FC932255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: ASPA_BACSU (Aspartate ammonia-lyase OS=Bacillus subtilis GN=ansB PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 4.887e-26 Identity = 65/126 (51.59%), Postives = 86/126 (68.25%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKI-VHPNDHVNRSQSSNDTFPTVMHIA 372 R+ +NF I G + + E ++ A I+KK AA NM+ L IG+AI+QAA E+ EGK +D F + Q G+GT NMNANEVI NRA EI+GHK+G+ I + PN HVN SQS+ND FPT +HI+ Sbjct: 32 RASENFPITGYK--IHEEMINALAIVKKAAALANMDVKRLYEGIGQAIVQAADEILEGKWHDQFIVDPIQGGAGTSMNMNANEVIGNRALEIMGHKKGDYIHLSPNTHVNMSQSTNDVFPTAIHIS 155
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_MYCTU (Fumarate hydratase class II OS=Mycobacterium tuberculosis GN=fumC PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.168e-25 Identity = 65/126 (51.59%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAA 375 R+++NF I G + +RA G+LK A+VN + GL P AI+ AA E+A+G+ +D FP+ V+QTGSGT SNMN NEVIA+ AA +G +HPND VN SQSSNDTFPT HIAA Sbjct: 34 RAVENFPISGRGLERTQ--IRALGLLKGACAQVNSDLGLLAPEKADAIIAAAAEIADGQHDDQFPIDVFQTGSGTSSNMNTNEVIASIAA------KGGVTLHPNDDVNMSQSSNDTFPTATHIAA 151
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_MYCBO (Fumarate hydratase class II OS=Mycobacterium bovis GN=fumC PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.168e-25 Identity = 65/126 (51.59%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGL-DPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAA 375 R+++NF I G + +RA G+LK A+VN + GL P AI+ AA E+A+G+ +D FP+ V+QTGSGT SNMN NEVIA+ AA +G +HPND VN SQSSNDTFPT HIAA Sbjct: 34 RAVENFPISGRGLERTQ--IRALGLLKGACAQVNSDLGLLAPEKADAIIAAAAEIADGQHDDQFPIDVFQTGSGTSSNMNTNEVIASIAA------KGGVTLHPNDDVNMSQSSNDTFPTATHIAA 151
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_PROMA (Fumarate hydratase class II OS=Prochlorococcus marinus GN=fumC PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.682e-24 Identity = 62/126 (49.21%), Postives = 81/126 (64.29%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIA 372 RSL NF IG +MP ++ + +K AA VN G LD I+ A E++ G ++ FPL VWQTGSGTQ+NMN NEVI+N A+ + G+K G + +HPNDHVNRSQS+ND FP + IA Sbjct: 29 RSLINFAIG--HNKMPMKLIYSIVQIKASAAIVNCRLGVLDKQRKNFILNACNEISNGMHDEQFPLSVWQTGSGTQTNMNVNEVISNIASHLNGNKLGSHEPLHPNDHVNRSQSTNDVFPAAIQIA 152
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_CORGL (Fumarate hydratase class II OS=Corynebacterium glutamicum GN=fumC PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.974e-24 Identity = 63/126 (50.00%), Postives = 79/126 (62.70%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAA 375 R+++NF I G + +RA G+LK A+VN + G LD AI+ A +E+A GK + FP+ V+QTGSGT SNMN NEVIA+ A K VHPNDHVN QSSNDTFPT H+AA Sbjct: 34 RAVENFPISGRGLESAQ--IRAMGLLKAACAQVNKDSGALDAEKADAIIAAGKEIASGKHDAEFPIDVFQTGSGTSSNMNTNEVIASIA------KANGVEVHPNDHVNMGQSSNDTFPTATHVAA 151
