FC932241

Overview
NameFC932241
Unique NameFC932241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_KLULA (NADH-cytochrome b5 reductase 2 OS=Kluyveromyces lactis GN=MCR1 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21
Identity = 53/168 (31.55%), Postives = 85/168 (50.60%), Query Frame = 3
Query:  153 YLYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            Y   +   K  L    + +  ++K  +LSH+  +FTF LP    V GL     I  +    +G  VI+PYTP + +   G  ELV+K Y  G+ + H   ++  D ++ KGP  ++ ++P    +  +   G+GI P++Q+   I E  +  TK+HL Y N T  DIL
Sbjct:   33 YSIMNDTSKAFLGDNEWIDLPIIKIEKLSHDTKRFTFALPKKDQVSGLITASCILAKFVTPKGSNVIRPYTPVSDNGTKGKMELVVKHYENGKFTSHLFGLKENDTVSFKGPITKWEWKPNSYDSITLLGAGTGINPLYQLVHHIAENPEDNTKIHLYYGNKTPEDIL 200          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA_CICIN (Nitrate reductase [NADH] OS=Cichorium intybus GN=NIA PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.043e-20
Identity = 59/168 (35.12%), Postives = 90/168 (53.57%), Query Frame = 3
Query:  213 KLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHI-SCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            KL+ +  +SH+V  F F LP+P  VLGLP+G+H+  C   D   +  ++ YTPT+   +VG+FEL++K+Y +         G MS H   M +G  + +KGP G   Y          +    R   M AGG+GITP      + L+  +  T+++++YAN T  DIL
Sbjct:  669 KLISKTSVSHDVRLFRFALPSPDQVLGLPVGKHVFVCATIDD--KLCMRAYTPTSTIDEVGYFELLVKIYFKGVEPKFPNGGLMSQHLESMELGSSIEIKGPLGHIEYMGRGTFSVHGKQKFARKLAMFAGGTGITPDLSSDASYLKDPEDDTEMYVVYANRTEDDIL 834          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_MAGGR (NADH-cytochrome b5 reductase 2 OS=Magnaporthe grisea GN=MCR1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.043e-20
Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 3
Query:  171 KPKVSLDPEN-FKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +PK +L+ E  F   +L     ++HN  +  F+LP    V GL +   +  + K    E+ V++PYTP + +   G+ +L++K Y  G MS H  E+  G  L  KGP  ++ +   +     M AGG+GITPM+Q+ RAI +    +TKV L+  N+T  DIL
Sbjct:   71 EPKKALEMEKGFVSLQLDDVEVVNHNTKRLRFKLPEDDMVSGLHVASALLTKFKPEGAEKPVLRPYTPISDEDQKGYLDLIVKKYEGGPMSTHIHELVPGQKLDFKGPLPKYEWSANKHPHVAMIAGGTGITPMYQIMRAIFKNPADKTKVTLVVGNITEEDIL 234          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_NEUCR (NADH-cytochrome b5 reductase 2 OS=Neurospora crassa GN=mcr-1 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.324e-20
Identity = 52/155 (33.55%), Postives = 87/155 (56.13%), Query Frame = 3
Query:  195 ENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            + +   KL +   ++HN  +  F LP    V GL +   I  + K    E+ V++PYTP + +S  G+ +L++K Y  G MS +  +M  G  L +KGP  ++ ++  + +   + AGG+GITPM+Q+ RAI      +TKV L++ NV+  D+L
Sbjct:   92 QGWLSLKLEEVELVNHNTKRLRFRLPEDDMVSGLHVASAILTKFKPIDAEKAVLRPYTPISDESAQGYIDLLVKKYEGGPMSTYLHDMAPGQRLDIKGPLPKYPWEANKHKHIALVAGGTGITPMYQLIRAIFNNPDDKTKVTLVFGNVSEEDVL 246          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1B_VANPO (NADH-cytochrome b5 reductase 2-B OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=MCR1B PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.761e-20
Identity = 59/174 (33.91%), Postives = 88/174 (50.57%), Query Frame = 3
