FC932241

Overview
NameFC932241
Unique NameFC932241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5076 contig Ccv1_Contig5076:280..937. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA2_PHAVU (Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris GN=NIA2 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.652e-24
Identity = 67/179 (37.43%), Postives = 101/179 (56.42%), Query Frame = 3
Query:  180 VSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHIS-CRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            V+L+P      KLV +  +SH+V  F FE+P+   +LGLP+G+HI  C   D  G+  ++ YTPT+   +VG F+L+IK+Y +         G MS +   + +G  L VKGP G   Y          +    +   M AGG+GITP++QV +AIL+  +  T++H++YAN T  DIL
Sbjct:  629 VALNPRQKIPCKLVSKTSISHDVRLFRFEMPSKNQLLGLPVGKHIFLCATID--GKLCMRAYTPTSSVEEVGFFDLLIKVYFKDVHPKFPNGGLMSQYLESLSIGSMLDVKGPLGHIEYTGRGNFTVNGKSRFAKRLAMLAGGTGITPIYQVAQAILKDPEDLTEMHVVYANRTEDDIL 805          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_YEAST (NADH-cytochrome b5 reductase 2 OS=Saccharomyces cerevisiae GN=MCR1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.464e-24
Identity = 55/160 (34.38%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  177 KVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            KV    + + +  + K  + SH+  +FTF+LPT  S +GL +   +  +    +G  V++PYTP +  S  GHF+LV+K Y  G+M+ H   ++  D ++ KGP  ++++QP Q ++  +   G+GI P++Q+   I+E    +TKV+L+Y N T  DIL
Sbjct:   45 KVFKGDDKWIDLPISKIEEESHDTRRFTFKLPTEDSEMGLVLASALFAKFVTPKGSNVVRPYTPVSDLSQKGHFQLVVKHYEGGKMTSHLFGLKPNDTVSFKGPIMKWKWQPNQFKSITLLGAGTGINPLYQLAHHIVENPNDKTKVNLLYGNKTPQDIL 204          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_YEAS7 (NADH-cytochrome b5 reductase 2 OS=Saccharomyces cerevisiae (strain YJM789) GN=MCR1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.464e-24
Identity = 55/160 (34.38%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  177 KVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            KV    + + +  + K  + SH+  +FTF+LPT  S +GL +   +  +    +G  V++PYTP +  S  GHF+LV+K Y  G+M+ H   ++  D ++ KGP  ++++QP Q ++  +   G+GI P++Q+   I+E    +TKV+L+Y N T  DIL
Sbjct:   45 KVFKGDDKWIDLPISKIEEESHDTRRFTFKLPTEDSEMGLVLASALFAKFVTPKGSNVVRPYTPVSDLSQKGHFQLVVKHYEGGKMTSHLFGLKPNDTVSFKGPIMKWKWQPNQFKSITLLGAGTGINPLYQLAHHIVENPNDKTKVNLLYGNKTPQDIL 204          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_BOTFB (NADH-cytochrome b5 reductase 2 OS=Botryotinia fuckeliana (strain B05.10) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.464e-24
Identity = 60/155 (38.71%), Postives = 88/155 (56.77%), Query Frame = 3
Query:  195 ENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEE-VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            + F   KL     ++HN  KF FELP    V GL +   +  + K  + ++  I+PYTPT+ +S+ G  +L++K YP G MS H  +M  G  L  KGP  ++ +   +     + AGG+GITPM+Q+ RAI      +TKV L++ANVT  DIL
Sbjct:   95 QGFISLKLDSVENINHNTKKFRFELPESDQVSGLQVASALLTKFKGPEMQKPAIRPYTPTSDESEQGFIDLLVKKYPNGVMSEHMHDMVPGQRLDFKGPIPKYPWSANKHDHIALIAGGTGITPMYQLARAIFNNPADKTKVTLVFANVTEEDIL 249          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: YMM5_YEAST (Uncharacterized oxidoreductase YML125C OS=Saccharomyces cerevisiae GN=YML125C PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.524e-24
