FC932254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932254 vs. ExPASy Swiss-Prot
Match: PAP3_ORYSJ (Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP3 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24 Identity = 57/121 (47.11%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 349 PKEVTEIDN-------LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQKLIRFAGPLATTS 690 P V E DN LK+ LVD+ YG+D G A+SE R E++EL+TQLEA NPTP P +A LL WIL+YT++S L P+L+ G PL +V+EISQ ID+ + T+ + P A+ S Sbjct: 133 PPPVPEEDNEEERREELKRCLVDTVYGSDLGFRASSEVRGEVLELVTQLEATNPTPEPVQATHLLAGNWILIYTAYSELLPILAVGAAPLFKVDEISQEIDTNSMTIVNASTISSPFASFS 253
BLAST of FC932254 vs. ExPASy Swiss-Prot
Match: PAP3_ARATH (Probable plastid-lipid-associated protein 3, chloroplastic OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.890e-23 Identity = 53/105 (50.48%), Postives = 70/105 (66.67%), Query Frame = 1 Query: 376 LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQKLIRFAGPLATTS 690 LK+ L DS YGT+ G A SE RAE++EL+ QLEA NPTPAP E LL+ W+L+YT+FS L PLL+ G+ PL +V+ ISQ+ID+ N + + P A S Sbjct: 153 LKRCLADSVYGTELGFKAGSEVRAEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAFSELIPLLAAGSTPLLKVKSISQSIDTNNLIIDNSTTLSSPFADFS 257
BLAST of FC932254 vs. ExPASy Swiss-Prot
Match: PAP3_BRACM (Plastid lipid-associated protein 3, chloroplastic OS=Brassica campestris GN=PAP3 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.940e-22 Identity = 49/105 (46.67%), Postives = 71/105 (67.62%), Query Frame = 1 Query: 376 LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQKLIRFAGPLATTS 690 LK+ L D+ YGT+ G A SE RAE++E++ QLEA NPT AP E LL+ W+L+YT+FS L PLL+ G+ PL +V+ ISQ+ID+++ ++ + P A S Sbjct: 137 LKRCLADTVYGTELGFRAGSEVRAEVLEIVNQLEALNPTQAPVENPELLDGNWVLLYTAFSELLPLLAAGSTPLLKVKSISQSIDTKSLSIDNSTTLSSPFADFS 241 The following BLAST results are available for this feature:
BLAST of FC932254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932254 ID=FC932254; Name=FC932254; organism=Citrus clementina; type=EST; length=692bpback to top |