FC932241

Overview
NameFC932241
Unique NameFC932241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA_BEABA (Nitrate reductase [NADPH] OS=Beauveria bassiana GN=NIA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.535e-16
Identity = 56/176 (31.82%), Postives = 87/176 (49.43%), Query Frame = 3
Query:  180 VSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKD-SQGEEVIKPYTPTTLDSDVGHFELVIKMY------PQGRMSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            V L P+ + +  L  +  +S +   F+F L      +GLP GQH+  R +D +  E VI+ YTP +     G  +++IK+Y      P G+M+     + +G ++ +KGP G+F Y              VR F M   GSG+TP+FQV RA+    Q  T+  ++  N    DIL
Sbjct:  633 VFLQPKYWSKAILETKTDVSSDSKIFSFRLDHAAQSIGLPTGQHLLVRLRDPATREAVIRAYTPLSETHAKGQLDILIKIYRDVPGQPGGKMTQALDSIPLGHFVDIKGPVGKFEYLGKGHCTVSGTSRHVRRFVMICAGSGVTPIFQVLRAVTSDAQDGTECLVLDGNRCEKDIL 808          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NB5R5_HUMAN (NADH-cytochrome b5 reductase-like OS=Homo sapiens GN=CYB5RL PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 7.735e-16
Identity = 53/156 (33.97%), Postives = 81/156 (51.92%), Query Frame = 3
Query:  186 LDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDI 653
            L+PE F  F ++   +L+ +  +  F LP   S LGL  GQH+  RG      E+ + YTP +  +  G+FE++IK Y  G MS +    RVGD    +GP G F Y+P Q     + A G+G+ PM  + ++I +    +T V L+    T+  I
Sbjct:   71 LNPETFVAFCIIAMDRLTKDTYRVRFALPG-NSQLGLRPGQHLILRGIVDD-LEIQRAYTPISPANAEGYFEVLIKCYQMGLMSRYVESWRVGDTAFWRGPFGDFFYKPNQYGELLLLAAGTGLAPMVPILQSITDNENDETFVTLVGCFKTFESI 224          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NB5R5_MOUSE (NADH-cytochrome b5 reductase-like OS=Mus musculus GN=Cyb5rl PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14
Identity = 56/172 (32.56%), Postives = 84/172 (48.84%), Query Frame = 3
Query:  156 LYSSKKPKVS------LDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDI 653
            L S K+P  S      L PE F  F +    +++ +     F LP   S LGL  GQH+  RG    G E+ + YTP +  +  G+F+++IK Y  G MS +    R GD    +GP G F Y+P +     M A G+G+ PM  + ++I +    +T V L+    T+  I
Sbjct:   57 LLSGKQPPESQSCSAKLSPETFLAFHISTMEKVTKDTYLVRFTLPG-NSRLGLRPGQHLILRGV-VDGLEIQRAYTPISPVTAEGYFDVLIKCYRTGLMSQYVESWRTGDTAFWRGPFGSFLYEPKKYGELLMLAAGTGLAPMVPILQSITDDEDDETFVTLVGCFKTFEGI 226          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NB5R4_XENTR (Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN=cyb5r4 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.488e-14
Identity = 50/163 (30.67%), Postives = 83/163 (50.92%), Query Frame = 3
Query:  201 FKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTL----DSDVGHF------ELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRF-RYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +++ +L  +  +++N   F  +LP     L +P+G HI  +   S G +++KPYTP       D+    F       L+IK+YP G ++ H   + VGDY+++  P+G F  +Q   V    + A G+GITPM ++ + +L       K  LI+ N    DIL
Sbjct:  277 YRKCRLASKTDINYNTKLFCVQLPQGCH-LQVPVGHHIYLKMNIS-GVDIVKPYTPVASCLLPDAQYSTFCNKQCLYLMIKIYPNGSITPHLENLTVGDYISISNPQGTFSSFQIENVMDVFLVAAGTGITPMIRLLQHVLTCVSSLRKAKLIFFNKKEEDIL 437          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NB5R4_RAT (Cytochrome b5 reductase 4 OS=Rattus norvegicus GN=Cyb5r4 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.488e-14
Identity = 49/164 (29.88%), Postives = 86/164 (52.44%), Query Frame = 3
