FC932234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932234 vs. ExPASy Swiss-Prot
Match: IF6_PYRHO (Translation initiation factor 6 OS=Pyrococcus horikoshii GN=eif6 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.545e-27 Identity = 73/194 (37.63%), Postives = 104/194 (53.61%), Query Frame = 2 Query: 125 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI---EERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIG 697 RL FENS +GVF T+ L+ G E L +PV++ S+ +RIIG L GN N ++LP D E++ ++ +L + + + + +ALGN I ND AL R+ + I ++LGVEV R IAG VGS +N+GGLVHP TS E+L+ LS L +V + GT N G +G Sbjct: 5 RLDFENSPYLGVFGVATDRVVLIREGLQEKKLEVIRETLK--VPVIEVSVMKSRIIGTLATGNSNAIILPWYVWDAEIERIKKALSEYGIDMEVVPFRSKYTALGNLILTNDKAALVSAKFSRKEAQEIGEILGVEVERGVIAGLHAVGSAGVVTNKGGLVHPETSDEELEWLSDLFKVDVYVGTANMGVPYVG 196
BLAST of FC932234 vs. ExPASy Swiss-Prot
Match: IF6_PYRFU (Translation initiation factor 6 OS=Pyrococcus furiosus GN=eif6 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.487e-26 Identity = 74/195 (37.95%), Postives = 107/195 (54.87%), Query Frame = 2 Query: 125 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVV---VQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGA 700 +L FENS +GVF T+ L+ G E L +PVV+ S+ +RIIG L GN N +++P D EL+ ++N+ + + V + + +ALGN I ND AL + RE + I D+LGVEV R IAG + VGS +N+GGLVHP + E+L+ LS L +V + GT N G +G+ Sbjct: 5 KLDFENSPYLGVFGIATDKVVLIREGLQEKKLEVIREVLK--VPVVEASLMKSRIIGVLGAGNSNAIIVPWYVWDSELEKIKNAFREYGIDTEVVPFQTKYTALGNLILTNDKGALVSSKFSREEAKKIGDILGVEVERGVIAGIVAVGSAGVVTNKGGLVHPEATDEELEWLSDLFKVDVYVGTANMGVPYVGS 197
BLAST of FC932234 vs. ExPASy Swiss-Prot
Match: IF6_PYRAB (Translation initiation factor 6 OS=Pyrococcus abyssi GN=eif6 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.487e-26 Identity = 75/194 (38.66%), Postives = 103/194 (53.09%), Query Frame = 2 Query: 125 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI---EERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIG 697 RL FENS +GVF T+ LV G E L +PV++ SI +RIIG L GN N +L+P D E++ ++++ + + I + +ALGN I ND AL R+ + I D+LGVEV R IAG VGS +N+GGLVHP S E+L+ LS L +V + GT N G +G Sbjct: 5 RLDFENSPYLGVFGVATDRVVLVREGLQEKKLEVIREVLK--VPVIEASIMKSRIIGTLATGNSNAILVPWYVWDTEIERIKSAFKEYGIETEIVPFRTKYTALGNLILTNDKAALVSAKFSRDEAKEIGDILGVEVERGLIAGLHAVGSAGVVTNKGGLVHPEASDEELEWLSELFKVDVYVGTANMGVPYVG 196
BLAST of FC932234 vs. ExPASy Swiss-Prot
Match: IF6_THEON (Translation initiation factor 6 OS=Thermococcus onnurineus (strain NA1) GN=eif6 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26 Identity = 72/195 (36.92%), Postives = 103/195 (52.82%), Query Frame = 2 Query: 125 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIE---ERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGA 700 +L FENS +GV+ T+ L+ G E L +P+++TSI +RI+G GN N +++P D EL+H++N L + + RIE L+A GN I ND AL RE + + D+LGVEV R I VGS +NRGGLVHP + E+L+ L L +V + GT N G +G+ Sbjct: 5 KLDFENSPYLGVYGTATDRVALIREGLGEKKLEVLREVLK--VPLIETSIMKSRIVGVFAAGNSNAIVVPWYIWDAELEHIQNELNELDIDMRIEPFQSTLTAFGNLILANDKAALISVKFTREEAKKLEDILGVEVERGMIGDYHAVGSVGVVTNRGGLVHPEATDEELEWLRDLFKVDIYVGTANMGVPFVGS 197
BLAST of FC932234 vs. ExPASy Swiss-Prot
Match: IF6_METST (Translation initiation factor 6 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=eif6 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25 Identity = 70/195 (35.90%), Postives = 108/195 (55.38%), Query Frame = 2 Query: 116 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGA 700 M + + + +GV + +V+ G +S+ + + L +P++KT I G+ + G L GN NGLL+ EL LR + V+ + ++L+A+GN I ND+ AL + L E + II + L VEV +IAG +VGS + +NRG LVHP S E+LD + +L VP GTVNRG +++GA Sbjct: 1 MIQKFDIDGNPNLGVSILAKDNVAIVSPGLQDSYLKSIKETLN--VPIIKTPICGSNLAGALMAGNSNGLLISPYVFSHELDVLREH---DINVEIMPDKLTAIGNIIVANDNGALVNPSLSDEAKRIIKNTLEVEVVETSIAGLDIVGSLVAATNRGALVHPDASEEELDLVEDVLGVPAEIGTVNRGVKLVGA 190
BLAST of FC932234 vs. ExPASy Swiss-Prot
