FC932235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932235 vs. ExPASy Swiss-Prot
Match: HPPD_HUMAN (4-hydroxyphenylpyruvate dioxygenase OS=Homo sapiens GN=HPD PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 8.403e-21 Identity = 72/190 (37.89%), Postives = 98/190 (51.58%), Query Frame = 1 Query: 124 HGLAARSIAVEVEDADVAFNTSVAHGAKPSSPP-VILDNLAVI--AEVQLYGDVVLRYVSYKDKANHL-DFLPGFEPT---DEISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSRIQTYLEHNEGAGVQHLALVSEDI 666 HG + IA EVED D + GAK P V D + A +Q YGD V +K N++ FLPG+E D + + +DH VGN P E+ A + FH F V T S L S+V+AN +E + +P+NEP G K+KS+IQ Y+++N GAGVQH+AL +EDI Sbjct: 89 HGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLV---EKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPG-KKKSQIQEYVDYNGGAGVQHIALKTEDI 274
BLAST of FC932235 vs. ExPASy Swiss-Prot
Match: HPPD_RAT (4-hydroxyphenylpyruvate dioxygenase OS=Rattus norvegicus GN=Hpd PE=1 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 1.433e-20 Identity = 73/193 (37.82%), Postives = 100/193 (51.81%), Query Frame = 1 Query: 124 HGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNL---AVIAEVQLYGDVVLRYVSYKDKANHLD-FLPGFE-PTDEISSFPL--DYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSRIQTYLEHNEGAGVQHLALVSEDIFRT 675 HG + IA EVED + + GAK P + ++ A +Q YGD V +K N+ FLPGFE PT + + P + +DH VGN P E+ A + FH F V T S L S+V+AN +E + +P+NEP G K KS+IQ Y+++N GAGVQH+AL +EDI T Sbjct: 89 HGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLV---EKINYTGRFLPGFEAPTYKDTLLPKLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRK-KSQIQEYVDYNGGAGVQHIALRTEDIITT 277
BLAST of FC932235 vs. ExPASy Swiss-Prot
Match: HPPD_MOUSE (4-hydroxyphenylpyruvate dioxygenase OS=Mus musculus GN=Hpd PE=1 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 7.114e-20 Identity = 74/190 (38.95%), Postives = 98/190 (51.58%), Query Frame = 1 Query: 124 HGLAARSIAVEVEDADVAFNTSVAHGAKPSSPP-VILDNLAVI--AEVQLYGDVVLRYVSYKDKANHLD-FLPGFE-PTDEISSFPL--DYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSRIQTYLEHNEGAGVQHLALVSEDI 666 HG + IA EVED D + GAK P V D + A +Q YGD V +K N+ FLPGFE PT + + P + +DH VGN P E+ A + FH F V T S L S+V+ N +E + +P+NEP G K KS+IQ Y+++N GAGVQH+AL +EDI Sbjct: 89 HGDGVKDIAFEVEDCDHIVQKARERGAKIVREPWVEQDKFGKVKFAVLQTYGDTTHTLV---EKINYTGRFLPGFEAPTYKDTLLPKLPRCNLEIIDHIVGNQPDQEMQSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVTNYEESIKMPINEPAPGRK-KSQIQEYVDYNGGAGVQHIALKTEDI 274
BLAST of FC932235 vs. ExPASy Swiss-Prot
