FC932202
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932202 vs. ExPASy Swiss-Prot
Match: RS6_LEIIN (40S ribosomal protein S6 OS=Leishmania infantum GN=RPS6 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.242e-17 Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 3 Query: 3 GEGELPGLTDTVVPKRLGPKRATKIRRFFGLDKKDDVRKFVIRRTVTKEGKQDYTKAPKIQRLVTPQ 203 G+ + G+TDT P+RLGPKRA+KIR+ F L + +DVRK+V+RR V K GK+D KAPKIQRL+TP+ Sbjct: 120 GDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRRVVKSGKKDRLKAPKIQRLITPR 186
BLAST of FC932202 vs. ExPASy Swiss-Prot
Match: RS6_CAEEL (40S ribosomal protein S6 OS=Caenorhabditis elegans GN=rps-6 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.164e-17 Identity = 52/117 (44.44%), Postives = 65/117 (55.56%), Query Frame = 3 Query: 3 GEGELPGLTDTVVPKRLGPKRATKIRRFFGLDKKDDVRKFVIRRTVTKEGKQDYTKAPKIQRLVTPQRLXXXXXXXXXXXXXXETARDAANDYAKLLAGRVHEEKAKRDELRKRRAS 353 G+GE+ GLTD+V+P++LGPKRA+KIR+ F L K DDV K+VI T T APKIQRL+TP R+ RD A Y KLLA EE + R+ AS Sbjct: 117 GDGEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDGVTKTIAPKIQRLITPARIARKKYLLRQKRNQKIKMRDDAAAYHKLLAKYSKEEHDAKIARRRSSAS 233
BLAST of FC932202 vs. ExPASy Swiss-Prot
Match: RS6_DICDI (40S ribosomal protein S6 OS=Dictyostelium discoideum GN=rps6 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.518e-15 Identity = 50/109 (45.87%), Postives = 63/109 (57.80%), Query Frame = 3 Query: 3 GEGELPGLTDTVVPKRLGPKRATKIRRFFGLDKKDDVRKFVIRRTVTKEGKQD-YTKAPKIQRLVTPQRLXXXXXXXXXXXXXXETARDAANDYAKLLAGRVHEEKAKR 326 G+ E+PGLTD P GPKRA+ IR+ F L K +DVR FVIRR + K+ +KAPKIQRLVTP + A + A +YAKL+A R + KAKR Sbjct: 117 GDAEIPGLTDVSFPASKGPKRASNIRKLFKLSKDEDVRSFVIRRELPATDKRKAKSKAPKIQRLVTPTTVARRKALRAKKAARHTKASNEAAEYAKLVAQR-QQAKAKR 224
BLAST of FC932202 vs. ExPASy Swiss-Prot
Match: RS6_TOBAC (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13 Identity = 48/128 (37.50%), Postives = 67/128 (52.34%), Query Frame = 3 Query: 3 GEGELPGLTDTVVPKRLGPKRATKIRRFFGLDKKDDVRKFVIRRTVTKEGKQDYTKAPKIQRLVTPQRLXXXXXXXXXXXXXXETARDAANDYAKLLAGRVHEEKAKRDELRKRRASSMRK*TSRPAV 386 GE +LPGLTDT P+ GP+ + + K+DDVRK+V T K +KAPKIQRLVTP L A+ A +Y KLLA R+ E++ KR E ++ S + S+P++ Sbjct: 74 GENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYV-NTTAEFTTKWKGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQREKRSESLAKKRSRLSA-ASKPSI 197 The following BLAST results are available for this feature:
BLAST of FC932202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932202 ID=FC932202; Name=FC932202; organism=Citrus clementina; type=EST; length=714bpback to top |