTNETVPKRLGPKRANNIRKFFGLTKEDDVRDYVIRREVTK-GEKTYTKAPKIQRLVTPQRLQRKRQQKALKIKNAQAQREAAAEYAQLLAKRLAERKA---EVRKRRASSLK 232 The following BLAST results are available for this feature:
BLAST of FC932202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932202 ID=FC932202; Name=FC932202; organism=Citrus clementina; type=EST; length=714bpback to top |