Match: HPPD_STRCO (4-hydroxyphenylpyruvate dioxygenase OS=Streptomyces coelicolor GN=hpd PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.022e-19 Identity = 64/191 (33.51%), Postives = 93/191 (48.69%), Query Frame = 1 Query: 118 ASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDN---LAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSRIQTYLEHNEGAGVQHLALVSEDIFRT 675 A HG +A+EV DA A +V HGA+ + P + + V+A + YG+ R+ + +LPG+ + + P + +DH VGNV + V + GF EF +D+ T S L S V+A+ V P+NEP K+KS+I YLE GAGVQH+AL + DI T Sbjct: 94 AEHGDGVVDLAIEVPDARAAHAYAVEHGARSLAEPHEVKDEHGTVVLAAIATYGET--RHTLVERTGYDGPYLPGYVAAKPMVAPPAQRVFQAVDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPAI-AKKKSQIDEYLEFYGGAGVQHIALNTNDIVAT 281
BLAST of FC932235 vs. ExPASy Swiss-Prot
Match: HPPD_STRAW (4-hydroxyphenylpyruvate dioxygenase OS=Streptomyces avermitilis GN=hpd PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 6.022e-19 Identity = 65/191 (34.03%), Postives = 90/191 (47.12%), Query Frame = 1 Query: 118 ASHGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDN---LAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPTDEISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSRIQTYLEHNEGAGVQHLALVSEDIFRT 675 A HG +A+EV DA A ++ HGA+ + P L + V+A + YG R+ +LPG+ I P + +DH VGNV + V + GF EF +D+ T S L S V+A+ V P+NEP K+KS+I YLE GAGVQH+AL + DI T Sbjct: 94 AEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKT--RHTLVDRTGYDGPYLPGYVAAAPIVEPPAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPAL-AKKKSQIDEYLEFYGGAGVQHIALNTGDIVET 281
BLAST of FC932235 vs. ExPASy Swiss-Prot
Match: HPPD_XENTR (4-hydroxyphenylpyruvate dioxygenase OS=Xenopus tropicalis GN=hpd PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 66/191 (34.55%), Postives = 98/191 (51.31%), Query Frame = 1 Query: 124 HGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDN---LAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGF-EPTDEISSFP-LDYG-IRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSRIQTYLEHNEGAGVQHLALVSEDIFR 672 HG + +A +VED D F + HGA P I ++ A +Q YGD + Y + FLPG+ EP P L G + +DH VGN P E+ P V + + FH F + + T S L S+V+ N +E + +P+NEP G K+KS+IQ Y+++ AGVQH+AL + +I + Sbjct: 89 HGDGVKDVAFQVEDCDFLFQKAKDHGAVVVREPWIEEDEGGKVKYAVLQTYGDTTHTLLEYLGPYRGV-FLPGYKEPLFRDPLLPTLPSGCLSFIDHIVGNQPDNEMVPIVEWYQKCLLFHRFWSVDDKQIHTEYSSLRSIVVTNYEETIKMPINEPAAG-KKKSQIQEYVDYYGSAGVQHIALNTSNIIK 277
BLAST of FC932235 vs. ExPASy Swiss-Prot
Match: HPPD_MYCGR (4-hydroxyphenylpyruvate dioxygenase OS=Mycosphaerella graminicola GN=HPPD PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.027e-18 Identity = 61/189 (32.28%), Postives = 99/189 (52.38%), Query Frame = 1 Query: 124 HGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVI--LDNLAVI-AEVQLYGDVVLRYVSYKDKANHLDFLPGFEP---TDEISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSRIQTYLEHNEGAGVQHLALVSEDI 666 HG + +A EV+D + +VA+GA+ S P D VI A ++ YGD ++ FLPG+ D + F + +DH VGN E++ A + + GFH F +D+ T S L S+V+++ +++V +P+NEP G K+KS+I+ Y++ G GVQH+AL + +I Sbjct: 127 HGDGVKDVAFEVDDVLAVYENAVANGAESVSSPHTDSCDEGDVISAAIKTYGDTTHTFIQRTTYTG--PFLPGYRSCTTVDSANKFLPPVNLEAIDHCVGNQDWDEMSDACDFYERCLGFHRFWSVDDKDICTEFSALKSIVMSSPNQVVKMPINEPAHG-KKKSQIEEYVDFYNGPGVQHIALRTPNI 312