Identity = 59/166 (35.54%), Postives = 93/166 (56.02%), Query Frame = 3
Query:  159 YSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            YS+ K + SL P+ +   +L  +  +S N A + F+L T    L +P G H++ R     G++ ++ Y P +   + G+ +LV+K Y  G++S +F  +  GD +  KGP G   Y+P   +  G+ AGGSGITP+ Q+   I+   +  TKV L+YAN T  DIL
Sbjct:   58 YSAYKRRRSLYPDRWTSLELEDQTIISKNTALYRFKLKTRLESLDIPAGHHVAVR-VPIDGKQEVRYYNPISSKLESGYLDLVVKAYVDGKVSKYFAGLNSGDTVDFKGPIGTLNYEPNSSKHLGIVAGGSGITPVLQILNEIITVPEDLTKVSLLYANETENDIL 222          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_ASPTN (NADH-cytochrome b5 reductase 2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=mcr1 PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 4.524e-24
Identity = 56/154 (36.36%), Postives = 89/154 (57.79%), Query Frame = 3
Query:  195 ENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            + + + KL +   L+HN  +F FE     +V GL +   +  + K   G+ V++PYTP + +S  G  +LV+K+YP G MS H   M V   L  KGP  ++ ++  + +   + AGG+GITPM+Q+ R I +  + +TKV L+Y NV+  DIL
Sbjct:   69 QGWVDLKLSEIEVLNHNTKRFRFEFEDKEAVSGLNVASALLTKFKPEGGKAVLRPYTPVSDESQPGFLDLVVKVYPNGPMSEHLHSMNVDQRLEFKGPLPKYPWEANKHQHICLIAGGTGITPMYQLARHIFKNPEDKTKVTLVYGNVSEQDIL 222          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA1_MAIZE (Nitrate reductase [NADH] (Fragment) OS=Zea mays PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 5.909e-24
Identity = 63/168 (37.50%), Postives = 97/168 (57.74%), Query Frame = 3
Query:  213 KLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAIL-EKTQ*QTKVHLIYANVTYXDIL 656
            +LV + +LS +V  F F LP+P  VLGLPIG+HI       +G+  ++ YTPT++  ++GHF+L++K+Y +         G M+ +   + VG Y+ VKGP G   Y          +        M  GGSGITPM+Q+ +A+L ++ +  T++HL+YAN T  DIL
Sbjct:  367 RLVGKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCA-SIEGKLCMRAYTPTSMVDEIGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYTGRGSFVINGKQRHASRLAMICGGSGITPMYQIIQAVLRDQPEDHTEMHLVYANRTEDDIL 533          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA3_MAIZE (Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.717e-24
Identity = 70/183 (38.25%), Postives = 105/183 (57.38%), Query Frame = 3
Query:  174 PKVSL-DPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHI-SCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMY---------PQGRMSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAIL-EKTQ*QTKVHLIYANVTYXDIL 656
            P ++L +P      +LV R  LS +V  F F LP+   VLGLP+G+HI  C   D  G+  ++ YTPT+   +VGHF+L++K+Y           GRM+ +   + VG ++ VKGP G   Y          +P +     M AGGSGITP++QV +A+L ++ + +T++HL+YAN T  DIL
Sbjct:  622 PVIALSNPREKVPCQLVARTVLSRDVRLFRFALPSSGQVLGLPVGKHIFVCASID--GKLCMRAYTPTSSVDEVGHFDLLVKVYFRNENTKFPDGGRMTQYLDSLPVGAHVDVKGPLGHVEYVGRGGFVIDGKPRKAGRLAMVAGGSGITPIYQVIQAVLRDQPEDKTEMHLVYANRTEDDIL 802          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.717e-24
Identity = 67/179 (37.43%), Postives = 100/179 (55.87%), Query Frame = 3
