FC932207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_HALS3 (50S ribosomal protein L14P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28 Identity = 63/128 (49.22%), Postives = 87/128 (67.97%), Query Frame = 3 Query: 78 KLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 K +T GL G+++ C DN+GAR L I SV G R NR P AG+GD + +V KG PE+R++V+ AVVVRQ KP RRPDG + FEDNA VI++ GE +G+ I GP+ +E AE + IAS + +++ Sbjct: 5 KADITQGLEKGSLITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAERYGTIASTATMIV 132
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_SULSO (50S ribosomal protein L14P OS=Sulfolobus solfataricus GN=rpl14p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.570e-28 Identity = 62/130 (47.69%), Postives = 87/130 (66.92%), Query Frame = 3 Query: 72 GNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 G++ +T L +V+N DNSG + II V G L R+P A + DMVM ++KKG PE+RK+ AV+VRQ P+RRPDG ++ FEDNA VI+N G KG+ + GP+ +EAAE WP+IAS + +V+ Sbjct: 9 GSRKGLTPALQHYSVVNVADNSGGKEAMIIGVYGYRGVLRRVPFANIADMVMVSIKKGTPEVRKQKFRAVIVRQRMPYRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIAREAAERWPKIASLATLVV 138
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_METS5 (50S ribosomal protein L14P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl14p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28 Identity = 62/130 (47.69%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 72 GNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 G++ +T + ++N DNSGA+ IISV G L R+P A VGD+VM +V+KG P++RK+ AVV+RQ P+RRPDG ++ F+DNA VIVN G KG+ I GPV +EAAE WP++AS + +++ Sbjct: 9 GSRKGLTPAVQNYTMVNVSDNSGAKEAMIISVFGYRGALRRVPYANVGDLVMVSVRKGAPDVRKQKFKAVVIRQRMPFRRPDGTWISFDDNAVVIVNPDGTAKGTEIRGPVAREAAERWPKVASLATLIV 138
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_SULTO (50S ribosomal protein L14P OS=Sulfolobus tokodaii GN=rpl14p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.384e-28 Identity = 62/130 (47.69%), Postives = 86/130 (66.15%), Query Frame = 3 Query: 72 GNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 G++ +T GL + DNSGA+ II + G L R+P A + D+VM +V+KG PE+RK+ AV+VRQ P+RRPDG ++ FEDNA VIVN G KG+ I GP+ KEAAE WP++AS + +V+ Sbjct: 12 GSRKGLTPGLQHYTTVTVADNSGAKEAVIIGIYGYKGVLRRIPFANIADLVMVSVRKGTPEVRKQKFKAVIVRQRMPFRRPDGTWIAFEDNAVVIVNPDGTPKGTEIRGPIAKEAAERWPKVASIATMVI 141
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_PYRIL (50S ribosomal protein L14P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl14p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28 Identity = 66/144 (45.83%), Postives = 96/144 (66.67%), Query Frame = 3 Query: 42 MSKRGRGGAAG--NKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARL--NRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 M+KRG G + +T G+ + +++ DNSGAR + +I V G ++ R+P AGVGDMV+ V++GKPELRK++ A+VVRQ +P+RRPDG ++ FEDNA VIV +G+ KGS I GPV EA WP IA+ + +++ Sbjct: 1 MAKRGGKRTVGVSYRFHVTPGIFLNSLVPVADNSGARLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIANLASIIV 144
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_CALMQ (50S ribosomal protein L14P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl14p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28 Identity = 62/144 (43.06%), Postives = 101/144 (70.14%), Query Frame = 3 Query: 42 MSKRGRGGAAGN--KLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARL--NRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 M+KRG G + +T G+ + +++N DNSGA+ + +I V G ++ R+P VGDMV+ +V++GKPE+RK+++ A+VVRQ +P+RRPDG ++ FEDNA VIV +G++KG+ + GPV EAA+ WP++AS + +++ Sbjct: 1 MAKRGGPRTVGVPWRFHLTPGIFMNSLVNVADNSGAKVVKVIGVVGHYSKNVHRRIPGVSVGDMVVVSVQEGKPEMRKQILRAIVVRQRRPFRRPDGTWVAFEDNAVVIVTEEGQVKGTEVHGPVAMEAAQRWPQVASIATMII 144
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_PYRAE (50S ribosomal protein L14P OS=Pyrobaculum aerophilum GN=rpl14p PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.666e-27 Identity = 66/144 (45.83%), Postives = 96/144 (66.67%), Query Frame = 3 Query: 42 MSKRGRGGAAG--NKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARL--NRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 M+KRG G + +T G+ + +++ DNSGA+ + +I V G ++ R+P AGVGDMV+ V++GKPELRK++ A+VVRQ +P+RRPDG ++ FEDNA VIV +G+ KGS I GPV EA WP IA+ + +V+ Sbjct: 1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIANLASIVV 144
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_PYRCJ (50S ribosomal protein L14P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 66/144 (45.83%), Postives = 96/144 (66.67%), Query Frame = 3 Query: 42 MSKRGRGGAAG--NKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARL--NRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 M+KRG G + +T G+ + +++ DNSGA+ + +I V G ++ R+P AGVGDMV+ V++GKPELRK++ A+VVRQ +P+RRPDG ++ FEDNA VIV +G+ KGS I GPV EA WP IA+ + +V+ Sbjct: 1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKSVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIANLASIVV 144
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_METAC (50S ribosomal protein L14P OS=Methanosarcina acetivorans GN=rpl14p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 61/130 (46.92%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 72 GNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 G + + L GA + C DN+GA+ + IISVK NR+P AG+GDM + +VKKG PE+RK+V+ AVVVRQ + +RRPDG+ + FEDNA VI + +G KG+ I GPV +E AE +P+I + + +++ Sbjct: 3 GMRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEEGIPKGTDIKGPVAREVAERFPKIGTTASIIV 132
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_KORCO (50S ribosomal protein L14P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl14p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 64/130 (49.23%), Postives = 83/130 (63.85%), Query Frame = 3 Query: 72 GNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 G K K+T GLPV A + C DN+GA+ L II V G R +R+P A VGDMV VK+GK +L K A+VVRQ P+RR +G ++ FEDNA V+VN G +GS GP+ KEA E WP ++ S V+ Sbjct: 12 GVKPKITHGLPVRARLKCADNTGAKLLMIIGVHGYKGRKDRVPTASVGDMVTVVVKRGKYDLMHKPFKAIVVRQRMPYRRKNGQWVVFEDNAAVLVNDDGTPRGSEFRGPIAKEAIERWPSLSVISAQVV 141 The following BLAST results are available for this feature:
BLAST of FC932207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 478
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932207 ID=FC932207; Name=FC932207; organism=Citrus clementina; type=EST; length=697bpback to top |