BLAST of FC932235 vs. ExPASy Swiss-Prot
Match: HPPD_DANRE (4-hydroxyphenylpyruvate dioxygenase OS=Danio rerio GN=hpd PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.027e-18 Identity = 66/191 (34.55%), Postives = 95/191 (49.74%), Query Frame = 1 Query: 124 HGLAARSIAVEVEDADVAFNTSVAHGAKPSSPPVILDNLA---VIAEVQLYGDVVLRYVSYKDKANHLDFLPGF-EPTDEISSFP-LDYG-IRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSRIQTYLEHNEGAGVQHLALVSEDIFR 672 HG + +A VED D + GA P + + A VQ YGD +V Y L FLPG+ EP P L G + +DH VGN P E+ P + + FH F + + T S L S+V+ N +E + +P+NEP G K+KS+IQ Y+++N G GVQH+AL + +I + Sbjct: 89 HGDGVKDVAFLVEDCDFLVKKAKERGAAVLKEPWVEQDAGGKVKYAIVQTYGDTTHTFVEYLGPYKGL-FLPGYKEPLFRDPLLPKLPSGHLSFIDHIVGNQPDDEMVPVSDWYQKCLLFHRFWSIDDKQIHTEYSALRSIVVTNYEETIKMPINEPAMG-KKKSQIQEYIDYNGGPGVQHIALNTSNIIQ 277
BLAST of FC932235 vs. ExPASy Swiss-Prot
Match: HPPD_DICDI (4-hydroxyphenylpyruvate dioxygenase OS=Dictyostelium discoideum GN=hpd PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.483e-17 Identity = 63/191 (32.98%), Postives = 98/191 (51.31%), Query Frame = 1 Query: 124 HGLAARSIAVEVEDADVAFNTSVAHGAKP-SSPPVILDNLAVIAEVQL---YGDVVLRYVSYKDKANHLD-FLPGFE---PTDEISSFPLDYGIRRLDHAVGNVPE--LAPAVAYVKSFTGFHEFAEFTAEDVGTSESGLNSVVLANNDEMVLLPMNEPVFGTKRKSRIQTYLEHNEGAGVQHLALVSEDI 666 HG + IA V+D ++ +V GA+ P I D ++ + YG+ +V D++ + FLPGF +D +S+ G+ +DH V N + + P V + + FH F + + T S L SVV+A+ E V LP+NEP G RKS+IQ Y++ GAGVQH+AL +++I Sbjct: 74 HGDGVKDIAFNVKDVQHIYDEAVKAGAQSVKEPHQIKDEHGIVTLATIMSPYGETTHTFV---DRSQYKGAFLPGFTYKVASDPLSNITEPVGLNLIDHVVSNHADKMMEPVVQWYEKVLQFHRFWSVDDKTIHTEYSSLRSVVVADKSEKVKLPINEPANGI-RKSQIQEYVDFYNGAGVQHIALKTDNI 260
BLAST of FC932235 vs. ExPASy Swiss-Prot
Match: HPPD2_ASPFU (Probable 4-hydroxyphenylpyruvate dioxygenase 2 OS=Aspergillus fumigatus GN=AFUA_4G10620 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.937e-17 Identity = 61/193 (31.61%), Postives = 99/193 (51.30%), Query Frame = 1 Query: 124 HGLAARSIAVEVE-DADVAFNTSVAHGAKPSSPPVILDN----LAVIAEVQLYGDVVLRYVSYKDKANHLDFLPGFEPT---DEISSFPLDYGIRRLDHAVGNVP--ELAPAVAYVKSFTGFHEFAEFTAEDVGT--SESGLNSVVLANNDEMVLLPMNEPVFGTKRKSRIQTYLEHNEGAGVQHLALVSEDI 666 HG + +A +E D + + +V HGA P + P L + +A + Y D V ++ D + FLPG+E D I+ +DH VGN P + P V Y + FH + +T +D+ S + S+V+A+ +E++ +PMNEP G K+KS+I+ ++ + GAGVQH+A + DI Sbjct: 112 HGDGVKDVAFRIEGDIEAVWKRAVDHGAAPVAAPTTLKDDRHGSITLATIGTYEDTVHSLINRHDYSG--PFLPGYEVVTDDDPINRLLPSIDFIEIDHCVGNQPWNGVDPIVKYYEDCLNFHRY--WTVDDLNMCGEYSAMRSIVVASPNEVIKMPMNEPAQG-KKKSQIEEFVNYYNGAGVQHIAFRTHDI 299 The following BLAST results are available for this feature:
BLAST of FC932235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932235 ID=FC932235; Name=FC932235; organism=Citrus clementina; type=EST; length=675bpback to top |