FC932207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_THEAC (50S ribosomal protein L14P OS=Thermoplasma acidophilum GN=rpl14p PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.373e-36 Identity = 73/133 (54.89%), Postives = 98/133 (73.68%), Query Frame = 3 Query: 63 GAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 G AG + T GLP+GA + C DN+GAR++ +I VK + R+PAAGVGDM MA+VKKG PE+R KV+ AVV+RQ +P+RRPDG + FEDNA V+V GE++GS I GPV +EAAE WPRIA+ + +++ Sbjct: 3 GIAG---RQTRGLPLGANITCADNTGARSISLIDVKAWHGKARRIPAAGVGDMFMASVKKGTPEMRSKVVYAVVIRQKRPYRRPDGTMVQFEDNAAVLVTPDGEVRGSEIKGPVAREAAERWPRIAAIASIIV 132
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_THEVO (50S ribosomal protein L14P OS=Thermoplasma volcanium GN=rpl14p PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.171e-35 Identity = 71/133 (53.38%), Postives = 99/133 (74.44%), Query Frame = 3 Query: 63 GAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 G AG +++ GLP+GA + C DN+GAR++ +I VK + R+PAAGVGDM +A+VKKG PE+R KV+ AVV+RQ +P+RRPDG + FEDNA V+V GE++GS I GPV +EAAE WPRIA+ + +++ Sbjct: 3 GIAGREIR---GLPLGANIVCADNTGARSISLIDVKAYHGKARRIPAAGVGDMFIASVKKGTPEMRSKVVYAVVIRQKRPYRRPDGTMVEFEDNAAVLVTPDGEVRGSEIKGPVAREAAERWPRIAAIASIIV 132
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_STAMF (50S ribosomal protein L14P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.407e-34 Identity = 70/140 (50.00%), Postives = 100/140 (71.43%), Query Frame = 3 Query: 42 MSKRGRGGAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 M K+G+G A ++ ++ GL VG+ + DNSGA+ + II V G RL R+P AG+GD+V+ TVKKG PE+RK+V+ AV+VRQ +P+RRPDG ++ FEDNA IV +G KGS I GP+ KE AE WP++A+ + +V+ Sbjct: 1 MPKKGKGKPAFSRRRIATGLQVGSYVRVADNSGAKLVKIIGVPGYKGRLRRIPPAGIGDLVVVTVKKGTPEMRKQVVKAVIVRQKRPFRRPDGTWVAFEDNAVAIVTPEGTPKGSEIRGPIAKEVAERWPQLANIATIVV 140
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL23_ENCCU (60S ribosomal protein L23 OS=Encephalitozoon cuniculi GN=RPL23 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34 Identity = 68/127 (53.54%), Postives = 91/127 (71.65%), Query Frame = 3 Query: 78 KLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVV 458 + KMT G+ V +M C DNSGA+ L I VK RLNRLPAA GD+ + +VKKGKPELRKKV A+++RQ K WRR DG + FEDNA V++N KGE++G+ I GPV +E A++WP+I+S + + Sbjct: 19 RYKMTRGIQVETLMKCADNSGAKILRCIGVKRYRGRLNRLPAAAPGDICVVSVKKGKPELRKKVHYAILIRQKKIWRRTDGSHIMFEDNAAVLINNKGELRGAQIAGPVPREVADMWPKISSQASSI 145
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_PICTO (50S ribosomal protein L14P OS=Picrophilus torridus GN=rpl14p PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.119e-34 Identity = 69/124 (55.65%), Postives = 92/124 (74.19%), Query Frame = 3 Query: 90 TLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 T GLP+GA++ C DN+GA+ + +I VK + R+PAAGVGDM +A+VKKG PE+R KV+ AVVVRQ +P+RR DG + FEDNA V+V GE++GS I GPV +EAAE WPRIA+ S ++ Sbjct: 9 TRGLPLGALIPCVDNTGAKMISLIDVKALHTVAKRIPAAGVGDMFIASVKKGTPEMRSKVVYAVVVRQRRPYRRADGTMIEFEDNAAVLVTPDGEVRGSEIKGPVAREAAERWPRIAAISSTIV 132
