FC932230
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: FUMC_SULSO (Fumarate hydratase class II OS=Sulfolobus solfataricus GN=fumC PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.077e-24 Identity = 64/136 (47.06%), Postives = 87/136 (63.97%), Query Frame = 1 Query: 40 RMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSKS 444 + P I+ + G+LKK AKVN + GL D I +I++A+ ++ +GKL+D L V+QTGSGT NMN NEVIA A+ K VHPNDHVN QSSNDT PT + IAA +RL+P L+ + +SL+ K+ Sbjct: 17 KFPRRIIWSMGVLKKSCAKVNADLGLLDKKIADSIIKASDDLIDGKLDDKIVLDVFQTGSGTGLNMNVNEVIAEVASSYSNLK-----VHPNDHVNFGQSSNDTVPTAIRIAAVAEVTNRLLPALQQIISSLNKKA 147
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: ASPA_HAEIN (Aspartate ammonia-lyase OS=Haemophilus influenzae GN=aspA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 6.982e-24 Identity = 65/151 (43.05%), Postives = 91/151 (60.26%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPA-IGKAIMQAAQEV-AEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSKS 444 R+++NF+I VR ++KK A N E G P+ I KAI+ A E+ GK D FP V+Q G+GT NMN NEV+AN A E +GHK+GE +++P DHVN SQS+ND +PT IA N + +LI ++ LH+S +K+ Sbjct: 31 RAVENFNISNVTISDVPEFVRGMVMVKKATALANGELGAIPSDIAKAIVAACDEILTTGKCLDQFPSDVYQGGAGTSVNMNTNEVVANLALEKIGHKKGEYNVINPMDHVNASQSTNDAYPTGFRIAVYN-SILKLIDKIQYLHDSFDNKA 180
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: ASPA_HELPJ (Aspartate ammonia-lyase OS=Helicobacter pylori J99 GN=aspA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.246e-22 Identity = 60/150 (40.00%), Postives = 90/150 (60.00%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSKS 444 R+ +NF I ++ +++F +KK AA N + GL D + AI A + +GK +D F + + Q G+GT +NMN NEVIAN A E +GH++GE + HPNDHVNRSQS+ND +P+ + IA S L+ +K L ++ K+ Sbjct: 25 RASENFFITNDKLCSYPVFIKSFAQVKKAAALANAQLGLIDEKLKIAICHACDLLVDGKYHDQFIVDMIQGGAGTSTNMNMNEVIANLALEYMGHQKGEYQFCHPNDHVNRSQSTNDAYPSALKIAIYE-RLSNLVAPMKALRDAFAQKA 173
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: ASPA_HELPY (Aspartate ammonia-lyase OS=Helicobacter pylori GN=aspA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.004e-22 Identity = 59/150 (39.33%), Postives = 90/150 (60.00%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSKS 444 R+ +NF I ++ +++F +KK A N++ GL D + AI A + +GK +D F + + Q G+GT +NMN NEVIAN A E +GH++GE + HPNDHVNRSQS+ND +P+ + IA S L+ +K L ++ K+ Sbjct: 25 RASENFFITNDKLCSYPVFIKSFAQVKKAATLANVQLGLIDEKLKIAICHACDLLIDGKYHDQFIVDMIQGGAGTSTNMNMNEVIANLALEYMGHQKGEYQFCHPNDHVNRSQSTNDAYPSALKIAIYE-RLSNLVAPMKALRDAFAQKA 173
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: ASPA_SERMA (Aspartate ammonia-lyase OS=Serratia marcescens GN=aspA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.456e-21 Identity = 60/151 (39.74%), Postives = 87/151 (57.62%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPA-IGKAIMQAAQEVAE-GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRLIPNLKVLHNSLHSKS 444 R+++NF I + VR ++KK AA N E P I I+QA EV + GK D FP+ V+Q G+GT NMN NEV+AN E++GH++GE + ++PNDH+N+ QS+ND +PT I A +N +LI + L K+ Sbjct: 29 RAIENFYISNSKISDVPEFVRGMVMVKKAAAMANKELKTIPRKIADVIIQACDEVLDKGKCMDQFPVDVFQGGAGTSLNMNTNEVLANIGLELMGHQKGEYQYLNPNDHLNKCQSTNDAYPTGFRI-AVYASNQKLIDAINQLREGFDRKA 178
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: ASPA_SHIFL (Aspartate ammonia-lyase OS=Shigella flexneri GN=aspA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 9.437e-21 Identity = 55/127 (43.31%), Postives = 78/127 (61.42%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDP-AIGKAIMQAAQEVAE-GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIA 372 R+++NF I + VR ++KK AA N E P ++ AI+ A EV GK D FP+ V+Q G+GT NMN NEV+AN E++GH++GE + ++PNDHVN+ QS+ND +PT IA Sbjct: 29 RAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIA 155
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: ASPA_ECOLI (Aspartate ammonia-lyase OS=Escherichia coli (strain K12) GN=aspA PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 9.437e-21 Identity = 55/127 (43.31%), Postives = 78/127 (61.42%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDP-AIGKAIMQAAQEVAE-GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIA 372 R+++NF I + VR ++KK AA N E P ++ AI+ A EV GK D FP+ V+Q G+GT NMN NEV+AN E++GH++GE + ++PNDHVN+ QS+ND +PT IA Sbjct: 29 RAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIA 155
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: ASPA_ECOL6 (Aspartate ammonia-lyase OS=Escherichia coli O6 GN=aspA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 9.437e-21 Identity = 55/127 (43.31%), Postives = 78/127 (61.42%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDP-AIGKAIMQAAQEVAE-GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIA 372 R+++NF I + VR ++KK AA N E P ++ AI+ A EV GK D FP+ V+Q G+GT NMN NEV+AN E++GH++GE + ++PNDHVN+ QS+ND +PT IA Sbjct: 29 RAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIA 155
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: ASPA_ECO57 (Aspartate ammonia-lyase OS=Escherichia coli O157:H7 GN=aspA PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 9.437e-21 Identity = 55/127 (43.31%), Postives = 78/127 (61.42%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDP-AIGKAIMQAAQEVAE-GKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIA 372 R+++NF I + VR ++KK AA N E P ++ AI+ A EV GK D FP+ V+Q G+GT NMN NEV+AN E++GH++GE + ++PNDHVN+ QS+ND +PT IA Sbjct: 29 RAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIA 155
BLAST of FC932230 vs. ExPASy Swiss-Prot
Match: ASPA_PSEAE (Aspartate ammonia-lyase OS=Pseudomonas aeruginosa GN=aspA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.477e-18 Identity = 51/135 (37.78%), Postives = 79/135 (58.52%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGE-KIVHPNDHVNRSQSSNDTFPTVMHIAAANGNNSRL 399 R++ NF + G +V A ++K+ AA N + G L AI +A + G ++ F + + Q G+GT +NMNANEVIAN A E +GH +GE K +HPN+ VN +QS+ND +PT + + G+++ L Sbjct: 31 RAVNNFRLSGVPLSHYPKLVVALAMVKQAAADANRQLGHLPEDKHAAISEACARLIRGDFHEQFVVDMIQGGAGTSTNMNANEVIANIALEAMGHTKGEYKYLHPNNDVNMAQSTNDAYPTAIRLGLLLGHDTLL 165 The following BLAST results are available for this feature:
BLAST of FC932230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932230 ID=FC932230; Name=FC932230; organism=Citrus clementina; type=EST; length=446bpback to top |