FC932230
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMH_SCHPO (Fumarate hydratase, mitochondrial OS=Schizosaccharomyces pombe GN=fum1 PE=2 SV=3) HSP 1 Score: 199.134 bits (505), Expect = 6.701e-51 Identity = 101/148 (68.24%), Postives = 121/148 (81.76%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSK 441 RSLQNF IGGE+ER+P P+VRAFG+LK+ AA VN E+GLDP + AI QAAQEV +G+L+D+FPLVV+QTGSGTQSNMN+NEVIANRA EILG G +K VHPNDHVN SQSSNDTFPTVMHIA+ ++ L+P +K LH +L K Sbjct: 82 RSLQNFRIGGEKERLPLPLVRAFGVLKRAAASVNREFGLDPKLADAIEQAAQEVIDGRLDDNFPLVVFQTGSGTQSNMNSNEVIANRAIEILGGTLGSKKPVHPNDHVNMSQSSNDTFPTVMHIASVLQIHTHLLPAMKHLHRALKGK 229
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMH_CAEEL (Probable fumarate hydratase, mitochondrial OS=Caenorhabditis elegans GN=fum-1 PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 1.143e-50 Identity = 100/149 (67.11%), Postives = 114/149 (76.51%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSKS 444 RS NF IGG ERMP P++ AFGILKK AA VN E+GLD + AI QAA EV +GKL++HFPLV WQTGSGTQSNMN NEVI+NRA EILG + G +K VHPNDHVN SQSSNDTFPT MHIA NSRL+P LK L +LH+K+ Sbjct: 65 RSQMNFKIGGPEERMPIPVIHAFGILKKAAALVNTEFGLDKKLADAISQAADEVVDGKLDEHFPLVTWQTGSGTQSNMNVNEVISNRAIEILGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAVGREVNSRLLPALKKLRTALHNKA 213
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMH_DICDI (Fumarate hydratase, mitochondrial OS=Dictyostelium discoideum GN=fumH PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 2.815e-49 Identity = 98/149 (65.77%), Postives = 120/149 (80.54%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKR--GEKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSK 441 RSL+NFDIGGE E+MP +VR+FGILK+CAA VN +YGLD I I +AA EV EGKL+D FPLVV+QTGSGTQSNMNANEVI+NRA E++ KR +K+VHPNDHVN+SQSSNDTFPT MHIAAA N +L+P L++L ++ +K Sbjct: 47 RSLENFDIGGESEKMPLMVVRSFGILKRCAAIVNKKYGLDATIADNIAKAATEVVEGKLDDQFPLVVFQTGSGTQSNMNANEVISNRAIELMTGKRDFSKKLVHPNDHVNKSQSSNDTFPTCMHIAAAISINEKLVPALEMLLAAMRTK 195
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_RHILO (Fumarate hydratase class II OS=Rhizobium loti GN=fumC PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 2.913e-46 Identity = 99/150 (66.00%), Postives = 115/150 (76.67%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSKS 444 RSL NF IG E++ P IVRA G++K+ AA+VNME LDP +GKAI+ AAQEV +GKLNDHFPLVVWQTGSGTQSNMNANEVI+NRA E+LG G +K VHPNDHVN SQSSNDT+PT MHIA A LIP L LH +L +K+ Sbjct: 30 RSLGNFKIGWEKQ--PASIVRALGVVKRAAAEVNMEMKRLDPVVGKAIVDAAQEVIDGKLNDHFPLVVWQTGSGTQSNMNANEVISNRAIEMLGGVMGSKKPVHPNDHVNMSQSSNDTYPTAMHIACAEQVVHHLIPALHHLHKALDAKA 177
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_CAUCR (Fumarate hydratase class II OS=Caulobacter crescentus GN=fumC PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 3.221e-45 Identity = 97/150 (64.67%), Postives = 114/150 (76.00%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSKS 444 RSL NF IG E++ P P+VRA GI+K+ AA+ N+ G LDP I + I+ AA EV EGKLNDHFPLVVWQTGSGTQSNMNANEVI+NRA E+LG + G +K VHPNDHVN SQSSNDTFPT MHIA A L+P LK LH +L +K+ Sbjct: 28 RSLGNFKIGWEKQ--PLPVVRALGIVKRAAAEANLALGKLDPKIAETIIAAANEVIEGKLNDHFPLVVWQTGSGTQSNMNANEVISNRAIEMLGGEMGSKKPVHPNDHVNMSQSSNDTFPTAMHIACAEQVVHDLLPALKHLHKALAAKA 175