Query:  180 VSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHIS-CRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGR---------MSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            V+L+P      KL+ +  +SH+V  F F LP+   ++GLP+G+HI  C   D +    ++ YTPT+   +VG+F+LV+K+Y +G          MS H   + +G  L VKGP G   Y          +P       M AGG+GITP++QV RAIL+  +  T++H++YAN T  DIL
Sbjct:  629 VALNPREKIPCKLISKTSISHDVRLFRFALPSDDLLMGLPVGKHIFLCATVDEK--LCMRAYTPTSSVHEVGYFDLVVKVYFKGVHPKFPTGGIMSQHLDSLPIGSVLDVKGPLGHIVYTGRGNFLVHGKPRFATRLAMLAGGTGITPIYQVVRAILKDPEDCTEMHVVYANRTEDDIL 805          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: MCR1_CANGA (NADH-cytochrome b5 reductase 2 OS=Candida glabrata GN=MCR1 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.717e-24
Identity = 55/164 (33.54%), Postives = 96/164 (58.54%), Query Frame = 3
Query:  165 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            ++ PKV +    + + +L K ++ SH+  +F F+LPT  SV GL +   +  +    +G  VI+PYTP +  S+ G+ E VIK Y  G+M+ H  +++  D LA +GP  +++++P       +  GG+GITP++Q+   I +  + +TK++L Y + T  DIL
Sbjct:   38 NENPKVFIGDRKWIDLELEKIIEESHDTKRFFFKLPTDDSVSGLTLASAVLTKFMTPKGNPVIRPYTPVSDLSEKGYIEFVIKHYEGGKMTDHLFQLKPKDTLAFQGPIPKWQWKPNSFDTITLLGGGTGITPLYQLVHHITQNKEDKTKINLFYGSKTPSDIL 201          
The following BLAST results are available for this feature:
BLAST of FC932241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
NIA2_PHAVU2.652e-2437.43Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris G... [more]
MCR1_YEAST3.464e-2434.38NADH-cytochrome b5 reductase 2 OS=Saccharomyces ce... [more]
MCR1_YEAS73.464e-2434.38NADH-cytochrome b5 reductase 2 OS=Saccharomyces ce... [more]
MCR1_BOTFB3.464e-2438.71NADH-cytochrome b5 reductase 2 OS=Botryotinia fuck... [more]
YMM5_YEAST4.524e-2435.54Uncharacterized oxidoreductase YML125C OS=Saccharo... [more]
MCR1_ASPTN4.524e-2436.36NADH-cytochrome b5 reductase 2 OS=Aspergillus terr... [more]
NIA1_MAIZE5.909e-2437.50Nitrate reductase [NADH] (Fragment) OS=Zea mays PE... [more]
NIA3_MAIZE7.717e-2438.25Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1[more]
NIA2_SOYBN7.717e-2437.43Inducible nitrate reductase [NADH] 2 OS=Glycine ma... [more]
MCR1_CANGA7.717e-2433.54NADH-cytochrome b5 reductase 2 OS=Candida glabrata... [more]

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Properties
Property NameValue
Genbank descriptionC34206C01EF PostHarveN Citrus clementina cDNA clone C34206C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932241 ID=FC932241; Name=FC932241; organism=Citrus clementina; type=EST; length=658bp
TATATACATATATTGACAAATCCGAGGCTTTTAGTTCTTCTATTGGTGAG
CTTTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAGATGTTCA
GCTTCTCGTTGGTGGAGCTGTGGCTGTTCTGGCCATTGCTGTTGGTGCTG
CTTACTTGTATTCCTCTAAGAAGCCCAAAGTTTCCTTAGATCCTGAGAAT
TTCAAGGAGTTTAAGCTTGTCAAGCGATTACAGCTGAGCCATAATGTGGC
AAAGTTCACATTTGAACTCCCAACGCCTACATCGGTTTTGGGTCTTCCAA
TTGGACAACATATAAGTTGCAGGGGCAAGGATAGTCAGGGTGAAGAGGTT
ATTAAACCATATACCCCAACCACATTGGATTCTGATGTTGGTCATTTTGA
ATTGGTTATTAAGATGTACCCCCAAGGAAGGATGTCACACCATTTCCGTG
AGATGCGTGTTGGTGATTATCTTGCCGTGAAGGGACCCAAGGGTCGATTC
AGGTATCAACCTGGCCAGGTCAGAGCATTTGGGATGACTGCAGGAGGTTC
TGGCATCACTCCAATGTTCCAAGTTACTAGAGCCATATTAGAGAAAACCC
AATGACAGACAAAGGTGCACCTCATTTATGCCAATGTTACATATGANGAC
ATTCTTTT
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