FC932207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_HALLT (50S ribosomal protein L14P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl14p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 62/128 (48.44%), Postives = 86/128 (67.19%), Query Frame = 3 Query: 78 KLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 K +T GL G+++ C DN+GAR L +ISV G NR P AG+GD V +V KG PE+R++V+ AVVVRQ KP RRP+G + FEDNA VI++ E +G+ I GPV +E AE + IAS + +++ Sbjct: 5 KADVTQGLSKGSLITCADNTGARELKVISVAGYSGTKNRHPKAGIGDKVTVSVTKGTPEMRRQVLEAVVVRQRKPIRRPNGTRVKFEDNAAVIIDDLDEPRGTEIKGPVAREVAERFGSIASTATMIV 132
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_NITMS (50S ribosomal protein L14P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27 Identity = 64/140 (45.71%), Postives = 91/140 (65.00%), Query Frame = 3 Query: 42 MSKRGRGGAAGNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 M+K+ G + +T +PVGA + C DNSGA+ L +I+V R +RLP+A VGD VKKG ELRK+V AV++RQ P RR +G+ + FEDNA V++ +GE KG+ I GPV EA+E WPR+A+ + +V+ Sbjct: 1 MAKQAGKGVEEFRPYVTKVIPVGANIVCADNSGAKILEVINVPRHRTRASRLPSASVGDFCNVVVKKGPAELRKQVYGAVIIRQKYPVRRLNGVRVCFEDNAAVLITPEGETKGTDIKGPVAAEASEKWPRVANLASMVV 140
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_PYRAR (50S ribosomal protein L14P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl14p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27 Identity = 65/144 (45.14%), Postives = 95/144 (65.97%), Query Frame = 3 Query: 42 MSKRGRGGAAG--NKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARL--NRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 M+KRG G + +T G+ + +++ DNSGA+ + +I V G ++ R+P AGVGDMV+ VK+GKPELR+++ +VVRQ +P+RRPDG ++ FEDNA VIV +G+ KGS I GPV EA WP IA+ + +V+ Sbjct: 1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVKEGKPELRRQIFRGIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIANLASIVV 144
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_METBF (50S ribosomal protein L14P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl14p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27 Identity = 60/130 (46.15%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 72 GNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 G + + L GA + C DN+GA+ + IISVK NR+P AG+GDM + +VKKG PE+RK+V+ AVVVRQ + +RRPDG+ + FEDNA VI + +G KG+ I GP+ +E AE +P+I + + +++ Sbjct: 3 GIRSNIPRALNAGAKVPCVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLRVSFEDNAMVITDEEGIPKGTDIKGPIAREVAERYPKIGTTASIIV 132
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_METMA (50S ribosomal protein L14P OS=Methanosarcina mazei GN=rpl14p PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 6.330e-27 Identity = 60/130 (46.15%), Postives = 88/130 (67.69%), Query Frame = 3 Query: 72 GNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 G + + L GA + C DN+GA+ + IISVK NR+P AG+GDM + +VKKG PE+RK+++ AVVVRQ + +RRPDG+ + FEDNA VI + G KG+ I GPV +E AE +P+I + + +++ Sbjct: 3 GIRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQILLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEDGIPKGTDIKGPVAREVAERFPKIGTTASIIV 132
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_HALWD (50S ribosomal protein L14P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl14p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.267e-27 Identity = 60/128 (46.88%), Postives = 85/128 (66.41%), Query Frame = 3 Query: 78 KLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 K +T GL G+++ C DN+GAR L +ISV G NR P AG+GD V +V KG PE+R++V+ AV+VRQ K RRPDG + FEDNA VI++ E +G+ I GP+ +E AE + IAS + +++ Sbjct: 5 KADVTKGLERGSLVTCADNTGARELKVISVMGSSGTKNRHPKAGIGDQVTVSVTKGTPEMRRQVLEAVIVRQRKSIRRPDGTRVKFEDNAAVIIDEMEEPRGTEIKGPIAREVAERFGSIASTATMIV 132
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_NATPD (50S ribosomal protein L14P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl14p PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26 Identity = 56/125 (44.80%), Postives = 84/125 (67.20%), Query Frame = 3 Query: 87 MTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 +T GL G+++ C DN+GAR L + S+ G NR P AG+GD + +V KG PE+R++V+ AVV+RQ KP RRPDG + FEDNA VIV+ + +G+ + GP+ +E AE + IAS + +++ Sbjct: 8 VTQGLEKGSLITCADNTGARELKVTSISGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVIRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAERFGSIASTATIIV 132
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_SULAC (50S ribosomal protein L14P OS=Sulfolobus acidocaldarius GN=rpl14p PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26 Identity = 58/130 (44.62%), Postives = 85/130 (65.38%), Query Frame = 3 Query: 72 GNKLKMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 G++ T L + + DNSGA+ II + G L R+P A + D+VM +V+KG P++RK+ AV+VRQ P+RRPDG ++ FEDNA VI+N G KG+ + GP+ +EAAE WP+IAS + +V+ Sbjct: 9 GSRKGFTPALQHNSSVVVADNSGAKEAVIIGIYGYRGVLRRVPFANIADLVMVSVRKGSPDVRKQKFKAVIVRQRMPFRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIAREAAERWPKIASVATMVI 138
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_HALMA (50S ribosomal protein L14P OS=Haloarcula marismortui GN=rpl14p PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26 Identity = 57/125 (45.60%), Postives = 85/125 (68.00%), Query Frame = 3 Query: 87 MTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 +T GL G+++ C DN+GAR L +ISV G NR P AG+GD + +V KG PE+R++V+ AVVVRQ KP RRPDG + FEDNA VIV+ + +G+ + GP+ +E A+ + +AS + +++ Sbjct: 8 VTQGLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV 132
BLAST of FC932207 vs. ExPASy Swiss-Prot
Match: RL14_METLZ (50S ribosomal protein L14P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl14p PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.473e-25 Identity = 54/126 (42.86%), Postives = 86/126 (68.25%), Query Frame = 3 Query: 84 KMTLGLPVGAVMNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMVMATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIFLYFEDNAGVIVNAKGEMKGSAITGPVGKEAAELWPRIASNSGVVM 461 K+ L G+ M C DN+GAR + I+SV G NR P G+GD+ TVKKG P++++K++ AVVVRQ K +RRP+G+ + FE+NA +++N G+ +G+ I GPV +E AE +P++ S + +++ Sbjct: 7 KIPRALQTGSKMVCADNTGARVVQIVSVFGYHGVKNRQPKMGLGDLATVTVKKGTPDMKRKLVRAVVVRQKKEFRRPNGLRVSFEENAMILLNENGDPRGTDIKGPVAREVAERFPKVGSMATIII 132 The following BLAST results are available for this feature:
BLAST of FC932207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 478
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932207 ID=FC932207; Name=FC932207; organism=Citrus clementina; type=EST; length=697bpback to top |