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_RHIME (Fumarate hydratase class II OS=Rhizobium meliloti GN=fumC PE=3 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 5.494e-45 Identity = 97/149 (65.10%), Postives = 114/149 (76.51%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSK 441 RSL NF IG E++ P IVRA GI+K+ AA+ NM G LDPAIG AI++AAQEV +GKL++HFPLVVWQTGSGTQSNMNANEV++NRA E+LG G +K VHPNDHVN SQSSNDT+PT MHIA A L+P LK LH +L K Sbjct: 28 RSLGNFKIGWEKQ--PLAIVRALGIVKQAAARANMALGRLDPAIGDAIVKAAQEVIDGKLDEHFPLVVWQTGSGTQSNMNANEVVSNRAIELLGGVMGSKKPVHPNDHVNMSQSSNDTYPTAMHIACAERVIHDLLPALKHLHKALEEK 174
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_THET2 (Fumarate hydratase class II OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=fumC PE=3 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 7.176e-45 Identity = 92/149 (61.74%), Postives = 114/149 (76.51%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSKS 444 RSL+NF IG +R RMP I+RA+G+LKK AA+ N+E G L I KAI+QAA+EV +GK +DHFPLVV+QTGSGTQ+NMN NEVIANRA+EILG G K VHPNDHVNR QSSNDTFPT M++A A + RL P ++ L + +K+ Sbjct: 27 RSLENFRIGTDRFRMPLEIIRAYGMLKKAAARANLELGELPEEIAKAIIQAAEEVVQGKWDDHFPLVVFQTGSGTQTNMNVNEVIANRASEILGKPLGSKYVHPNDHVNRGQSSNDTFPTAMYVAVALALHQRLYPAVEGLIRTFTAKA 175
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_AGRT5 (Fumarate hydratase class II OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=fumC PE=3 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 2.727e-44 Identity = 94/149 (63.09%), Postives = 112/149 (75.17%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEY-GLDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSK 441 RSL NF IG E++ P +VRA GI+K+ AA+ NM GLDP +G AI+ AAQEV +GKL +HFPLVVWQTGSGTQSNMNANEVI+NRA E+LG + G +K VHPNDHVN SQSSNDT+PT MHIA L+P LK LH +L +K Sbjct: 28 RSLGNFKIGWEKQ--PASVVRALGIVKQAAARANMALAGLDPKVGDAIIAAAQEVIDGKLTEHFPLVVWQTGSGTQSNMNANEVISNRAIEMLGGEMGTKKPVHPNDHVNMSQSSNDTYPTAMHIACVEEIVHHLLPALKHLHTALEAK 174
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_BRUSU (Fumarate hydratase class II OS=Brucella suis GN=fumC PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 4.651e-44 Identity = 94/149 (63.09%), Postives = 113/149 (75.84%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSK 441 RSLQNF IGGER MP P+V A G++K+ AA+ N+ G LDP +G+ I AA EV EGKL+DHFPLVVWQTGSGTQSNMNANEVI+NRA E+LG + G +K +HPNDHVN SQSSND+FPT +HIA A +RL P L+ L +L K Sbjct: 28 RSLQNFRIGGER--MPLPLVHALGVVKRAAAETNIALGKLDPVLGQVIAVAASEVIEGKLDDHFPLVVWQTGSGTQSNMNANEVISNRAIELLGGEMGSKKPIHPNDHVNMSQSSNDSFPTAIHIATAVETVNRLYPALEHLTKALKVK 174
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_BRUME (Fumarate hydratase class II OS=Brucella melitensis GN=fumC PE=3 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 4.651e-44 Identity = 94/149 (63.09%), Postives = 113/149 (75.84%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSK 441 RSLQNF IGGER MP P+V A G++K+ AA+ N+ G LDP +G+ I AA EV EGKL+DHFPLVVWQTGSGTQSNMNANEVI+NRA E+LG + G +K +HPNDHVN SQSSND+FPT +HIA A +RL P L+ L +L K Sbjct: 28 RSLQNFRIGGER--MPLPLVHALGVVKRAAAETNIALGKLDPVLGQVIAVAASEVIEGKLDDHFPLVVWQTGSGTQSNMNANEVISNRAIELLGGEMGSKKPIHPNDHVNMSQSSNDSFPTAIHIATAVETVNRLYPALEHLTKALKVK 174 The following BLAST results are available for this feature:
BLAST of FC932230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932230 ID=FC932230; Name=FC932230; organism=Citrus clementina; type=EST; length=446bpback to top |