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_XYLFT (Fumarate hydratase class II OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=fumC PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.803e-24 Identity = 61/126 (48.41%), Postives = 80/126 (63.49%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDP-AIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAA 375 R+++NF I G MP+ + A G +K AAKVN E GL P ++ K I AA +VA G+ + FP+ ++QTGSGT SNMNANEVIA L + + +HPNDHVN QSSND PT + I+A Sbjct: 35 RAIENFPISGRS--MPQGFIHALGFIKAAAAKVNAELGLLPKSMAKEIEAAALDVAAGRYDAEFPVDIYQTGSGTSSNMNANEVIAT-----LAMRATKGPIHPNDHVNLGQSSNDVVPTAIRISA 153
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_XYLFA (Fumarate hydratase class II OS=Xylella fastidiosa GN=fumC PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.803e-24 Identity = 61/126 (48.41%), Postives = 80/126 (63.49%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPA-IGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAA 375 R+++NF I G MP+ + A G +K AAKVN E GL P + K I AA +VA G+ + FP+ ++QTGSGT SNMNANEVIA L + ++ +HPNDHVN QSSND PT + I+A Sbjct: 35 RAIENFPISGRS--MPQGFIHALGFIKAAAAKVNAELGLLPKPMAKEIEAAALDVAAGRYDADFPVDIYQTGSGTSSNMNANEVIAT-----LAMRATKEPIHPNDHVNLGQSSNDVVPTAIRISA 153
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_COREF (Fumarate hydratase class II OS=Corynebacterium efficiens GN=fumC PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 1.738e-23 Identity = 63/126 (50.00%), Postives = 79/126 (62.70%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAA 375 R+++NF I G + +RA G+LK A+VN + G LD A AI+ A +E+A GK + FP+ V+QTGSGT SNMN NEVIA+ A K VHPND VN QSSNDTFPT H+AA Sbjct: 34 RAVENFPISGRGLESAQ--IRAMGLLKAACAQVNKDSGALDAAKADAIIAAGKEIATGKHDAEFPIDVFQTGSGTSSNMNTNEVIASIA------KANGTEVHPNDDVNMGQSSNDTFPTATHVAA 151
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC1_PSEAE (Fumarate hydratase class II 1 OS=Pseudomonas aeruginosa GN=fumC1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.627e-23 Identity = 59/127 (46.46%), Postives = 80/127 (62.99%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYG-LDPAIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKIVHPNDHVNRSQSSNDTFPTVMHIAAA 378 R++ NF + G+R MP+ VRA + K AA+ N+ LD +G+AI ++ + HFP+ V+QTGSGT SNMNANEV+A A+ LG K V+PNDHVN QSSND P+ +HI+AA Sbjct: 28 RAVNNFPVSGQR--MPQAFVRALLLAKAAAARANVSLQQLDAPMGEAIADTCLQLLQEDFMQHFPVDVFQTGSGTSSNMNANEVVATLASRRLGGK-----VNPNDHVNCGQSSNDIIPSTIHISAA 147
BLAST of FC932255 vs. ExPASy Swiss-Prot
Match: FUMC_PROMP (Fumarate hydratase class II OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=fumC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.538e-22 Identity = 57/126 (45.24%), Postives = 80/126 (63.49%), Query Frame = 1 Query: 1 RSLQNFDIGGERERMPEPIVRAFGILKKCAAKVNMEYGLDPAIGK-AIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHKRG-EKIVHPNDHVNRSQSSNDTFPTVMHIA 372 RS+ NF IG E +P ++ + ++K+ AA N + GL + K I++A E+ +GK + FPL +WQTGSGTQ+NMN NEVI+N AA G +HPND VN+SQS+NDTFP + I+ Sbjct: 29 RSIINFSIG--EELIPIELIYSLTVIKRAAAISNFKLGLINNVKKDLIIEACTEILDGKHDSQFPLKIWQTGSGTQTNMNINEVISNIAALKTNSGLGSHHPIHPNDDVNKSQSTNDTFPAAIQIS 152 The following BLAST results are available for this feature:
BLAST of FC932255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932255 ID=FC932255; Name=FC932255; organism=Citrus clementina; type=EST; length=379bpback to top |