Query:  201 FKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFE-----------LVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQ-VRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +++ +L+ +  ++H+   F   LP P++ L +P+GQH+  +     G E++KPYTP + +S +  F+            +IK+YP G  +     +++GD+++V GP+G F+    Q V    + A G+G TPM  V    L       KV L++ N T  DI+
Sbjct:  274 YRQCQLISKEDVTHDTRLFCLMLP-PSTHLQVPVGQHVYLK-LSVTGAEIVKPYTPVS-ESLLSDFKEPVLSPNKYIYFLIKIYPAGLFTPELDRLQIGDFVSVSGPEGNFKVSKLQEVEDLFLLAAGTGFTPMVTVLNHALTHMSSLRKVKLMFFNKTEDDII 434          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NB5R4_MOUSE (Cytochrome b5 reductase 4 OS=Mus musculus GN=Cyb5r4 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14
Identity = 49/164 (29.88%), Postives = 84/164 (51.22%), Query Frame = 3
Query:  201 FKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFE-----------LVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQ-VRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            ++  +L+ +  ++H+       LP P++ L +P+GQH+  +     G E++KPYTP + DS +  F+            +IK+YP G  +     +++GD+++V GP+G F+    Q V    + A G+G TPM  V    L       KV L++ N T  DI+
Sbjct:  290 YRRCQLISKEDVTHDTRLLCLMLP-PSTHLQVPVGQHVYLK-LSVTGAEIVKPYTPVS-DSLLSDFKEPVLSPNKYIYFLIKIYPAGLFTPELDRLQIGDFISVSGPEGNFKVSKLQEVEDLFLLAAGTGFTPMVTVLNYALSHMSSLRKVKLMFFNKTEDDII 450          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NB5R4_BOVIN (Cytochrome b5 reductase 4 OS=Bos taurus GN=CYB5R4 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.244e-14
Identity = 51/164 (31.10%), Postives = 85/164 (51.83%), Query Frame = 3
Query:  201 FKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFE-----------LVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRY-QPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +++ +LV +  ++H+   F   LP P++ L +P+GQH+  R     G E++KPYTP   DS    F+            +IK+YP G  +    ++++GDY++V  P+G F   Q  ++    + A G+G TPM +V    L       KV L++ N T  DI+
Sbjct:  274 YRKCQLVSKEDVTHDTKLFCLMLP-PSTHLEVPVGQHVYLR-LPITGTEIVKPYTPVC-DSLFSEFKEPVLPNNIYIYFLIKIYPAGFFTPELDQLQIGDYVSVSNPEGNFIISQLQELEDLFLLAAGTGFTPMVKVLNYALTNIPSLRKVKLMFFNKTEDDII 434          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NB5R4_HUMAN (Cytochrome b5 reductase 4 OS=Homo sapiens GN=CYB5R4 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.693e-13
Identity = 47/164 (28.66%), Postives = 85/164 (51.83%), Query Frame = 3
Query:  201 FKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFE-----------LVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQ-VRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +++ +L+ +  ++H+   F   LP P++ L +PIGQH+  +     G E++KPYTP +  S +  F+            +IK+YP G  +     +++GD+++V  P+G F+    Q +    + A G+G TPM ++    L       KV L++ N T  DI+
Sbjct:  275 YRKCQLISKEDVTHDTRLFCLMLP-PSTHLQVPIGQHVYLK-LPITGTEIVKPYTPVS-GSLLSEFKEPVLPNNKYIYFLIKIYPTGLFTPELDRLQIGDFVSVSSPEGNFKISKFQELEDLFLLAAGTGFTPMVKILNYALTDIPSLRKVKLMFFNKTEDDII 435          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NB5R4_DANRE (Cytochrome b5 reductase 4 OS=Danio rerio GN=cyb5r4 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.129e-13
Identity = 50/162 (30.86%), Postives = 84/162 (51.85%), Query Frame = 3