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_AERPE (50S ribosomal protein L14P OS=Aeropyrum pernix GN=rpl14p PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.465e-33 Identity = 68/140 (48.57%), Postives = 101/140 (72.14%), Query Frame = 3 Query: 42 MSKRGRGGAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 M+K+ + G ++ + GL VG+ + DNSGA+ + IISV + RL RLP+AGVGD+V+ +VKKG P++R++V+ AVVVRQ +P+RRPDG ++ FEDNA VIVN G +GS + GP+ +EAAE WPR+A + +++ Sbjct: 1 MAKKKKYGVVVSRYGVNTGLQVGSYVPVADNSGAKEVMIISVPQVKTRLRRLPSAGVGDLVVVSVKKGTPQMRRQVVYAVVVRQRRPFRRPDGTWVSFEDNAVVIVNPDGTPRGSEVRGPIAREAAERWPRVAKIATMIV 140
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_HYPBU (50S ribosomal protein L14P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl14p PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.526e-33 Identity = 70/137 (51.09%), Postives = 96/137 (70.07%), Query Frame = 3 Query: 51 RGRGGAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 +G GA G + + GL VG+ + DNSGA+ II V G RL R+P A VGDMV+ TVKKG PE+RK+V+ A+V+RQ +P+RRPDG ++ FEDNA VIV+ G KGS I GPV +EAAE WP++A+ + +++ Sbjct: 3 KGAAGA-GPRRHIAAGLQVGSYVKVADNSGAKEAMIIGVIGYKGRLRRIPPAAVGDMVVVTVKKGTPEMRKQVVRAIVIRQRRPYRRPDGTWIAFEDNAVVIVSPDGTPKGSEIRGPVAREAAERWPKVANIASIII 138
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_METTH (50S ribosomal protein L14P OS=Methanobacterium thermoautotrophicum GN=rpl14p PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.008e-32 Identity = 68/126 (53.97%), Postives = 93/126 (73.81%), Query Frame = 3 Query: 84 KMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 K+T LPVGA + C DN+GAR + IISV+G RL AAGVGDMV+ +VKKG ++R++V+ AV+VRQ K +RRPDG+ + FEDNA VIV+ +G +KGS I GPV KEAA+ WP + S + +++ Sbjct: 7 KVTRALPVGARLQCVDNTGAREVEIISVRGYKGVRRRLAAAGVGDMVVVSVKKGTVDMRREVLNAVIVRQKKEYRRPDGLRVKFEDNAAVIVSPEGVLKGSEIRGPVAKEAADRWPSVGSAASIIV 132
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_METKA (50S ribosomal protein L14P OS=Methanopyrus kandleri GN=rpl14p PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32 Identity = 69/121 (57.02%), Postives = 88/121 (72.73%), Query Frame = 3 Query: 99 LPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 LPVGA + C DN+GAR L II+VKG RLP AG+GDMV+ +VK+G P++RK+V+ AV+VRQ K +RRPDG + FEDNA VIV G +GS I GPV KEAAE WPRI S + +++ Sbjct: 13 LPVGARLVCADNTGARELQIIAVKGYKGVRRRLPNAGIGDMVVCSVKEGTPDMRKEVVNAVIVRQRKEYRRPDGTRVKFEDNAAVIVTPDGAPRGSEIRGPVAKEAAERWPRIGSIASIIV 133
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_IGNH4 (50S ribosomal protein L14P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl14p PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32 Identity = 70/135 (51.85%), Postives = 93/135 (68.89%), Query Frame = 3 Query: 57 RGGAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 + A ++ K+ GL VG+ + DNSGA+ II V G RL R+P AGVGDMV+ TVKKG PE+R +V+ A+VVRQ KP+RRPDG ++ FEDNA VIV+ G +GS I GPV +EA E WPRI + + +V+ Sbjct: 3 KASANKSRRKVVTGLQVGSYVKVTDNSGAKVAMIIGVPGYHGRLRRIPPAGVGDMVVVTVKKGTPEMRHQVVRAIVVRQRKPFRRPDGTWVAFEDNAVVIVSEDGTPRGSEIRGPVAREAVERWPRIGNVASIVV 137 The following BLAST results are available for this feature:
BLAST of FC932207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 478
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932207 ID=FC932207; Name=FC932207; organism=Citrus clementina; type=EST; length=697bpback to top |