Match: IF6_THEGJ (Translation initiation factor 6 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=eif6 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25 Identity = 71/195 (36.41%), Postives = 102/195 (52.31%), Query Frame = 2 Query: 125 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI---EERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGA 700 RL FENS +GV+ T+ ++ G E +T L +P+++TS+ +RI+G GN N L++P D EL + L + + + + RL+A GN I ND AL D RE I D+LGV V R IA VGS +N+GGLVHP + E+L+ LS L +V + GT N G +G+ Sbjct: 5 RLDFENSPYLGVYGFATDRVAVIREGLGEKKLATLREVLK--VPLIETSVMKSRIVGIFVAGNSNALIVPWYIWDAELDFINAQLREYGIDMEVVPFQSRLTAFGNLILANDKGALVSKDFTREEARKIEDILGVPVERGVIADYTAVGSVGVVTNKGGLVHPEATDEELEWLSDLFKVDVYVGTANMGVPFVGS 197
BLAST of FC932234 vs. ExPASy Swiss-Prot
Match: IF6_PYRKO (Translation initiation factor 6 OS=Pyrococcus kodakaraensis GN=eif6 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 72/196 (36.73%), Postives = 105/196 (53.57%), Query Frame = 2 Query: 125 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPD---QVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGV-EVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGA 700 RL FENS +GV+ + T+ L+ G E L +P+++TSI +RI+G GN N +++P D EL+ ++ +L + + V + RL+ALGN I ND AL + RE I ++LGV EV R IA VGS +N+GGLVHP + E+L+ LS L V + GT N G +G+ Sbjct: 5 RLDFENSPYLGVYGRATDRVLLLREGLGEKKLEVLREVLK--VPIIETSIMKSRIVGIFAAGNSNAIIVPWYIWDAELERIKTALNEFGIDMDVVPFKSRLTALGNLILTNDKAALVSKEFTREEANAIGEILGVDEVERGMIASYRSVGSVGVVTNKGGLVHPEATDEELEWLSDLFGVDIYVGTANMGVPFVGS 198
BLAST of FC932234 vs. ExPASy Swiss-Prot
Match: IF6_AERPE (Translation initiation factor 6 OS=Aeropyrum pernix GN=eif6 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24 Identity = 70/195 (35.90%), Postives = 108/195 (55.38%), Query Frame = 2 Query: 125 RLMFENSCEVGVFSKLTNAFCLVAIG-GSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGL 706 +L + +GV+ ++++ L G++ + E + VV+ + G R++G L GN G+LLP D+E++ +R +L + V V + R +ALGN I CND LA L++E + ++D LGVEV ++AG VGS +NRGGL HP S E+L LS + +VP AGT+N G E + GL Sbjct: 11 KLSLYGNPNIGVYLTASDSYVLAPDDIGADDVRTISEVLGVAMERVVRLRVLGMRLVGVLTTGNSRGILLPEGV-DREVELVRKAL-EGVEVGIVPTRSNALGNVIVCNDRACLASPGLEKEALKTVSDTLGVEVVEGSVAGVYTVGSAIVVTNRGGLAHPDASEEELKFLSDVFKVPFEAGTINFGVEFVRTGL 203
BLAST of FC932234 vs. ExPASy Swiss-Prot
Match: IF6_METMA (Translation initiation factor 6 OS=Methanosarcina mazei GN=eif6 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.574e-23 Identity = 67/185 (36.22%), Postives = 103/185 (55.68%), Query Frame = 2 Query: 152 VGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGL 706 +GVF+ T LV + E L + VV+T I G+ ++G L GN NG LLP+ ++ +E+Q R +P + + +RL+A+GN + ND AL H +L EIIA L VEV+R TIAG VG +N+G LVHP ++ + + L + +P+ GT N G++++G+GL Sbjct: 13 IGVFATCTEDLALVPPLTKPEVCTILEEALD--VRVVETLINGSTVVGALSRGNSNGFLLPYGSSVEEMQK-RTGVPAGI----LPDRLNAVGNIVLANDSAALVHPELSDRALEIIARTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTVSEREALEEIFGLPVNIGTTNFGTQMLGSGL 190
BLAST of FC932234 vs. ExPASy Swiss-Prot
Match: IF6_METBU (Translation initiation factor 6 OS=Methanococcoides burtonii (strain DSM 6242) GN=eif6 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.668e-22 Identity = 64/185 (34.59%), Postives = 100/185 (54.05%), Query Frame = 2 Query: 152 VGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGL 706 +GVF+ T +V IG + +L + V+ T I G+ ++G L GN NG L+ +L+ + +V V+ + + L+A+GN I ND AL H ++ + E+I+ VLGV+V R TIAG VG +NRG LVHP + ++L L + +P+ GT N GS+ +G+GL Sbjct: 13 LGVFATCTEDVAIVPIGTAGKAIDLLAEQLD--VKVISTLINGSIVVGSLSKGNSNGFLISRDANVSDLKDV------EVPVEVLPDMLTAVGNVILANDTAALVHPEMTDSSIEVISRVLGVDVHRGTIAGLGTVGMAGVVTNRGLLVHPMVTPDELSVLEDVFALPIELGTTNYGSQAVGSGL 189 The following BLAST results are available for this feature:
BLAST of FC932234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932234 ID=FC932234; Name=FC932234; organism=Citrus clementina; type=EST; length=708bpback to top |