Query:  165 SKKPKVSLDPENFKEFK----------LVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            S+    +L  + FK FK          LVK   LSH+  KFTF+LP    V G+     +  R   +     I+PYTP +L    G  E VIK  P G MS H   ++  D ++  GP  ++ ++  +  +  +   GSGITP++Q+  +IL   + +TK++L YAN T  DIL
Sbjct:   33 SRLANEALHNKTFKGFKGPASTWVDLPLVKFEDLSHDTRKFTFKLPNDDDVSGISPLSFLLARPHGTWSLRGIRPYTPVSLPETQGVIEFVIKHVPNGGMSSHMFSLKPNDTVSFTGPIVKYEWKQNKFDSVTLLGAGSGITPLYQLMGSILSNPEDKTKINLFYANKTSDDIL 206          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA_EMENI (Nitrate reductase [NADPH] OS=Emericella nidulans GN=niaD PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.153e-19
Identity = 61/185 (32.97%), Postives = 96/185 (51.89%), Query Frame = 3
Query:  162 SSKKPKVS-LDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKD---SQGEEVIKPYTPTTLDSDVGHFELVIKMY------PQGRMSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            SS  P+ + L P+ + +  L K+  +S +   FT  L  P+  LGLP GQH+  +  D   S    +I+ YTP +    +G  +++IK+Y      P G+M+     + +G  +  KGP GRF Y          +   V++F M  GG+GITP+FQV RA+++  Q +TK  ++  N    DIL
Sbjct:  604 SSSDPRPTFLTPKAWTKATLTKKTSVSSDTHIFTLSLEHPSQALGLPTGQHLMLKTPDPKSSSSGSIIRSYTPISPSDQLGMVDILIKIYAETPSIPGGKMTTALDTLPLGSVIECKGPTGRFEYLDRGRVLISGKERFVKSFVMICGGTGITPVFQVLRAVMQDEQDETKCVMLDGNRLEEDIL 788          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA_ASPNG (Nitrate reductase [NADPH] OS=Aspergillus niger GN=niaD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.475e-19
Identity = 60/182 (32.97%), Postives = 96/182 (52.75%), Query Frame = 3
Query:  165 SKKPKVS-LDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMY------PQGRMSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            S +P+ + L  +++ +  LVKR  +S +   FTF+L      LGLPIGQH+  +  D   +E +I+ YTP +  +  G  +L++K+Y        G+M+    ++ +G  +  KGP GRF Y          +   V +F M  GG+GITP+FQV RA+++  Q  T   ++  N    DIL
Sbjct:  604 SDEPRATFLQSKSWTKATLVKRTDVSWDTRIFTFQLQHDKQTLGLPIGQHLMIKVADPTSKEAIIRSYTPISDTNQEGTMDLLVKIYFDTPTVKGGKMTMALEKLALGSEIDCKGPTGRFEYLGNGKILVSGKERHVSSFKMICGGTGITPIFQVLRAVMQDKQDPTSCVVLDGNRQEEDIL 785          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA_PHYIN (Nitrate reductase [NADPH] OS=Phytophthora infestans GN=NIAA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.710e-18
Identity = 61/168 (36.31%), Postives = 85/168 (50.60%), Query Frame = 3
Query:  216 LVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTL--DSDVGHFELVIKMY--------PQGRM-SHHFREMRVGDYLAVKGPKGRFRYQPG----------QVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            L+ R  +SH+   F F LP     LGLPIG H+    K + G+  ++ YTP +   D D G    +IK+Y        P+G + S +   + +G  + +KGP G F Y                 FG  AGG+GITP++QV RAILE  + QTKV LIY   +  D+L
Sbjct:  644 LISREVVSHDARIFKFALPAKDLRLGLPIGNHVFLYAKIN-GKTAVRAYTPISSENDEDRGFVSFLIKVYFAGDNPVHPEGGLFSQYLDGLHLGQQIQIKGPLGHFTYYGDGNFSLETTNFHAYKFGFVAGGTGITPVYQVMRAILEDAKDQTKVALIYCVRSQRDLL 810          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA_LEPMC (Nitrate reductase [NADPH] OS=Leptosphaeria maculans GN=NIAD PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.036e-16
Identity = 59/182 (32.42%), Postives = 93/182 (51.10%), Query Frame = 3