Query:  201 FKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYT--------PTTLDSDVGH-FELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQP-GQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            ++E  L+ +  ++HN      +LP   S + +P+G+H+  +    QG +V+KPYT        P+   ++VG    L+IK+YP G ++ H   + +G  L+V GP+G F  +    V    M A G+G TPM ++ R  L+      K+ L++ N    DIL
Sbjct:  283 YRECVLLSKTDVTHNTQLLRLQLPRG-SRMQVPVGRHVYLK-TSVQGTDVVKPYTAVDQMLIPPSQSSAEVGSDIHLMIKVYPDGVLTPHIANLPIGASLSVGGPEGSFTLRVLRDVTHLYMLAAGTGFTPMARLIRLALQDFTVIRKMKLMFFNRQERDIL 442          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA_NEUCR (Nitrate reductase [NADPH] OS=Neurospora crassa GN=nit-3 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.156e-11
Identity = 51/180 (28.33%), Postives = 84/180 (46.67%), Query Frame = 3
Query:  180 VSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKD--SQGEEVIKPYTPTTLDS-DVGHFELVIKMY--------PQGRMSHHFREMRVGDYLAVKGPKGRFRYQ----------PGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            + L  + +    L  +  +S +   F F L  P   +GLP+GQH+  R  D     E +I+ YTP +  + + G   +++K+Y          G+M+     + +G  +  KGP G+F YQ            +V+ F M  GGSG+TP++QV  A+    Q  T+  ++  N    DIL
Sbjct:  716 IFLQSKTWNSAILTFKESVSPDTKIFHFALSHPAQSIGLPVGQHLMMRLPDPAKPTESIIRAYTPISDGTLERGTLRVLVKIYYASPTEDIKGGQMTQALDALALGKAVEFKGPVGKFVYQGRGVCSVNGRERKVKRFVMVCGGSGVTPIYQVAEAVAVDDQDGTECLVLDGNRVEGDIL 895          
The following BLAST results are available for this feature:
BLAST of FC932241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
NIA_BEABA4.535e-1631.82Nitrate reductase [NADPH] OS=Beauveria bassiana GN... [more]
NB5R5_HUMAN7.735e-1633.97NADH-cytochrome b5 reductase-like OS=Homo sapiens ... [more]
NB5R5_MOUSE1.459e-1432.56NADH-cytochrome b5 reductase-like OS=Mus musculus ... [more]
NB5R4_XENTR2.488e-1430.67Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN... [more]
NB5R4_RAT2.488e-1429.88Cytochrome b5 reductase 4 OS=Rattus norvegicus GN=... [more]
NB5R4_MOUSE4.244e-1429.88Cytochrome b5 reductase 4 OS=Mus musculus GN=Cyb5r... [more]
NB5R4_BOVIN4.244e-1431.10Cytochrome b5 reductase 4 OS=Bos taurus GN=CYB5R4 ... [more]
NB5R4_HUMAN4.693e-1328.66Cytochrome b5 reductase 4 OS=Homo sapiens GN=CYB5R... [more]
NB5R4_DANRE6.129e-1330.86Cytochrome b5 reductase 4 OS=Danio rerio GN=cyb5r4... [more]
NIA_NEUCR1.156e-1128.33Nitrate reductase [NADPH] OS=Neurospora crassa GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34206C01EF PostHarveN Citrus clementina cDNA clone C34206C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932241 ID=FC932241; Name=FC932241; organism=Citrus clementina; type=EST; length=658bp
TATATACATATATTGACAAATCCGAGGCTTTTAGTTCTTCTATTGGTGAG
CTTTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAGATGTTCA
GCTTCTCGTTGGTGGAGCTGTGGCTGTTCTGGCCATTGCTGTTGGTGCTG
CTTACTTGTATTCCTCTAAGAAGCCCAAAGTTTCCTTAGATCCTGAGAAT
TTCAAGGAGTTTAAGCTTGTCAAGCGATTACAGCTGAGCCATAATGTGGC
AAAGTTCACATTTGAACTCCCAACGCCTACATCGGTTTTGGGTCTTCCAA
TTGGACAACATATAAGTTGCAGGGGCAAGGATAGTCAGGGTGAAGAGGTT
ATTAAACCATATACCCCAACCACATTGGATTCTGATGTTGGTCATTTTGA
ATTGGTTATTAAGATGTACCCCCAAGGAAGGATGTCACACCATTTCCGTG
AGATGCGTGTTGGTGATTATCTTGCCGTGAAGGGACCCAAGGGTCGATTC
AGGTATCAACCTGGCCAGGTCAGAGCATTTGGGATGACTGCAGGAGGTTC
TGGCATCACTCCAATGTTCCAAGTTACTAGAGCCATATTAGAGAAAACCC
AATGACAGACAAAGGTGCACCTCATTTATGCCAATGTTACATATGANGAC
ATTCTTTT
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