FC932255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_CHLMU (Fumarate hydratase class II OS=Chlamydia muridarum GN=fumC PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.052e-28 Identity = 71/127 (55.91%), Postives = 84/127 (66.14%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEK-IVHPNDHVNRSQSSNDTFPTVMHIAA 375 RS F G +E MP +++A +KKCAAK N + LD I+ A+ E+ G L +HFPL VWQTGSGTQSNMN NEVIAN A + G + G K VHPNDHVN+SQSSND FPT MHIAA Sbjct: 25 RSKNFFSYG--KELMPIEVIQALVKIKKCAAKANGDLQCLDAKRRDMIVAASDEILSGGLEEHFPLKVWQTGSGTQSNMNVNEVIANLAIKRHGGELGSKNPVHPNDHVNKSQSSNDVFPTAMHIAA 149
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_SYNPX (Fumarate hydratase class II OS=Synechococcus sp. (strain WH8102) GN=fumC PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.795e-28 Identity = 65/129 (50.39%), Postives = 87/129 (67.44%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL--DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAAA 378 RSL NF IG +++P ++ A +K+C A VN +GL D + I +A Q + G+ +DHFPL VWQTGSGTQ+NMN NEVI+N AA+ G G + +HPNDH+NRSQS+ND FP +H+AAA Sbjct: 29 RSLNNFAIG--HQKIPAELIHALARIKQCCAAVNGRHGLLNDQQVA-LIERAGQAIQTGQQDDHFPLSVWQTGSGTQTNMNVNEVISNLAAQESGENLGSHRPLHPNDHINRSQSTNDVFPAAIHVAAA 154
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_LISMF (Fumarate hydratase class II OS=Listeria monocytogenes serotype 4b (strain F2365) GN=fumC PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.795e-28 Identity = 73/126 (57.94%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAA 375 RS +NF IG MP I+ AF LKK AKVN G L AI Q ++ +G+L++HFPLVVWQTGSGTQSNMN NEVIA+ A L GE +HPND VN SQSSNDTFPT MHIAA Sbjct: 26 RSKRNFAIGDNP--MPIEIIYAFAQLKKATAKVNAAEGKLSEEKAIAIGQVCDQIIQGELDEHFPLVVWQTGSGTQSNMNVNEVIAHVANLTL----GEGQIHPNDDVNMSQSSNDTFPTAMHIAA 145
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_STRCO (Fumarate hydratase class II OS=Streptomyces coelicolor GN=fumC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.061e-28 Identity = 68/126 (53.97%), Postives = 86/126 (68.25%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAA 375 R+++NF + G+R + + A +K AAKVN E G LD + AI +AA EVAEGK ++HFP+ V+QTGSGT SNMN NEV+A A E LG + VHPNDHVN SQSSND FP+ +HIAA Sbjct: 28 RAVENFPVSGQR--IERAHIEALARIKSAAAKVNAELGVLDEDVAGAIQEAAGEVAEGKWDEHFPVDVFQTGSGTSSNMNTNEVVATLATERLG-----RDVHPNDHVNASQSSNDVFPSSIHIAA 146
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_STAES (Fumarate hydratase class II OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fumC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.061e-28 Identity = 64/125 (51.20%), Postives = 83/125 (66.40%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIA 372 RS +NF +G +E MP ++ F LK+ AA N E G L AI+ A + G+L++HFPLV+WQTGSGTQSNMN NEV++ A E L ++ +HPND VN+SQSSNDTFPT MH+A Sbjct: 27 RSKRNFPVG--KEHMPIQVIYGFAQLKRGAALANHELGKLSDEKKNAIVYACDRILNGELDNHFPLVIWQTGSGTQSNMNVNEVVSYVANEYLKKHGSKETIHPNDDVNKSQSSNDTFPTAMHVA 149
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_STAEQ (Fumarate hydratase class II OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fumC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.061e-28 Identity = 64/125 (51.20%), Postives = 83/125 (66.40%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIA 372 RS +NF +G +E MP ++ F LK+ AA N E G L AI+ A + G+L++HFPLV+WQTGSGTQSNMN NEV++ A E L ++ +HPND VN+SQSSNDTFPT MH+A Sbjct: 27 RSKRNFPVG--KEHMPIQVIYGFAQLKRGAALANHELGKLSDEKKNAIVYACDRILNGELDNHFPLVIWQTGSGTQSNMNVNEVVSYVANEYLKKHGSKETIHPNDDVNKSQSSNDTFPTAMHVA 149
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_LISMO (Fumarate hydratase class II OS=Listeria monocytogenes GN=fumC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.061e-28 Identity = 73/126 (57.94%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAA 375 RS +NF IG MP I+ AF LKK AKVN G L AI Q ++ +G+L++HFPLVVWQTGSGTQSNMN NEVIA+ A L GE +HPND VN SQSSNDTFPT MHIAA Sbjct: 26 RSKRNFAIGDNP--MPIEIIYAFAQLKKATAKVNAAEGKLAEEKAIAIGQVCDQIIQGELDEHFPLVVWQTGSGTQSNMNVNEVIAHVANLTL----GEGQIHPNDDVNMSQSSNDTFPTAMHIAA 145
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_BLOFL (Fumarate hydratase class II OS=Blochmannia floridanus GN=fumC PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.222e-28 Identity = 65/125 (52.00%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 4 SLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAA 375 SL+ F+I E+MP +++A +K+ +A+VN + L D +AI+ A E+ G + FPL VWQTGSGTQSNMN NEV+ANRA E+L + +VHPNDHVN+SQSSND FP+ MHIAA Sbjct: 14 SLKFFNIS--TEKMPWELIKALAQIKRVSAQVNYDLKLLDYERSQAIIAAVDEILSGNHKNEFPLSVWQTGSGTQSNMNMNEVLANRANELLRKNQINIVVHPNDHVNKSQSSNDVFPSAMHIAA 136
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_STAS1 (Fumarate hydratase class II OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=fumC PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.591e-27 Identity = 66/125 (52.80%), Postives = 83/125 (66.40%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIA 372 RS +NF +G +ERMP +V F LK+ AA N G L A AI+ A V +L++HFPLVVWQTGSGTQSNMN NEV++ A L + ++ +HPND VN+SQSSNDTFPT MH+A Sbjct: 27 RSKRNFPVG--KERMPIEVVYGFAQLKRGAALANHALGKLSDAKKDAIVYACDRVLNKELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANTYLKEQGIDESIHPNDDVNKSQSSNDTFPTAMHVA 149
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_PROMM (Fumarate hydratase class II OS=Prochlorococcus marinus (strain MIT 9313) GN=fumC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.385e-27 Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIAA 375 RSL NF I +RMP ++ A ++K+ AA VN G LD I++AA VA G +D FPL VWQTGSGT +NMN NEVI+N A++ G + VHPNDHVNRSQS+ND FPT +HIAA Sbjct: 30 RSLLNFAIS--TDRMPVELIHALALIKQAAASVNCRLGVLDEVQRDQIIKAASAVASGLHDDQFPLRVWQTGSGTHTNMNVNEVISNLASQANDEPLGSHRPVHPNDHVNRSQSTNDAFPTAIHIAA 154 The following BLAST results are available for this feature:
BLAST of FC932255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932255 ID=FC932255; Name=FC932255; organism=Citrus clementina; type=EST; length=379bpback to top |