Query:  162 SSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQ------GRMSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            SS +P   LD   + +  L  + ++S +   F F+L   +  LGLP GQH+  R +D    E +I+ YTP +  S+ G  +++IK+Y        G+M+     +  G ++ +KGP G+F Y             +VR+  M  GGSGITP++QV RAIL+ +   T   ++  N    DIL
Sbjct:  631 SSLRPTF-LDSRTWSKALLSSKTKVSWDTRIFRFKLDHASQTLGLPTGQHLMIRLRDPVTREAIIRSYTPISQISEQGFCDVLIKIYADAPGREGGKMTKALDSIPCGHWVDMKGPIGKFEYLGKGVCSINGNERRVRSMKMICGGSGITPIYQVLRAILQDSADSTHCTVLNGNRLEEDIL 811          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA_FUSOX (Nitrate reductase [NADPH] OS=Fusarium oxysporum GN=NIA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.036e-16
Identity = 58/177 (32.77%), Postives = 92/177 (51.98%), Query Frame = 3
Query:  177 KVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKD-SQGEEVIKPYTPTTLDSDVGHFELVIKMY---PQ---GRMSHHFREMRVGDYLAVKGPKGRFRYQPG----------QVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +V L  + + +  L K+  +S +   F+F+L      +GLP GQH+  R +D +  E +I+ YTP +  SD G  +++IK+Y   PQ   G M+     + +G ++  KGP G+F Y             +VR F M  GGSGITP+ QV RA+++  +  T   +   N +  DIL
Sbjct:  642 EVFLQAKTWSKAILDKKTSISPDTKIFSFKLNHEAQKIGLPTGQHLMMRLRDPATREAIIRSYTPYSDGSDCGRLDILIKIYYDTPQRKGGVMTQALDALPIGHWVDFKGPTGKFVYHGNGLCTINEKERRVRRFIMVCGGSGITPIRQVLRAVIDNPKDTTPCLVFNGNRSVNDIL 818          
The following BLAST results are available for this feature:
BLAST of FC932241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
MCR1_KLULA4.682e-2131.55NADH-cytochrome b5 reductase 2 OS=Kluyveromyces la... [more]
NIA_CICIN1.043e-2035.12Nitrate reductase [NADH] OS=Cichorium intybus GN=N... [more]
MCR1_MAGGR1.043e-2034.76NADH-cytochrome b5 reductase 2 OS=Magnaporthe gris... [more]
MCR1_NEUCR2.324e-2033.55NADH-cytochrome b5 reductase 2 OS=Neurospora crass... [more]
MCR1B_VANPO6.761e-2033.91NADH-cytochrome b5 reductase 2-B OS=Vanderwaltozym... [more]
NIA_EMENI1.153e-1932.97Nitrate reductase [NADPH] OS=Emericella nidulans G... [more]
NIA_ASPNG7.475e-1932.97Nitrate reductase [NADPH] OS=Aspergillus niger GN=... [more]
NIA_PHYIN3.710e-1836.31Nitrate reductase [NADPH] OS=Phytophthora infestan... [more]
NIA_LEPMC2.036e-1632.42Nitrate reductase [NADPH] OS=Leptosphaeria maculan... [more]
NIA_FUSOX2.036e-1632.77Nitrate reductase [NADPH] OS=Fusarium oxysporum GN... [more]

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Properties
Property NameValue
Genbank descriptionC34206C01EF PostHarveN Citrus clementina cDNA clone C34206C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932241 ID=FC932241; Name=FC932241; organism=Citrus clementina; type=EST; length=658bp
TATATACATATATTGACAAATCCGAGGCTTTTAGTTCTTCTATTGGTGAG
CTTTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAGATGTTCA
GCTTCTCGTTGGTGGAGCTGTGGCTGTTCTGGCCATTGCTGTTGGTGCTG
CTTACTTGTATTCCTCTAAGAAGCCCAAAGTTTCCTTAGATCCTGAGAAT
TTCAAGGAGTTTAAGCTTGTCAAGCGATTACAGCTGAGCCATAATGTGGC
AAAGTTCACATTTGAACTCCCAACGCCTACATCGGTTTTGGGTCTTCCAA
TTGGACAACATATAAGTTGCAGGGGCAAGGATAGTCAGGGTGAAGAGGTT
ATTAAACCATATACCCCAACCACATTGGATTCTGATGTTGGTCATTTTGA
ATTGGTTATTAAGATGTACCCCCAAGGAAGGATGTCACACCATTTCCGTG
AGATGCGTGTTGGTGATTATCTTGCCGTGAAGGGACCCAAGGGTCGATTC
AGGTATCAACCTGGCCAGGTCAGAGCATTTGGGATGACTGCAGGAGGTTC
TGGCATCACTCCAATGTTCCAAGTTACTAGAGCCATATTAGAGAAAACCC
AATGACAGACAAAGGTGCACCTCATTTATGCCAATGTTACATATGANGAC
ATTCTTTT
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